RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ATP6V0CP27449 155 aa9.42□□□□□ -0.9
SDF2-202ENST00000585428 ASIPP42127 132 aa9.42□□□□□ -0.9
SDF2-202ENST00000585428 HSD17B11Q8NBQ5 300 aa9.42□□□□□ -0.9
SDF2-202ENST00000585428 SYT8Q8NBV8 401 aa9.42□□□□□ -0.9
SDF2-202ENST00000585428 URGCP-MRPS24S4R325 110 aa9.42□□□□□ -0.9
SDF2-202ENST00000585428 KRBOX1C9JBD0 128 aa9.41□□□□□ -0.9
SDF2-202ENST00000585428 CHCHD7Q9BUK0 85 aa9.41□□□□□ -0.9
SDF2-202ENST00000585428 TNFSF18Q9UNG2 199 aa9.41□□□□□ -0.9
SDF2-202ENST00000585428 ARL2-SNX15V9GYD0 113 aa9.41□□□□□ -0.9
SDF2-202ENST00000585428 B4DEV8 164 aa9.4□□□□□ -0.9
SDF2-202ENST00000585428 RHODO00212 210 aa9.4□□□□□ -0.9
SDF2-202ENST00000585428 IGLV2-8P01709 118 aa9.4□□□□□ -0.9
SDF2-202ENST00000585428 ARMS2P0C7Q2 107 aa9.4□□□□□ -0.9
SDF2-202ENST00000585428 LORP23490 312 aaPredicted RBP9.4□□□□□ -0.9
SDF2-202ENST00000585428 ELOBQ15370 118 aa9.4□□□□□ -0.9
SDF2-202ENST00000585428 COX8CQ7Z4L0 72 aa9.4□□□□□ -0.9
SDF2-202ENST00000585428 SFRP2Q96HF1 295 aa9.4□□□□□ -0.9
SDF2-202ENST00000585428 ACTR3CQ9C0K3 210 aaPredicted RBP9.4□□□□□ -0.9
SDF2-202ENST00000585428 UBR4Q5T4S7 5183 aa9.4□□□□□ -0.9
SDF2-202ENST00000585428 ENHOQ6UWT2 76 aa9.39□□□□□ -0.91
SDF2-202ENST00000585428 UBE2WQ96B02 151 aa9.39□□□□□ -0.91
SDF2-202ENST00000585428 AQP10Q96PS8 301 aa9.39□□□□□ -0.91
SDF2-202ENST00000585428 A0A087WX48 190 aa9.38□□□□□ -0.91
SDF2-202ENST00000585428 H3BVH4 76 aa9.38□□□□□ -0.91
SDF2-202ENST00000585428 Q0VG73 95 aa9.38□□□□□ -0.91
SDF2-202ENST00000585428 A0A087WWL8 130 aa9.37□□□□□ -0.91
SDF2-202ENST00000585428 TRBV10-1A0A0K0K1A3 114 aa9.37□□□□□ -0.91
SDF2-202ENST00000585428 GRIFINA4D1Z8 144 aa9.37□□□□□ -0.91
SDF2-202ENST00000585428 UBE2D3P61077 147 aa9.37□□□□□ -0.91
SDF2-202ENST00000585428 UBE2D2P62837 147 aa9.37□□□□□ -0.91
SDF2-202ENST00000585428 ZNF726P1Q15940 193 aa9.37□□□□□ -0.91
SDF2-202ENST00000585428 FAM74A4Q5TZK3 123 aa9.37□□□□□ -0.91
SDF2-202ENST00000585428 OR11H4Q8NGC9 324 aa9.37□□□□□ -0.91
SDF2-202ENST00000585428 ZC2HC1AQ96GY0 325 aa9.37□□□□□ -0.91
SDF2-202ENST00000585428 ZFP30Q9Y2G7 519 aa9.37□□□□□ -0.91
SDF2-202ENST00000585428 TRBV7-3A0A075B6L6 115 aa9.36□□□□□ -0.91
SDF2-202ENST00000585428 PEX7O00628 323 aa9.36□□□□□ -0.91
SDF2-202ENST00000585428 IFNA7P01567 189 aa9.36□□□□□ -0.91
SDF2-202ENST00000585428 C14orf177Q52M58 125 aa9.36□□□□□ -0.91
SDF2-202ENST00000585428 HIST1H2BAQ96A08 127 aa9.36□□□□□ -0.91
SDF2-202ENST00000585428 NKX6-2Q9C056 277 aaPredicted RBP9.36□□□□□ -0.91
SDF2-202ENST00000585428 FAT3Q8TDW7 4589 aa9.36□□□□□ -0.91
SDF2-202ENST00000585428 M0R036 132 aa9.35□□□□□ -0.91
SDF2-202ENST00000585428 SH2D1AO60880 128 aa9.35□□□□□ -0.91
SDF2-202ENST00000585428 DEFA1P59665 94 aa9.35□□□□□ -0.91
SDF2-202ENST00000585428 DEFA3P59666 94 aa9.35□□□□□ -0.91
SDF2-202ENST00000585428 RPL36AP83881 106 aaKnown RBP9.35□□□□□ -0.91
SDF2-202ENST00000585428 ZNF674Q2M3X9 581 aa9.35□□□□□ -0.91
SDF2-202ENST00000585428 Q5BKY6 102 aa9.35□□□□□ -0.91
SDF2-202ENST00000585428 Q86TA4 180 aa9.35□□□□□ -0.91
SDF2-202ENST00000585428 OR10G8Q8NGN5 311 aa9.35□□□□□ -0.91
SDF2-202ENST00000585428 RPL36ALQ969Q0 106 aaKnown RBP9.35□□□□□ -0.91
SDF2-202ENST00000585428 DAZAP1Q96EP5 407 aaKnown RBP9.35□□□□□ -0.91
SDF2-202ENST00000585428 PLA2G2DQ9UNK4 145 aa9.35□□□□□ -0.91
SDF2-202ENST00000585428 PHLDA3Q9Y5J5 127 aa9.35□□□□□ -0.91
SDF2-202ENST00000585428 TRBV6-8A0A0A6YYG3 113 aa9.34□□□□□ -0.91
SDF2-202ENST00000585428 FAM74A7A6NL05 159 aa9.34□□□□□ -0.91
SDF2-202ENST00000585428 TMEM262E9PQX1 116 aa9.34□□□□□ -0.91
SDF2-202ENST00000585428 HNRNPA3P51991 378 aaKnown RBP9.34□□□□□ -0.91
SDF2-202ENST00000585428 UBE2G2P60604 165 aa9.34□□□□□ -0.91
SDF2-202ENST00000585428 FAM162BQ5T6X4 162 aa9.34□□□□□ -0.91
SDF2-202ENST00000585428 DGAT2L7PQ6IED9 249 aa9.34□□□□□ -0.91
SDF2-202ENST00000585428 KCNIP4Q6PIL6 250 aa9.34□□□□□ -0.91
SDF2-202ENST00000585428 C1orf43Q9BWL3 253 aa9.34□□□□□ -0.91
SDF2-202ENST00000585428 M0R381 172 aa9.33□□□□□ -0.92
SDF2-202ENST00000585428 TPT1P13693 172 aaKnown RBP9.33□□□□□ -0.92
SDF2-202ENST00000585428 RPL37AP61513 92 aaKnown RBP9.33□□□□□ -0.92
SDF2-202ENST00000585428 MRPL18Q9H0U6 180 aaKnown RBP9.33□□□□□ -0.92
SDF2-202ENST00000585428 ALG5Q9Y673 324 aa9.33□□□□□ -0.92
SDF2-202ENST00000585428 TRBV6-1A0A0K0K1D8 114 aa9.32□□□□□ -0.92
SDF2-202ENST00000585428 CTXND1A0A1B0GTU2 59 aa9.32□□□□□ -0.92
SDF2-202ENST00000585428 PRSS1P07477 247 aa9.32□□□□□ -0.92
SDF2-202ENST00000585428 RAB4BP61018 213 aa9.32□□□□□ -0.92
SDF2-202ENST00000585428 RPL7L1Q6DKI1 246 aaKnown RBP9.32□□□□□ -0.92
SDF2-202ENST00000585428 PRR27Q6MZM9 219 aa9.32□□□□□ -0.92
SDF2-202ENST00000585428 ZFP82Q8N141 532 aa9.32□□□□□ -0.92
SDF2-202ENST00000585428 C9orf163Q8N9P6 203 aa9.32□□□□□ -0.92
SDF2-202ENST00000585428 FMC1Q96HJ9 113 aa9.32□□□□□ -0.92
SDF2-202ENST00000585428 USP17L23D6RBM5 183 aa9.31□□□□□ -0.92
SDF2-202ENST00000585428 LTAP01374 205 aa9.31□□□□□ -0.92
SDF2-202ENST00000585428 MPV17L2Q567V2 206 aa9.31□□□□□ -0.92
SDF2-202ENST00000585428 SDIM1Q6ZPB5 146 aa9.31□□□□□ -0.92
SDF2-202ENST00000585428 C15orf54Q8N8G6 183 aa9.31□□□□□ -0.92
SDF2-202ENST00000585428 NEXN-AS1Q8NBZ9 246 aa9.31□□□□□ -0.92
SDF2-202ENST00000585428 TMSB15BA0A087X1C1 80 aa9.3□□□□□ -0.92
SDF2-202ENST00000585428 ANGP03950 147 aaKnown RBP9.3□□□□□ -0.92
SDF2-202ENST00000585428 KRTAP26-1Q6PEX3 210 aa9.3□□□□□ -0.92
SDF2-202ENST00000585428 PRR34Q9NV39 138 aa9.3□□□□□ -0.92
SDF2-202ENST00000585428 BORCS7-ASMTA0A0B4J1R7 106 aa9.29□□□□□ -0.92
SDF2-202ENST00000585428 MT1HL1P0DM35 61 aa9.29□□□□□ -0.92
SDF2-202ENST00000585428 FHITP49789 147 aa9.29□□□□□ -0.92
SDF2-202ENST00000585428 MIAQ16674 131 aa9.29□□□□□ -0.92
SDF2-202ENST00000585428 NTM-AS1Q6ZSK4 140 aa9.29□□□□□ -0.92
SDF2-202ENST00000585428 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.29□□□□□ -0.92
SDF2-202ENST00000585428 PANO1I0J062 215 aa9.28□□□□□ -0.92
SDF2-202ENST00000585428 CRPP02741 224 aa9.28□□□□□ -0.92
SDF2-202ENST00000585428 UBE2G1P62253 170 aa9.28□□□□□ -0.92
SDF2-202ENST00000585428 INO80EQ8NBZ0 244 aaPredicted RBP9.28□□□□□ -0.92
SDF2-202ENST00000585428 SSBP4Q9BWG4 385 aaPredicted RBP9.28□□□□□ -0.92
SDF2-202ENST00000585428 MED28Q9H204 178 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms