RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 MAP1LC3BQ9GZQ8 125 aa5.3□□□□□ -1.56
RETREG3-207ENST00000589007 RPS10P5Q9NQ39 176 aa5.3□□□□□ -1.56
RETREG3-207ENST00000589007 MANBALQ9NQG1 85 aa5.3□□□□□ -1.56
RETREG3-207ENST00000589007 TMEM242Q9NWH2 141 aa5.3□□□□□ -1.56
RETREG3-207ENST00000589007 VAX2Q9UIW0 290 aa5.3□□□□□ -1.56
RETREG3-207ENST00000589007 RNF24Q9Y225 148 aa5.3□□□□□ -1.56
RETREG3-207ENST00000589007 A0A0J9YXV3 536 aa5.29□□□□□ -1.56
RETREG3-207ENST00000589007 TMEM250H0YL14 139 aa5.29□□□□□ -1.56
RETREG3-207ENST00000589007 LINC00694P0DN24 101 aa5.29□□□□□ -1.56
RETREG3-207ENST00000589007 CRISP2P16562 243 aa5.29□□□□□ -1.56
RETREG3-207ENST00000589007 UBE2G2P60604 165 aa5.29□□□□□ -1.56
RETREG3-207ENST00000589007 RAB5BP61020 215 aa5.29□□□□□ -1.56
RETREG3-207ENST00000589007 TDRG1Q3Y452 100 aa5.29□□□□□ -1.56
RETREG3-207ENST00000589007 SGK494Q96LW2 274 aa5.29□□□□□ -1.56
RETREG3-207ENST00000589007 SLC50A1Q9BRV3 221 aa5.29□□□□□ -1.56
RETREG3-207ENST00000589007 BIN3Q9NQY0 253 aa5.29□□□□□ -1.56
RETREG3-207ENST00000589007 RPH3ALQ9UNE2 315 aa5.29□□□□□ -1.56
RETREG3-207ENST00000589007 C1orf196B1AJZ1 125 aa5.28□□□□□ -1.56
RETREG3-207ENST00000589007 GGTLC3B5MD39 225 aa5.28□□□□□ -1.56
RETREG3-207ENST00000589007 ORM1P02763 201 aa5.28□□□□□ -1.56
RETREG3-207ENST00000589007 SLC25A5P05141 298 aaKnown RBP5.28□□□□□ -1.56
RETREG3-207ENST00000589007 LEPP41159 167 aa5.28□□□□□ -1.56
RETREG3-207ENST00000589007 TAS2R45P59539 299 aa5.28□□□□□ -1.56
RETREG3-207ENST00000589007 CYB561D1Q8N8Q1 229 aa5.28□□□□□ -1.56
RETREG3-207ENST00000589007 Q8TAT8 98 aa5.28□□□□□ -1.56
RETREG3-207ENST00000589007 HIST1H2BAQ96A08 127 aa5.28□□□□□ -1.56
RETREG3-207ENST00000589007 CTDSP1Q9GZU7 261 aa5.28□□□□□ -1.56
RETREG3-207ENST00000589007 AGPAT4-IT1Q9H0P7 198 aa5.28□□□□□ -1.56
RETREG3-207ENST00000589007 PPP1R14DQ9NXH3 145 aa5.28□□□□□ -1.56
RETREG3-207ENST00000589007 GNG13Q9P2W3 67 aa5.28□□□□□ -1.56
RETREG3-207ENST00000589007 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
RETREG3-207ENST00000589007 TRAV8-1A0A0A6YYK1 113 aa5.27□□□□□ -1.57
RETREG3-207ENST00000589007 PGPA6NDG6 321 aa5.27□□□□□ -1.57
RETREG3-207ENST00000589007 ZNF253O75346 499 aa5.27□□□□□ -1.57
RETREG3-207ENST00000589007 CXorf1O96002 111 aa5.27□□□□□ -1.57
RETREG3-207ENST00000589007 GATA1P15976 413 aaPredicted RBP5.27□□□□□ -1.57
RETREG3-207ENST00000589007 RAB5AP20339 215 aa5.27□□□□□ -1.57
RETREG3-207ENST00000589007 MEF2BQ02080 365 aaPredicted RBP5.27□□□□□ -1.57
RETREG3-207ENST00000589007 PQLC2Q6ZP29 291 aa5.27□□□□□ -1.57
RETREG3-207ENST00000589007 DAZ4Q86SG3 579 aaKnown RBP5.27□□□□□ -1.57
RETREG3-207ENST00000589007 RASL10AQ92737 203 aa5.27□□□□□ -1.57
RETREG3-207ENST00000589007 LINC00479Q96M42 142 aa5.27□□□□□ -1.57
RETREG3-207ENST00000589007 TM2D2Q9BX73 214 aa5.27□□□□□ -1.57
RETREG3-207ENST00000589007 DAZ3Q9NR90 486 aaKnown RBP5.27□□□□□ -1.57
RETREG3-207ENST00000589007 TRGV4A0A0C4DH28 118 aa5.26□□□□□ -1.57
RETREG3-207ENST00000589007 C9JCJ5 164 aa5.26□□□□□ -1.57
RETREG3-207ENST00000589007 DIRC3C9JPN6 131 aa5.26□□□□□ -1.57
RETREG3-207ENST00000589007 PDE6DO43924 150 aa5.26□□□□□ -1.57
RETREG3-207ENST00000589007 SUMO1P63165 101 aaKnown RBP5.26□□□□□ -1.57
RETREG3-207ENST00000589007 PDE6HQ13956 83 aa5.26□□□□□ -1.57
RETREG3-207ENST00000589007 SMUG1Q53HV7 270 aa5.26□□□□□ -1.57
RETREG3-207ENST00000589007 LCE2DQ5TA82 110 aaPredicted RBP5.26□□□□□ -1.57
RETREG3-207ENST00000589007 GOLT1AQ6ZVE7 132 aa5.26□□□□□ -1.57
RETREG3-207ENST00000589007 AAMDCQ9H7C9 122 aa5.26□□□□□ -1.57
RETREG3-207ENST00000589007 SDF2L1Q9HCN8 221 aa5.26□□□□□ -1.57
RETREG3-207ENST00000589007 OTORQ9NRC9 128 aa5.26□□□□□ -1.57
RETREG3-207ENST00000589007 NAT8Q9UHE5 227 aa5.26□□□□□ -1.57
RETREG3-207ENST00000589007 ARL2-SNX15V9GYD0 113 aa5.26□□□□□ -1.57
RETREG3-207ENST00000589007 IGHV1OR15-1A0A075B7D0 117 aa5.25□□□□□ -1.57
RETREG3-207ENST00000589007 TRAV4A0A0B4J268 109 aa5.25□□□□□ -1.57
RETREG3-207ENST00000589007 TRAV34A0A0B4J273 112 aa5.25□□□□□ -1.57
RETREG3-207ENST00000589007 ZNF727A8MUV8 499 aa5.25□□□□□ -1.57
RETREG3-207ENST00000589007 F6UZH7 168 aa5.25□□□□□ -1.57
RETREG3-207ENST00000589007 PAGE4O60829 102 aa5.25□□□□□ -1.57
RETREG3-207ENST00000589007 TMEM241Q24JQ0 296 aa5.25□□□□□ -1.57
RETREG3-207ENST00000589007 Q8N976 141 aa5.25□□□□□ -1.57
RETREG3-207ENST00000589007 MRPL53Q96EL3 112 aaKnown RBP5.25□□□□□ -1.57
RETREG3-207ENST00000589007 BTF3L4Q96K17 158 aa5.25□□□□□ -1.57
RETREG3-207ENST00000589007 YPEL4Q96NS1 127 aa5.25□□□□□ -1.57
RETREG3-207ENST00000589007 TMEM167BQ9NRX6 74 aa5.25□□□□□ -1.57
RETREG3-207ENST00000589007 TCRAP04437 139 aa5.24□□□□□ -1.57
RETREG3-207ENST00000589007 S100A6P06703 90 aa5.24□□□□□ -1.57
RETREG3-207ENST00000589007 CEBPGP53567 150 aa5.24□□□□□ -1.57
RETREG3-207ENST00000589007 SDIM1Q6ZPB5 146 aa5.24□□□□□ -1.57
RETREG3-207ENST00000589007 ANAPC16Q96DE5 110 aa5.24□□□□□ -1.57
RETREG3-207ENST00000589007 SMIM7Q9BQ49 75 aa5.24□□□□□ -1.57
RETREG3-207ENST00000589007 TCEAL7Q9BRU2 100 aa5.24□□□□□ -1.57
RETREG3-207ENST00000589007 TRBV24-1A0A075B6N3 115 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 TRAV8-3A0A0A6YYJ7 113 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 IGHV3-16A0A0C4DH30 117 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 SCO2A0A1W2PP80 73 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 A0A1W2PRE2 83 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 S100A8P05109 93 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 AKR1C3P42330 323 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 ZNF80P51504 273 aaPredicted RBP5.23□□□□□ -1.57
RETREG3-207ENST00000589007 ELOBQ15370 118 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 OR10J3Q5JRS4 329 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 CST9LP1Q5W188 147 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 SLC25A29Q8N8R3 303 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 C9orf163Q8N9P6 203 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 ATP6V0E2Q8NHE4 81 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 CMTM2Q8TAZ6 248 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 ISOC2Q96AB3 205 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 LINC00477Q96M19 166 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 ZNF492Q9P255 531 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 Q9UF83 564 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 EPDR1Q9UM22 224 aa5.23□□□□□ -1.57
RETREG3-207ENST00000589007 TRAV8-6A0A0B4J262 113 aa5.22□□□□□ -1.57
RETREG3-207ENST00000589007 C5orf52A6NGY3 159 aa5.22□□□□□ -1.57
RETREG3-207ENST00000589007 PEX7O00628 323 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms