RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 GAGE5Q13069 117 aa13.02□□□□□ -0.33
CIRBP-221ENST00000589161 GAGE13Q4V321 117 aa13.02□□□□□ -0.33
CIRBP-221ENST00000589161 LINC01556Q5JQF7 62 aa13.02□□□□□ -0.33
CIRBP-221ENST00000589161 FAM74A4Q5TZK3 123 aa13.02□□□□□ -0.33
CIRBP-221ENST00000589161 PRR27Q6MZM9 219 aa13.02□□□□□ -0.33
CIRBP-221ENST00000589161 A0A087WWL8 130 aa13.01□□□□□ -0.33
CIRBP-221ENST00000589161 EREGO14944 169 aa13.01□□□□□ -0.33
CIRBP-221ENST00000589161 PDE6DO43924 150 aa13.01□□□□□ -0.33
CIRBP-221ENST00000589161 RPL19P84098 196 aaKnown RBP13.01□□□□□ -0.33
CIRBP-221ENST00000589161 MEF2BQ02080 365 aaPredicted RBP13.01□□□□□ -0.33
CIRBP-221ENST00000589161 C14orf178Q8N769 122 aaPredicted RBP13.01□□□□□ -0.33
CIRBP-221ENST00000589161 DERL1Q9BUN8 251 aa13.01□□□□□ -0.33
CIRBP-221ENST00000589161 LINC00694P0DN24 101 aa13□□□□□ -0.33
CIRBP-221ENST00000589161 C9orf62Q8N4C0 152 aa13□□□□□ -0.33
CIRBP-221ENST00000589161 TAGLN2P37802 199 aaKnown RBP12.99□□□□□ -0.33
CIRBP-221ENST00000589161 ERVFC1-1P60608 527 aa12.99□□□□□ -0.33
CIRBP-221ENST00000589161 CENPWQ5EE01 88 aa12.99□□□□□ -0.33
CIRBP-221ENST00000589161 SMIM12Q96EX1 92 aa12.99□□□□□ -0.33
CIRBP-221ENST00000589161 SSBP4Q9BWG4 385 aaPredicted RBP12.99□□□□□ -0.33
CIRBP-221ENST00000589161 A0A087WWC5 75 aa12.98□□□□□ -0.33
CIRBP-221ENST00000589161 SNAI2O43623 268 aa12.98□□□□□ -0.33
CIRBP-221ENST00000589161 OR5AL1P0C617 328 aa12.98□□□□□ -0.33
CIRBP-221ENST00000589161 BCL2P10415 239 aa12.98□□□□□ -0.33
CIRBP-221ENST00000589161 DAZAP1Q96EP5 407 aaKnown RBP12.98□□□□□ -0.33
CIRBP-221ENST00000589161 MED9Q9NWA0 146 aa12.98□□□□□ -0.33
CIRBP-221ENST00000589161 Q9UF83 564 aa12.98□□□□□ -0.33
CIRBP-221ENST00000589161 VAX2Q9UIW0 290 aa12.98□□□□□ -0.33
CIRBP-221ENST00000589161 TRBV10-1A0A0K0K1A3 114 aa12.97□□□□□ -0.33
CIRBP-221ENST00000589161 GNG4P50150 75 aa12.97□□□□□ -0.33
CIRBP-221ENST00000589161 KRTAP10-2P60368 255 aa12.97□□□□□ -0.33
CIRBP-221ENST00000589161 SPANXN1Q5VSR9 72 aa12.97□□□□□ -0.33
CIRBP-221ENST00000589161 OR10AG1Q8NH19 301 aa12.97□□□□□ -0.33
CIRBP-221ENST00000589161 PGPEP1Q9NXJ5 209 aa12.97□□□□□ -0.33
CIRBP-221ENST00000589161 RAB19A4D1S5 217 aa12.96□□□□□ -0.33
CIRBP-221ENST00000589161 IBA57-AS1B1ANH7 110 aa12.96□□□□□ -0.33
CIRBP-221ENST00000589161 CDK2AP2O75956 126 aa12.95□□□□□ -0.34
CIRBP-221ENST00000589161 IGLV2-8P01709 118 aa12.95□□□□□ -0.34
CIRBP-221ENST00000589161 IGHV3-30P01768 117 aa12.95□□□□□ -0.34
CIRBP-221ENST00000589161 IGHV3-33P01772 117 aa12.95□□□□□ -0.34
CIRBP-221ENST00000589161 IGHV3-30-3P0DP02 117 aa12.95□□□□□ -0.34
CIRBP-221ENST00000589161 IGHV3-30-5P0DP03 117 aa12.95□□□□□ -0.34
CIRBP-221ENST00000589161 RPS20P60866 119 aaKnown RBP12.95□□□□□ -0.34
CIRBP-221ENST00000589161 RAB4BP61018 213 aa12.95□□□□□ -0.34
CIRBP-221ENST00000589161 BIN3Q9NQY0 253 aa12.95□□□□□ -0.34
CIRBP-221ENST00000589161 BLOC1S1P78537 153 aa12.94□□□□□ -0.34
CIRBP-221ENST00000589161 RPL36AP83881 106 aaKnown RBP12.94□□□□□ -0.34
CIRBP-221ENST00000589161 RPL36ALQ969Q0 106 aaKnown RBP12.94□□□□□ -0.34
CIRBP-221ENST00000589161 A0A087WTM6 91 aa12.93□□□□□ -0.34
CIRBP-221ENST00000589161 OR2D3Q8NGH3 330 aa12.93□□□□□ -0.34
CIRBP-221ENST00000589161 TRBV7-3A0A075B6L6 115 aa12.92□□□□□ -0.34
CIRBP-221ENST00000589161 MUC21A0A0G2JKD1 596 aa12.92□□□□□ -0.34
CIRBP-221ENST00000589161 MUC21A0A140T8X8 626 aa12.92□□□□□ -0.34
CIRBP-221ENST00000589161 XKRY2A2RUG3 117 aa12.92□□□□□ -0.34
CIRBP-221ENST00000589161 C19orf71A6NCJ1 209 aa12.92□□□□□ -0.34
CIRBP-221ENST00000589161 PSCAO43653 123 aa12.92□□□□□ -0.34
CIRBP-221ENST00000589161 LAGE3Q14657 143 aa12.92□□□□□ -0.34
CIRBP-221ENST00000589161 ZNF56Q15929 161 aa12.92□□□□□ -0.34
CIRBP-221ENST00000589161 CDPF1Q6NVV7 123 aa12.92□□□□□ -0.34
CIRBP-221ENST00000589161 ALKAL2Q6UX46 152 aa12.92□□□□□ -0.34
CIRBP-221ENST00000589161 P01737 135 aa12.91□□□□□ -0.34
CIRBP-221ENST00000589161 SMIM17P0DL12 118 aa12.91□□□□□ -0.34
CIRBP-221ENST00000589161 SSTP61278 116 aa12.91□□□□□ -0.34
CIRBP-221ENST00000589161 OR10G8Q8NGN5 311 aa12.91□□□□□ -0.34
CIRBP-221ENST00000589161 TRBV20OR9-2A0A075B6H5 130 aa12.9□□□□□ -0.34
CIRBP-221ENST00000589161 UBE2D3P61077 147 aa12.9□□□□□ -0.34
CIRBP-221ENST00000589161 UBE2D2P62837 147 aa12.9□□□□□ -0.34
CIRBP-221ENST00000589161 FER1L6-AS1Q8NA97 138 aa12.9□□□□□ -0.34
CIRBP-221ENST00000589161 AP1S3Q96PC3 154 aa12.9□□□□□ -0.34
CIRBP-221ENST00000589161 TPPP3Q9BW30 176 aa12.9□□□□□ -0.34
CIRBP-221ENST00000589161 Q9HAA7 133 aa12.9□□□□□ -0.34
CIRBP-221ENST00000589161 F5H697 171 aa12.89□□□□□ -0.35
CIRBP-221ENST00000589161 IGLC6P0CF74 106 aa12.89□□□□□ -0.35
CIRBP-221ENST00000589161 GZMBP10144 247 aa12.89□□□□□ -0.35
CIRBP-221ENST00000589161 TOR2AQ5JU69 321 aa12.89□□□□□ -0.35
CIRBP-221ENST00000589161 URGCP-MRPS24S4R325 110 aa12.89□□□□□ -0.35
CIRBP-221ENST00000589161 LRP1BQ9NZR2 4599 aa12.89□□□□□ -0.35
CIRBP-221ENST00000589161 RYR1P21817 5038 aa12.88□□□□□ -0.35
CIRBP-221ENST00000589161 TRAV8-3A0A0A6YYJ7 113 aa12.88□□□□□ -0.35
CIRBP-221ENST00000589161 F2Z2F3 143 aa12.88□□□□□ -0.35
CIRBP-221ENST00000589161 CACNG7P62955 275 aa12.88□□□□□ -0.35
CIRBP-221ENST00000589161 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.88□□□□□ -0.35
CIRBP-221ENST00000589161 LYPD6BQ8NI32 183 aa12.88□□□□□ -0.35
CIRBP-221ENST00000589161 TM2D2Q9BX73 214 aa12.88□□□□□ -0.35
CIRBP-221ENST00000589161 RBFOX3A6NFN3 312 aa12.87□□□□□ -0.35
CIRBP-221ENST00000589161 NEXN-AS1Q8NBZ9 246 aa12.87□□□□□ -0.35
CIRBP-221ENST00000589161 KIF25-AS1Q9Y6Z4 181 aa12.87□□□□□ -0.35
CIRBP-221ENST00000589161 TMEM250H0YL14 139 aa12.86□□□□□ -0.35
CIRBP-221ENST00000589161 DAZ4Q86SG3 579 aaKnown RBP12.86□□□□□ -0.35
CIRBP-221ENST00000589161 NIT1Q86X76 327 aa12.86□□□□□ -0.35
CIRBP-221ENST00000589161 Q8N3U1 123 aa12.86□□□□□ -0.35
CIRBP-221ENST00000589161 NUDT10Q8NFP7 164 aa12.86□□□□□ -0.35
CIRBP-221ENST00000589161 NUDT11Q96G61 164 aa12.86□□□□□ -0.35
CIRBP-221ENST00000589161 DAZ3Q9NR90 486 aaKnown RBP12.86□□□□□ -0.35
CIRBP-221ENST00000589161 A0A1B0GVG6 124 aa12.85□□□□□ -0.35
CIRBP-221ENST00000589161 LRCOL1A6NCL2 159 aa12.85□□□□□ -0.35
CIRBP-221ENST00000589161 NKX2-5P52952 324 aaPredicted RBP12.85□□□□□ -0.35
CIRBP-221ENST00000589161 KCNIP4Q6PIL6 250 aa12.85□□□□□ -0.35
CIRBP-221ENST00000589161 OCC1Q8TAD7 63 aa12.85□□□□□ -0.35
CIRBP-221ENST00000589161 CHCHD7Q9BUK0 85 aa12.85□□□□□ -0.35
CIRBP-221ENST00000589161 A0A087WX48 190 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms