RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 SRRM2Q9UQ35 2752 aaKnown RBP7.2□□□□□ -1.26
CLPTM1-211ENST00000589347 A0A087WWC5 75 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 TRAV1-1A0A0B4J248 108 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 GAGE12JA6NER3 117 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 C1QBP02746 253 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 SULT1A2P50226 295 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 CRIP1P50238 77 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 GAGE1Q13065 139 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 GAGE4Q13068 117 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 GAGE5Q13069 117 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 GAGE13Q4V321 117 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 DMRTA1Q5VZB9 504 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 PRR27Q6MZM9 219 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 AKAP14Q86UN6 197 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 SLC51BQ86UW2 128 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 SCRT2Q9NQ03 307 aa7.19□□□□□ -1.26
CLPTM1-211ENST00000589347 PDE6DO43924 150 aa7.18□□□□□ -1.26
CLPTM1-211ENST00000589347 TAGLN2P37802 199 aaKnown RBP7.18□□□□□ -1.26
CLPTM1-211ENST00000589347 RPL35P42766 123 aaKnown RBP7.18□□□□□ -1.26
CLPTM1-211ENST00000589347 LAGE3Q14657 143 aa7.18□□□□□ -1.26
CLPTM1-211ENST00000589347 TOR2AQ5JU69 321 aa7.18□□□□□ -1.26
CLPTM1-211ENST00000589347 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.18□□□□□ -1.26
CLPTM1-211ENST00000589347 C11orf52Q96A22 123 aa7.18□□□□□ -1.26
CLPTM1-211ENST00000589347 SFRP2Q96HF1 295 aa7.18□□□□□ -1.26
CLPTM1-211ENST00000589347 TRBV10-1A0A0K0K1A3 114 aa7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 LINC00694P0DN24 101 aa7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 RPL36AP83881 106 aaKnown RBP7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 MEF2BQ02080 365 aaPredicted RBP7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 ZNF56Q15929 161 aa7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 CENPWQ5EE01 88 aa7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 SPANXN1Q5VSR9 72 aa7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 UFSP1Q6NVU6 142 aa7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 KCNIP4Q6PIL6 250 aa7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 RPL36ALQ969Q0 106 aaKnown RBP7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 DAZAP1Q96EP5 407 aaKnown RBP7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 SMIM12Q96EX1 92 aa7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 JPT2Q9H910 190 aa7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 BIN3Q9NQY0 253 aa7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 PGPEP1Q9NXJ5 209 aa7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 URGCP-MRPS24S4R325 110 aa7.17□□□□□ -1.26
CLPTM1-211ENST00000589347 A0A087WWL8 130 aa7.16□□□□□ -1.26
CLPTM1-211ENST00000589347 IGHV3-30P01768 117 aa7.16□□□□□ -1.26
CLPTM1-211ENST00000589347 IGHV3-33P01772 117 aa7.16□□□□□ -1.26
CLPTM1-211ENST00000589347 SMIM17P0DL12 118 aa7.16□□□□□ -1.26
CLPTM1-211ENST00000589347 IGHV3-30-3P0DP02 117 aa7.16□□□□□ -1.26
CLPTM1-211ENST00000589347 IGHV3-30-5P0DP03 117 aa7.16□□□□□ -1.26
CLPTM1-211ENST00000589347 BCL2P10415 239 aa7.16□□□□□ -1.26
CLPTM1-211ENST00000589347 GNG4P50150 75 aa7.16□□□□□ -1.26
CLPTM1-211ENST00000589347 RPS20P60866 119 aaKnown RBP7.16□□□□□ -1.26
CLPTM1-211ENST00000589347 RPL19P84098 196 aaKnown RBP7.16□□□□□ -1.26
CLPTM1-211ENST00000589347 C14orf178Q8N769 122 aaPredicted RBP7.16□□□□□ -1.26
CLPTM1-211ENST00000589347 AP1S3Q96PC3 154 aa7.16□□□□□ -1.26
CLPTM1-211ENST00000589347 MLST8Q9BVC4 326 aa7.16□□□□□ -1.26
CLPTM1-211ENST00000589347 SAMD10Q9BYL1 202 aa7.16□□□□□ -1.26
CLPTM1-211ENST00000589347 A0A087WTM6 91 aa7.15□□□□□ -1.26
CLPTM1-211ENST00000589347 XKRY2A2RUG3 117 aa7.15□□□□□ -1.26
CLPTM1-211ENST00000589347 IBA57-AS1B1ANH7 110 aa7.15□□□□□ -1.26
CLPTM1-211ENST00000589347 SNAI2O43623 268 aa7.15□□□□□ -1.26
CLPTM1-211ENST00000589347 OR5AL1P0C617 328 aa7.15□□□□□ -1.26
CLPTM1-211ENST00000589347 KRTAP10-2P60368 255 aa7.15□□□□□ -1.26
CLPTM1-211ENST00000589347 Q6ZNX1 250 aa7.15□□□□□ -1.26
CLPTM1-211ENST00000589347 TM2D2Q9BX73 214 aa7.15□□□□□ -1.26
CLPTM1-211ENST00000589347 Q9HAA7 133 aa7.15□□□□□ -1.26
CLPTM1-211ENST00000589347 TNFRSF18Q9Y5U5 241 aa7.15□□□□□ -1.26
CLPTM1-211ENST00000589347 RAB4BP61018 213 aa7.14□□□□□ -1.27
CLPTM1-211ENST00000589347 CCL20P78556 96 aa7.14□□□□□ -1.27
CLPTM1-211ENST00000589347 Q6ZSN1 163 aa7.14□□□□□ -1.27
CLPTM1-211ENST00000589347 OR10AG1Q8NH19 301 aa7.14□□□□□ -1.27
CLPTM1-211ENST00000589347 RMI2Q96E14 147 aa7.14□□□□□ -1.27
CLPTM1-211ENST00000589347 MED9Q9NWA0 146 aa7.14□□□□□ -1.27
CLPTM1-211ENST00000589347 VAX2Q9UIW0 290 aa7.14□□□□□ -1.27
CLPTM1-211ENST00000589347 hCG_2014768A0A024R1R8 64 aa7.13□□□□□ -1.27
CLPTM1-211ENST00000589347 TRBV7-3A0A075B6L6 115 aa7.13□□□□□ -1.27
CLPTM1-211ENST00000589347 TRAV8-3A0A0A6YYJ7 113 aa7.13□□□□□ -1.27
CLPTM1-211ENST00000589347 P01737 135 aa7.13□□□□□ -1.27
CLPTM1-211ENST00000589347 PKIAP61925 76 aa7.13□□□□□ -1.27
CLPTM1-211ENST00000589347 NTN5Q8WTR8 489 aaPredicted RBP7.13□□□□□ -1.27
CLPTM1-211ENST00000589347 CHCHD7Q9BUK0 85 aa7.13□□□□□ -1.27
CLPTM1-211ENST00000589347 DERL1Q9BUN8 251 aa7.13□□□□□ -1.27
CLPTM1-211ENST00000589347 TPPP3Q9BW30 176 aa7.13□□□□□ -1.27
CLPTM1-211ENST00000589347 FAT1Q14517 4588 aa7.13□□□□□ -1.27
CLPTM1-211ENST00000589347 UBE2D3P61077 147 aa7.12□□□□□ -1.27
CLPTM1-211ENST00000589347 UBE2D2P62837 147 aa7.12□□□□□ -1.27
CLPTM1-211ENST00000589347 CACNG7P62955 275 aa7.12□□□□□ -1.27
CLPTM1-211ENST00000589347 BLOC1S1P78537 153 aa7.12□□□□□ -1.27
CLPTM1-211ENST00000589347 ELOBQ15370 118 aa7.12□□□□□ -1.27
CLPTM1-211ENST00000589347 TMEM97Q5BJF2 176 aa7.12□□□□□ -1.27
CLPTM1-211ENST00000589347 C9orf62Q8N4C0 152 aa7.12□□□□□ -1.27
CLPTM1-211ENST00000589347 FER1L6-AS1Q8NA97 138 aa7.12□□□□□ -1.27
CLPTM1-211ENST00000589347 OR2D3Q8NGH3 330 aa7.12□□□□□ -1.27
CLPTM1-211ENST00000589347 SSBP4Q9BWG4 385 aaPredicted RBP7.12□□□□□ -1.27
CLPTM1-211ENST00000589347 COX11Q9Y6N1 276 aa7.12□□□□□ -1.27
CLPTM1-211ENST00000589347 A0A087WX48 190 aa7.11□□□□□ -1.27
CLPTM1-211ENST00000589347 RBFOX3A6NFN3 312 aa7.11□□□□□ -1.27
CLPTM1-211ENST00000589347 F5H697 171 aa7.11□□□□□ -1.27
CLPTM1-211ENST00000589347 H7C1H1 209 aa7.11□□□□□ -1.27
CLPTM1-211ENST00000589347 TRGC1P0CF51 173 aa7.11□□□□□ -1.27
CLPTM1-211ENST00000589347 OR10G8Q8NGN5 311 aa7.11□□□□□ -1.27
CLPTM1-211ENST00000589347 IGLV5-52A0A0A0MRZ9 124 aa7.1□□□□□ -1.27
CLPTM1-211ENST00000589347 C19orf71A6NCJ1 209 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms