RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 H2AFB2P0C5Z0 115 aa13.81□□□□□ -0.2
CAPNS1-205ENST00000588780 CHTF8P0CG12 524 aa13.81□□□□□ -0.2
CAPNS1-205ENST00000588780 UBE2D3P61077 147 aa13.81□□□□□ -0.2
CAPNS1-205ENST00000588780 UBE2D2P62837 147 aa13.81□□□□□ -0.2
CAPNS1-205ENST00000588780 CLRN3Q8NCR9 226 aa13.81□□□□□ -0.2
CAPNS1-205ENST00000588780 RNF185Q96GF1 192 aa13.81□□□□□ -0.2
CAPNS1-205ENST00000588780 IL36BQ9NZH7 164 aa13.81□□□□□ -0.2
CAPNS1-205ENST00000588780 TRBV7-3A0A075B6L6 115 aa13.8□□□□□ -0.2
CAPNS1-205ENST00000588780 SIX6O95475 246 aa13.8□□□□□ -0.2
CAPNS1-205ENST00000588780 CIRBPQ14011 172 aaKnown RBP13.8□□□□□ -0.2
CAPNS1-205ENST00000588780 SAPCD1Q5SSQ6 148 aa13.8□□□□□ -0.2
CAPNS1-205ENST00000588780 SMIM3Q9BZL3 60 aa13.8□□□□□ -0.2
CAPNS1-205ENST00000588780 AP5S1Q9NUS5 200 aa13.8□□□□□ -0.2
CAPNS1-205ENST00000588780 KIF25-AS1Q9Y6Z4 181 aa13.8□□□□□ -0.2
CAPNS1-205ENST00000588780 TRBV10-1A0A0K0K1A3 114 aa13.79□□□□□ -0.2
CAPNS1-205ENST00000588780 B4DEV8 164 aa13.79□□□□□ -0.2
CAPNS1-205ENST00000588780 PLA2G10O15496 165 aa13.79□□□□□ -0.2
CAPNS1-205ENST00000588780 PTTG1O95997 202 aa13.79□□□□□ -0.2
CAPNS1-205ENST00000588780 PKIAP61925 76 aa13.79□□□□□ -0.2
CAPNS1-205ENST00000588780 GTSF1Q8WW33 167 aa13.79□□□□□ -0.2
CAPNS1-205ENST00000588780 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.78□□□□□ -0.2
CAPNS1-205ENST00000588780 FABP5P3A8MUU1 101 aa13.78□□□□□ -0.2
CAPNS1-205ENST00000588780 ARMS2P0C7Q2 107 aa13.78□□□□□ -0.2
CAPNS1-205ENST00000588780 WDR73Q6P4I2 378 aa13.78□□□□□ -0.2
CAPNS1-205ENST00000588780 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.78□□□□□ -0.2
CAPNS1-205ENST00000588780 PHLDA3Q9Y5J5 127 aa13.78□□□□□ -0.2
CAPNS1-205ENST00000588780 A0A0J9YXV3 536 aa13.77□□□□□ -0.21
CAPNS1-205ENST00000588780 M0R381 172 aa13.77□□□□□ -0.21
CAPNS1-205ENST00000588780 ARL14EPLP0DKL9 152 aa13.77□□□□□ -0.21
CAPNS1-205ENST00000588780 RAB2AP61019 212 aa13.77□□□□□ -0.21
CAPNS1-205ENST00000588780 GRIFINA4D1Z8 144 aa13.76□□□□□ -0.21
CAPNS1-205ENST00000588780 M0R036 132 aa13.76□□□□□ -0.21
CAPNS1-205ENST00000588780 SUMO1P63165 101 aaKnown RBP13.76□□□□□ -0.21
CAPNS1-205ENST00000588780 LINC00269Q8N2A0 174 aa13.76□□□□□ -0.21
CAPNS1-205ENST00000588780 SPACA4Q8TDM5 124 aa13.76□□□□□ -0.21
CAPNS1-205ENST00000588780 SFRP2Q96HF1 295 aa13.76□□□□□ -0.21
CAPNS1-205ENST00000588780 H0YIZ8 118 aa13.75□□□□□ -0.21
CAPNS1-205ENST00000588780 CNBPP62633 177 aaKnown RBP13.75□□□□□ -0.21
CAPNS1-205ENST00000588780 EPDR1Q9UM22 224 aa13.75□□□□□ -0.21
CAPNS1-205ENST00000588780 IGLV10-54A0A075B6I4 117 aa13.74□□□□□ -0.21
CAPNS1-205ENST00000588780 TPT1P13693 172 aaKnown RBP13.74□□□□□ -0.21
CAPNS1-205ENST00000588780 REG3GQ6UW15 175 aa13.74□□□□□ -0.21
CAPNS1-205ENST00000588780 HSPB11Q9Y547 144 aa13.74□□□□□ -0.21
CAPNS1-205ENST00000588780 TRAV34A0A0B4J273 112 aa13.72□□□□□ -0.21
CAPNS1-205ENST00000588780 PRR3P79522 188 aaKnown RBP13.72□□□□□ -0.21
CAPNS1-205ENST00000588780 GAGE6Q13070 117 aa13.72□□□□□ -0.21
CAPNS1-205ENST00000588780 PLAC8Q9NZF1 115 aa13.72□□□□□ -0.21
CAPNS1-205ENST00000588780 CDC34P49427 236 aaPredicted RBP13.71□□□□□ -0.21
CAPNS1-205ENST00000588780 RBX1P62877 108 aa13.71□□□□□ -0.21
CAPNS1-205ENST00000588780 ZNF56Q15929 161 aa13.71□□□□□ -0.21
CAPNS1-205ENST00000588780 KRTAP26-1Q6PEX3 210 aa13.71□□□□□ -0.21
CAPNS1-205ENST00000588780 PRR34Q9NV39 138 aa13.71□□□□□ -0.21
CAPNS1-205ENST00000588780 ARL2-SNX15V9GYD0 113 aa13.71□□□□□ -0.21
CAPNS1-205ENST00000588780 FAM240BA0A1B0GVZ2 78 aa13.7□□□□□ -0.22
CAPNS1-205ENST00000588780 GCHFRP30047 84 aa13.7□□□□□ -0.22
CAPNS1-205ENST00000588780 CYCSP99999 105 aaKnown RBP13.7□□□□□ -0.22
CAPNS1-205ENST00000588780 ZFP82Q8N141 532 aa13.7□□□□□ -0.22
CAPNS1-205ENST00000588780 OR10G8Q8NGN5 311 aa13.7□□□□□ -0.22
CAPNS1-205ENST00000588780 LYPD6BQ8NI32 183 aa13.7□□□□□ -0.22
CAPNS1-205ENST00000588780 RBM38Q9H0Z9 239 aaKnown RBP13.7□□□□□ -0.22
CAPNS1-205ENST00000588780 TMSB15BA0A087X1C1 80 aa13.69□□□□□ -0.22
CAPNS1-205ENST00000588780 KRBOX1C9JBD0 128 aa13.69□□□□□ -0.22
CAPNS1-205ENST00000588780 KRTAP10-8P60410 259 aa13.69□□□□□ -0.22
CAPNS1-205ENST00000588780 MAJINQ3KP22 176 aa13.69□□□□□ -0.22
CAPNS1-205ENST00000588780 NEXN-AS1Q8NBZ9 246 aa13.69□□□□□ -0.22
CAPNS1-205ENST00000588780 RPL12P30050 165 aaKnown RBP13.68□□□□□ -0.22
CAPNS1-205ENST00000588780 RAB5CP51148 216 aa13.68□□□□□ -0.22
CAPNS1-205ENST00000588780 IGKV2-24A0A0C4DH68 120 aa13.67□□□□□ -0.22
CAPNS1-205ENST00000588780 IFNA7P01567 189 aa13.67□□□□□ -0.22
CAPNS1-205ENST00000588780 STAG3L2P0CL84 134 aa13.67□□□□□ -0.22
CAPNS1-205ENST00000588780 STAG3L3P0CL85 134 aa13.67□□□□□ -0.22
CAPNS1-205ENST00000588780 REG3AQ06141 175 aa13.67□□□□□ -0.22
CAPNS1-205ENST00000588780 PPP1R1CQ8WVI7 109 aa13.67□□□□□ -0.22
CAPNS1-205ENST00000588780 RAB4BP61018 213 aa13.66□□□□□ -0.22
CAPNS1-205ENST00000588780 COX6A2Q02221 97 aa13.66□□□□□ -0.22
CAPNS1-205ENST00000588780 TMEM97Q5BJF2 176 aa13.66□□□□□ -0.22
CAPNS1-205ENST00000588780 DNLZQ5SXM8 178 aa13.66□□□□□ -0.22
CAPNS1-205ENST00000588780 SPINK6Q6UWN8 80 aa13.66□□□□□ -0.22
CAPNS1-205ENST00000588780 TMEM167BQ9NRX6 74 aa13.66□□□□□ -0.22
CAPNS1-205ENST00000588780 SH2D1AO60880 128 aa13.65□□□□□ -0.22
CAPNS1-205ENST00000588780 SLPIP03973 132 aa13.65□□□□□ -0.22
CAPNS1-205ENST00000588780 PET100P0DJ07 73 aa13.65□□□□□ -0.22
CAPNS1-205ENST00000588780 RAB24Q969Q5 203 aa13.65□□□□□ -0.22
CAPNS1-205ENST00000588780 DERL1Q9BUN8 251 aa13.65□□□□□ -0.22
CAPNS1-205ENST00000588780 KRTAP9-2Q9BYQ4 174 aa13.65□□□□□ -0.22
CAPNS1-205ENST00000588780 WFDC1Q9HC57 220 aa13.65□□□□□ -0.22
CAPNS1-205ENST00000588780 TRBV25-1A0A075B6N4 114 aa13.64□□□□□ -0.23
CAPNS1-205ENST00000588780 F5H697 171 aa13.64□□□□□ -0.23
CAPNS1-205ENST00000588780 STPG4Q8N801 248 aa13.64□□□□□ -0.23
CAPNS1-205ENST00000588780 FAM162BQ5T6X4 162 aa13.63□□□□□ -0.23
CAPNS1-205ENST00000588780 NTM-AS1Q6ZSK4 140 aa13.63□□□□□ -0.23
CAPNS1-205ENST00000588780 Q86TA4 180 aa13.63□□□□□ -0.23
CAPNS1-205ENST00000588780 TRAV8-4A0A0B4J246 113 aa13.62□□□□□ -0.23
CAPNS1-205ENST00000588780 CXorf1O96002 111 aa13.62□□□□□ -0.23
CAPNS1-205ENST00000588780 P01737 135 aa13.62□□□□□ -0.23
CAPNS1-205ENST00000588780 CRIP1P50238 77 aa13.62□□□□□ -0.23
CAPNS1-205ENST00000588780 MZT2BQ6NZ67 158 aa13.62□□□□□ -0.23
CAPNS1-205ENST00000588780 SUN5Q8TC36 379 aa13.62□□□□□ -0.23
CAPNS1-205ENST00000588780 MPC2O95563 127 aa13.61□□□□□ -0.23
CAPNS1-205ENST00000588780 TRBV6-1A0A0K0K1D8 114 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms