RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 SCXQ7RTU7 201 aa9.29□□□□□ -0.92
ERCC1-205ENST00000587888 OR11H4Q8NGC9 324 aa9.29□□□□□ -0.92
ERCC1-205ENST00000587888 ZC2HC1AQ96GY0 325 aa9.29□□□□□ -0.92
ERCC1-205ENST00000587888 MED28Q9H204 178 aa9.29□□□□□ -0.92
ERCC1-205ENST00000587888 TMSB15BA0A087X1C1 80 aa9.28□□□□□ -0.92
ERCC1-205ENST00000587888 M0R381 172 aa9.28□□□□□ -0.92
ERCC1-205ENST00000587888 RHODO00212 210 aa9.28□□□□□ -0.92
ERCC1-205ENST00000587888 Q86TA4 180 aa9.28□□□□□ -0.92
ERCC1-205ENST00000587888 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
ERCC1-205ENST00000587888 PHLDA3Q9Y5J5 127 aa9.28□□□□□ -0.92
ERCC1-205ENST00000587888 A0A087WX48 190 aa9.27□□□□□ -0.93
ERCC1-205ENST00000587888 BORCS7-ASMTA0A0B4J1R7 106 aa9.27□□□□□ -0.93
ERCC1-205ENST00000587888 SH2D1AO60880 128 aa9.27□□□□□ -0.93
ERCC1-205ENST00000587888 SEC11BP0C7V7 166 aa9.27□□□□□ -0.93
ERCC1-205ENST00000587888 DNLZQ5SXM8 178 aa9.27□□□□□ -0.93
ERCC1-205ENST00000587888 KCNIP4Q6PIL6 250 aa9.27□□□□□ -0.93
ERCC1-205ENST00000587888 INO80EQ8NBZ0 244 aaPredicted RBP9.27□□□□□ -0.93
ERCC1-205ENST00000587888 SFRP2Q96HF1 295 aa9.27□□□□□ -0.93
ERCC1-205ENST00000587888 MYCBP2O75592 4640 aa9.26□□□□□ -0.93
ERCC1-205ENST00000587888 CTXND1A0A1B0GTU2 59 aa9.26□□□□□ -0.93
ERCC1-205ENST00000587888 FAM74A7A6NL05 159 aa9.26□□□□□ -0.93
ERCC1-205ENST00000587888 TMEM262E9PQX1 116 aa9.26□□□□□ -0.93
ERCC1-205ENST00000587888 TPT1P13693 172 aaKnown RBP9.26□□□□□ -0.93
ERCC1-205ENST00000587888 ELOBQ15370 118 aa9.26□□□□□ -0.93
ERCC1-205ENST00000587888 FAM162BQ5T6X4 162 aa9.26□□□□□ -0.93
ERCC1-205ENST00000587888 CHAC1Q9BUX1 264 aa9.26□□□□□ -0.93
ERCC1-205ENST00000587888 CIRBP-AS1Q8TBR5 109 aa9.25□□□□□ -0.93
ERCC1-205ENST00000587888 HIST1H2BAQ96A08 127 aa9.25□□□□□ -0.93
ERCC1-205ENST00000587888 NKX6-2Q9C056 277 aaPredicted RBP9.25□□□□□ -0.93
ERCC1-205ENST00000587888 ZFP30Q9Y2G7 519 aa9.25□□□□□ -0.93
ERCC1-205ENST00000587888 FXYD6-FXYD2A0A087WZ82 144 aa9.24□□□□□ -0.93
ERCC1-205ENST00000587888 UBE2G1P62253 170 aa9.24□□□□□ -0.93
ERCC1-205ENST00000587888 RPL36AP83881 106 aaKnown RBP9.24□□□□□ -0.93
ERCC1-205ENST00000587888 AKR1C8PQ5T2L2 129 aa9.24□□□□□ -0.93
ERCC1-205ENST00000587888 RPL36ALQ969Q0 106 aaKnown RBP9.24□□□□□ -0.93
ERCC1-205ENST00000587888 TRBV7-3A0A075B6L6 115 aa9.23□□□□□ -0.93
ERCC1-205ENST00000587888 UBE2D3P61077 147 aa9.23□□□□□ -0.93
ERCC1-205ENST00000587888 UBE2D2P62837 147 aa9.23□□□□□ -0.93
ERCC1-205ENST00000587888 Q0VG73 95 aa9.23□□□□□ -0.93
ERCC1-205ENST00000587888 ZNF674Q2M3X9 581 aa9.23□□□□□ -0.93
ERCC1-205ENST00000587888 CST9LP1Q5W188 147 aa9.23□□□□□ -0.93
ERCC1-205ENST00000587888 ZFP82Q8N141 532 aa9.23□□□□□ -0.93
ERCC1-205ENST00000587888 FMC1Q96HJ9 113 aa9.23□□□□□ -0.93
ERCC1-205ENST00000587888 TRBV10-1A0A0K0K1A3 114 aa9.22□□□□□ -0.93
ERCC1-205ENST00000587888 KRTAP10-4P60372 401 aaPredicted RBP9.22□□□□□ -0.93
ERCC1-205ENST00000587888 LINC01559Q495D7 138 aa9.22□□□□□ -0.93
ERCC1-205ENST00000587888 ENHOQ6UWT2 76 aa9.22□□□□□ -0.93
ERCC1-205ENST00000587888 COX8CQ7Z4L0 72 aa9.22□□□□□ -0.93
ERCC1-205ENST00000587888 C15orf54Q8N8G6 183 aa9.22□□□□□ -0.93
ERCC1-205ENST00000587888 CHCHD7Q9BUK0 85 aa9.22□□□□□ -0.93
ERCC1-205ENST00000587888 IGLV2-8P01709 118 aa9.21□□□□□ -0.94
ERCC1-205ENST00000587888 GIPP09681 153 aaPredicted RBP9.21□□□□□ -0.94
ERCC1-205ENST00000587888 SERTAD4-AS1Q5TG53 156 aa9.21□□□□□ -0.94
ERCC1-205ENST00000587888 ATRAIDQ6UW56 229 aa9.21□□□□□ -0.94
ERCC1-205ENST00000587888 C1orf43Q9BWL3 253 aa9.21□□□□□ -0.94
ERCC1-205ENST00000587888 TRBV6-8A0A0A6YYG3 113 aa9.2□□□□□ -0.94
ERCC1-205ENST00000587888 MAP1LC3B2A6NCE7 125 aa9.2□□□□□ -0.94
ERCC1-205ENST00000587888 LTAP01374 205 aa9.2□□□□□ -0.94
ERCC1-205ENST00000587888 ANGP03950 147 aaKnown RBP9.2□□□□□ -0.94
ERCC1-205ENST00000587888 RAB4BP61018 213 aa9.2□□□□□ -0.94
ERCC1-205ENST00000587888 ZNF56Q15929 161 aa9.2□□□□□ -0.94
ERCC1-205ENST00000587888 C14orf177Q52M58 125 aa9.2□□□□□ -0.94
ERCC1-205ENST00000587888 MAP1LC3BQ9GZQ8 125 aa9.2□□□□□ -0.94
ERCC1-205ENST00000587888 MUC21A0A0G2JKD1 596 aa9.19□□□□□ -0.94
ERCC1-205ENST00000587888 MUC21A0A140T8X8 626 aa9.19□□□□□ -0.94
ERCC1-205ENST00000587888 PTTG1O95997 202 aa9.19□□□□□ -0.94
ERCC1-205ENST00000587888 CRPP02741 224 aa9.19□□□□□ -0.94
ERCC1-205ENST00000587888 AKR1C3P42330 323 aa9.19□□□□□ -0.94
ERCC1-205ENST00000587888 SSTP61278 116 aa9.19□□□□□ -0.94
ERCC1-205ENST00000587888 MPV17L2Q567V2 206 aa9.19□□□□□ -0.94
ERCC1-205ENST00000587888 NEXN-AS1Q8NBZ9 246 aa9.19□□□□□ -0.94
ERCC1-205ENST00000587888 STOML3Q8TAV4 291 aa9.19□□□□□ -0.94
ERCC1-205ENST00000587888 CHCHD5Q9BSY4 110 aa9.19□□□□□ -0.94
ERCC1-205ENST00000587888 TRBV6-1A0A0K0K1D8 114 aa9.18□□□□□ -0.94
ERCC1-205ENST00000587888 USP17L23D6RBM5 183 aa9.18□□□□□ -0.94
ERCC1-205ENST00000587888 F5H697 171 aa9.18□□□□□ -0.94
ERCC1-205ENST00000587888 PAGE4O60829 102 aa9.18□□□□□ -0.94
ERCC1-205ENST00000587888 OXTP01178 125 aa9.18□□□□□ -0.94
ERCC1-205ENST00000587888 HLA-DQA1P01909 254 aa9.18□□□□□ -0.94
ERCC1-205ENST00000587888 RPL19P84098 196 aaKnown RBP9.18□□□□□ -0.94
ERCC1-205ENST00000587888 OR10G8Q8NGN5 311 aa9.18□□□□□ -0.94
ERCC1-205ENST00000587888 FHITP49789 147 aa9.17□□□□□ -0.94
ERCC1-205ENST00000587888 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.17□□□□□ -0.94
ERCC1-205ENST00000587888 OR10AG1Q8NH19 301 aa9.17□□□□□ -0.94
ERCC1-205ENST00000587888 ZNF471Q9BX82 626 aaPredicted RBP9.17□□□□□ -0.94
ERCC1-205ENST00000587888 PRSS1P07477 247 aa9.16□□□□□ -0.94
ERCC1-205ENST00000587888 RPL37AP61513 92 aaKnown RBP9.16□□□□□ -0.94
ERCC1-205ENST00000587888 TCEAL7Q9BRU2 100 aa9.16□□□□□ -0.94
ERCC1-205ENST00000587888 CYTL1Q9NRR1 136 aa9.16□□□□□ -0.94
ERCC1-205ENST00000587888 A0A1B0GV50 99 aa9.15□□□□□ -0.94
ERCC1-205ENST00000587888 ARPC5O15511 151 aa9.15□□□□□ -0.94
ERCC1-205ENST00000587888 SPANXN1Q5VSR9 72 aa9.15□□□□□ -0.94
ERCC1-205ENST00000587888 PRR27Q6MZM9 219 aa9.15□□□□□ -0.94
ERCC1-205ENST00000587888 CLPSL2Q6UWE3 100 aa9.15□□□□□ -0.94
ERCC1-205ENST00000587888 S100A9P06702 114 aaKnown RBP9.14□□□□□ -0.95
ERCC1-205ENST00000587888 GAGE6Q13070 117 aa9.14□□□□□ -0.95
ERCC1-205ENST00000587888 MIAQ16674 131 aa9.14□□□□□ -0.95
ERCC1-205ENST00000587888 NTM-AS1Q6ZSK4 140 aa9.14□□□□□ -0.95
ERCC1-205ENST00000587888 BAGE2Q86Y30 109 aa9.14□□□□□ -0.95
ERCC1-205ENST00000587888 SFT2D1Q8WV19 159 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms