RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 FAM74A3Q4VXF1 159 aa9.54□□□□□ -0.88
PRKCSH-202ENST00000585540 SPANXN1Q5VSR9 72 aa9.54□□□□□ -0.88
PRKCSH-202ENST00000585540 SLC25A29Q8N8R3 303 aa9.54□□□□□ -0.88
PRKCSH-202ENST00000585540 M0R381 172 aa9.53□□□□□ -0.88
PRKCSH-202ENST00000585540 IGLC6P0CF74 106 aa9.53□□□□□ -0.88
PRKCSH-202ENST00000585540 UFSP1Q6NVU6 142 aa9.53□□□□□ -0.88
PRKCSH-202ENST00000585540 WDR73Q6P4I2 378 aa9.53□□□□□ -0.88
PRKCSH-202ENST00000585540 FAM231DQ6ZW35 169 aa9.53□□□□□ -0.88
PRKCSH-202ENST00000585540 FER1L6-AS1Q8NA97 138 aa9.53□□□□□ -0.88
PRKCSH-202ENST00000585540 AP1S3Q96PC3 154 aa9.53□□□□□ -0.88
PRKCSH-202ENST00000585540 VPS13DQ5THJ4 4388 aa9.53□□□□□ -0.88
PRKCSH-202ENST00000585540 MUC21A0A0G2JKD1 596 aa9.52□□□□□ -0.89
PRKCSH-202ENST00000585540 MUC21A0A140T8X8 626 aa9.52□□□□□ -0.89
PRKCSH-202ENST00000585540 SIVA1O15304 175 aa9.52□□□□□ -0.89
PRKCSH-202ENST00000585540 RPL23P62829 140 aaKnown RBP9.52□□□□□ -0.89
PRKCSH-202ENST00000585540 KMT2AQ03164 3969 aa9.52□□□□□ -0.89
PRKCSH-202ENST00000585540 CT83Q5H943 113 aa9.52□□□□□ -0.89
PRKCSH-202ENST00000585540 LYPD5Q6UWN5 251 aa9.52□□□□□ -0.89
PRKCSH-202ENST00000585540 OR10AG1Q8NH19 301 aa9.52□□□□□ -0.89
PRKCSH-202ENST00000585540 RPP21Q9H633 154 aaKnown RBP9.52□□□□□ -0.89
PRKCSH-202ENST00000585540 JPT2Q9H910 190 aa9.52□□□□□ -0.89
PRKCSH-202ENST00000585540 NAT8Q9UHE5 227 aa9.52□□□□□ -0.89
PRKCSH-202ENST00000585540 DNAH6Q9C0G6 4158 aa9.51□□□□□ -0.89
PRKCSH-202ENST00000585540 IGLV2-18A0A075B6J9 118 aa9.51□□□□□ -0.89
PRKCSH-202ENST00000585540 TRAV9-2A0A087WT02 112 aa9.51□□□□□ -0.89
PRKCSH-202ENST00000585540 TRGC1P0CF51 173 aa9.51□□□□□ -0.89
PRKCSH-202ENST00000585540 TMEM241Q24JQ0 296 aa9.51□□□□□ -0.89
PRKCSH-202ENST00000585540 C1orf134Q5TEV5 83 aa9.51□□□□□ -0.89
PRKCSH-202ENST00000585540 IGHV3-73A0A0B4J1V6 119 aa9.5□□□□□ -0.89
PRKCSH-202ENST00000585540 GATCO43716 136 aaKnown RBP9.5□□□□□ -0.89
PRKCSH-202ENST00000585540 CRYGDP07320 174 aa9.5□□□□□ -0.89
PRKCSH-202ENST00000585540 SMIM17P0DL12 118 aa9.5□□□□□ -0.89
PRKCSH-202ENST00000585540 ERVFC1-1P60608 527 aa9.5□□□□□ -0.89
PRKCSH-202ENST00000585540 RAB4BP61018 213 aa9.5□□□□□ -0.89
PRKCSH-202ENST00000585540 ADIRFQ15847 76 aa9.5□□□□□ -0.89
PRKCSH-202ENST00000585540 FAM74A4Q5TZK3 123 aa9.5□□□□□ -0.89
PRKCSH-202ENST00000585540 COMMD7Q86VX2 200 aa9.5□□□□□ -0.89
PRKCSH-202ENST00000585540 C10orf126Q8N4M7 172 aa9.5□□□□□ -0.89
PRKCSH-202ENST00000585540 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.5□□□□□ -0.89
PRKCSH-202ENST00000585540 ISOC2Q96AB3 205 aa9.5□□□□□ -0.89
PRKCSH-202ENST00000585540 TPPP3Q9BW30 176 aa9.5□□□□□ -0.89
PRKCSH-202ENST00000585540 SAMD10Q9BYL1 202 aa9.5□□□□□ -0.89
PRKCSH-202ENST00000585540 HYDINQ4G0P3 5121 aa9.49□□□□□ -0.89
PRKCSH-202ENST00000585540 A0A087WWC5 75 aa9.49□□□□□ -0.89
PRKCSH-202ENST00000585540 TRAV8-6A0A0B4J262 113 aa9.49□□□□□ -0.89
PRKCSH-202ENST00000585540 LINC00694P0DN24 101 aa9.49□□□□□ -0.89
PRKCSH-202ENST00000585540 CTRLP40313 264 aa9.49□□□□□ -0.89
PRKCSH-202ENST00000585540 RPL36AP83881 106 aaKnown RBP9.49□□□□□ -0.89
PRKCSH-202ENST00000585540 C6orf223Q8N319 242 aa9.49□□□□□ -0.89
PRKCSH-202ENST00000585540 ATP6V0E2Q8NHE4 81 aa9.49□□□□□ -0.89
PRKCSH-202ENST00000585540 RPL36ALQ969Q0 106 aaKnown RBP9.49□□□□□ -0.89
PRKCSH-202ENST00000585540 CNFNQ9BYD5 112 aa9.49□□□□□ -0.89
PRKCSH-202ENST00000585540 GTSF1LQ9H1H1 148 aa9.49□□□□□ -0.89
PRKCSH-202ENST00000585540 FAM231BA6NCW3 169 aa9.48□□□□□ -0.89
PRKCSH-202ENST00000585540 A8MWL6 223 aa9.48□□□□□ -0.89
PRKCSH-202ENST00000585540 H7C1H1 209 aa9.48□□□□□ -0.89
PRKCSH-202ENST00000585540 M0R2N4 97 aa9.48□□□□□ -0.89
PRKCSH-202ENST00000585540 SSTP61278 116 aa9.48□□□□□ -0.89
PRKCSH-202ENST00000585540 LELP1Q5T871 98 aa9.48□□□□□ -0.89
PRKCSH-202ENST00000585540 OSTCQ9NRP0 149 aa9.48□□□□□ -0.89
PRKCSH-202ENST00000585540 BIRC6Q9NR09 4857 aa9.48□□□□□ -0.89
PRKCSH-202ENST00000585540 A0A087WWL8 130 aa9.47□□□□□ -0.89
PRKCSH-202ENST00000585540 DNAH10OSP0CZ25 163 aa9.47□□□□□ -0.89
PRKCSH-202ENST00000585540 EVI2AP22794 236 aa9.47□□□□□ -0.89
PRKCSH-202ENST00000585540 ZNF56Q15929 161 aa9.47□□□□□ -0.89
PRKCSH-202ENST00000585540 UQCC3Q6UW78 93 aa9.47□□□□□ -0.89
PRKCSH-202ENST00000585540 LYZL1Q6UWQ5 148 aa9.47□□□□□ -0.89
PRKCSH-202ENST00000585540 OR10G8Q8NGN5 311 aa9.47□□□□□ -0.89
PRKCSH-202ENST00000585540 GTSF1Q8WW33 167 aa9.47□□□□□ -0.89
PRKCSH-202ENST00000585540 GFRA4Q9GZZ7 299 aa9.47□□□□□ -0.89
PRKCSH-202ENST00000585540 EPPK1P58107 5090 aaKnown RBP9.47□□□□□ -0.89
PRKCSH-202ENST00000585540 LOC100131303A0A0U1RQF7 123 aa9.46□□□□□ -0.9
PRKCSH-202ENST00000585540 LINC00862A6NCI5 91 aa9.46□□□□□ -0.9
PRKCSH-202ENST00000585540 ADCYAP1P18509 176 aa9.46□□□□□ -0.9
PRKCSH-202ENST00000585540 TMEM97Q5BJF2 176 aa9.46□□□□□ -0.9
PRKCSH-202ENST00000585540 NFE4Q86UQ8 179 aa9.46□□□□□ -0.9
PRKCSH-202ENST00000585540 C15orf54Q8N8G6 183 aa9.46□□□□□ -0.9
PRKCSH-202ENST00000585540 V9GYV3 84 aa9.46□□□□□ -0.9
PRKCSH-202ENST00000585540 TRBV7-3A0A075B6L6 115 aa9.45□□□□□ -0.9
PRKCSH-202ENST00000585540 FOXA3P55318 350 aaPredicted RBP9.45□□□□□ -0.9
PRKCSH-202ENST00000585540 LINC01556Q5JQF7 62 aa9.45□□□□□ -0.9
PRKCSH-202ENST00000585540 Q6ZSN1 163 aa9.45□□□□□ -0.9
PRKCSH-202ENST00000585540 SMIM15Q7Z3B0 74 aa9.45□□□□□ -0.9
PRKCSH-202ENST00000585540 BORCS7Q96B45 105 aa9.45□□□□□ -0.9
PRKCSH-202ENST00000585540 DNAJC30Q96LL9 226 aa9.45□□□□□ -0.9
PRKCSH-202ENST00000585540 DPH3P1Q9H4G8 78 aa9.45□□□□□ -0.9
PRKCSH-202ENST00000585540 MSRB1Q9NZV6 116 aa9.45□□□□□ -0.9
PRKCSH-202ENST00000585540 IGHV3-38A0A0C4DH36 116 aa9.44□□□□□ -0.9
PRKCSH-202ENST00000585540 GAGE12JA6NER3 117 aa9.44□□□□□ -0.9
PRKCSH-202ENST00000585540 PRSS29PA6NIE9 313 aa9.44□□□□□ -0.9
PRKCSH-202ENST00000585540 RTL8CO15255 209 aa9.44□□□□□ -0.9
PRKCSH-202ENST00000585540 PKIAP61925 76 aa9.44□□□□□ -0.9
PRKCSH-202ENST00000585540 GAGE1Q13065 139 aa9.44□□□□□ -0.9
PRKCSH-202ENST00000585540 GAGE4Q13068 117 aa9.44□□□□□ -0.9
PRKCSH-202ENST00000585540 GAGE5Q13069 117 aa9.44□□□□□ -0.9
PRKCSH-202ENST00000585540 GAGE13Q4V321 117 aa9.44□□□□□ -0.9
PRKCSH-202ENST00000585540 OR10J3Q5JRS4 329 aa9.44□□□□□ -0.9
PRKCSH-202ENST00000585540 C14orf178Q8N769 122 aaPredicted RBP9.44□□□□□ -0.9
PRKCSH-202ENST00000585540 TSKUQ8WUA8 353 aa9.44□□□□□ -0.9
PRKCSH-202ENST00000585540 FRZBQ92765 325 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms