RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-219	ENST00000584476	MRPL51	Q4U2R6	128 aa	Known RBP	4.22	□□□□□ -1.73
MSI2-219	ENST00000584476	FAM104B	Q5XKR9	115 aa		4.22	□□□□□ -1.73
MSI2-219	ENST00000584476	C11orf72	Q8NBR9	251 aa		4.22	□□□□□ -1.73
MSI2-219	ENST00000584476	RNF185	Q96GF1	192 aa		4.22	□□□□□ -1.73
MSI2-219	ENST00000584476	TMEM208	Q9BTX3	173 aa		4.22	□□□□□ -1.73
MSI2-219	ENST00000584476	C1QTNF4	Q9BXJ3	329 aa		4.22	□□□□□ -1.73
MSI2-219	ENST00000584476	TMEM191A	Q9H0A3	160 aa		4.22	□□□□□ -1.73
MSI2-219	ENST00000584476	CSTL1	Q9H114	145 aa		4.22	□□□□□ -1.73
MSI2-219	ENST00000584476	JPT2	Q9H910	190 aa		4.22	□□□□□ -1.73
MSI2-219	ENST00000584476	GOLT1B	Q9Y3E0	138 aa		4.22	□□□□□ -1.73
MSI2-219	ENST00000584476	TENM1	Q9UKZ4	2725 aa		4.22	□□□□□ -1.73
MSI2-219	ENST00000584476	ATR	Q13535	2644 aa		4.21	□□□□□ -1.74
MSI2-219	ENST00000584476	SMKR1	H3BMG3	65 aa		4.21	□□□□□ -1.74
MSI2-219	ENST00000584476	IGHV4-30-4	P0DP06	118 aa		4.21	□□□□□ -1.74
MSI2-219	ENST00000584476	RAB4A	P20338	218 aa		4.21	□□□□□ -1.74
MSI2-219	ENST00000584476	SNRPE	P62304	92 aa	Known RBP	4.21	□□□□□ -1.74
MSI2-219	ENST00000584476	ZNF415	Q09FC8	603 aa		4.21	□□□□□ -1.74
MSI2-219	ENST00000584476	IQCJ	Q1A5X6	159 aa		4.21	□□□□□ -1.74
MSI2-219	ENST00000584476	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.21	□□□□□ -1.74
MSI2-219	ENST00000584476	TMEM256	Q8N2U0	113 aa		4.21	□□□□□ -1.74
MSI2-219	ENST00000584476	C14orf178	Q8N769	122 aa	Predicted RBP	4.21	□□□□□ -1.74
MSI2-219	ENST00000584476	WWC2-AS2	Q96NR7	200 aa		4.21	□□□□□ -1.74
MSI2-219	ENST00000584476	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.21	□□□□□ -1.74
MSI2-219	ENST00000584476		U3KQK5	164 aa		4.21	□□□□□ -1.74
MSI2-219	ENST00000584476	NIPBL	Q6KC79	2804 aa	eCLIP	4.21	□□□□□ -1.74
MSI2-219	ENST00000584476	KIR2DL5B	A0A0G2JN68	375 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	KIR2DL5B	A0A0G2JPC4	375 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	LOC105371267	A0A1B0GV96	52 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	PLAC8L1	A1L4L8	177 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	C5orf52	A6NGY3	159 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476		D6R8Y8	96 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	NUPR1	O60356	82 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	NCR2	O95944	276 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	PRB2	P02812	416 aa	Predicted RBP	4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	GATA1	P15976	413 aa	Predicted RBP	4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	APOC4	P55056	127 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	LINC00315	P59091	139 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	ZNF876P	Q49A33	203 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	SMIM15	Q7Z3B0	74 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	KIR2DL5A	Q8N109	375 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	KIR2DL5B	Q8NHK3	375 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	IL17D	Q8TAD2	202 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	C18orf32	Q8TCD1	76 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	RNASE8	Q8TDE3	154 aa	Known RBP	4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	RCHY1	Q96PM5	261 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	SAMD10	Q9BYL1	202 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	MRPL16	Q9NX20	251 aa	Known RBP	4.2	□□□□□ -1.74
MSI2-219	ENST00000584476	KIF25-AS1	Q9Y6Z4	181 aa		4.2	□□□□□ -1.74
MSI2-219	ENST00000584476		A0A087WWL8	130 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	TRAV26-2	A0A0B4J265	109 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476		M0R2P5	195 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	S100A6	P06703	90 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	CRYGD	P07320	174 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	MGP	P08493	103 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	RIPPLY3	P57055	190 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476		Q0VG73	95 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	DEFB135	Q30KP9	77 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	PDZD11	Q5EBL8	140 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	COA6	Q5JTJ3	125 aa	Known RBP	4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	TMEM263	Q8WUH6	116 aa	Known RBP	4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	C16orf74	Q96GX8	76 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	PRELID3A	Q96N28	172 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	AP1S3	Q96PC3	154 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	SPX	Q9BT56	116 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	DPH3P1	Q9H4G8	78 aa		4.19	□□□□□ -1.74
MSI2-219	ENST00000584476	IGHV3-73	A0A0B4J1V6	119 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	IFITM10	A6NMD0	228 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476		A8MZ25	164 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	SERF1A	O75920	110 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	NPY	P01303	97 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	SMIM17	P0DL12	118 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	CKS2	P33552	79 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	EMP1	P54849	157 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	RRN3P1	Q2M238	152 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	OR10J3	Q5JRS4	329 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	FAM74A4	Q5TZK3	123 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476		Q6ZTI0	123 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	BAGE3	Q86Y29	109 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	ORMDL3	Q8N138	153 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	HIST3H2BB	Q8N257	126 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	POM121L12	Q8N7R1	296 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	NRAC	Q8N912	160 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	PTH2	Q96A98	100 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	URB1-AS1	Q96HZ7	61 aa		4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	NOP10	Q9NPE3	64 aa	Known RBP	4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	ZMAT5	Q9UDW3	170 aa	Known RBP	4.18	□□□□□ -1.74
MSI2-219	ENST00000584476	MUC4	Q99102	2169 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	TRGV1	A0A0A0MS02	117 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	LOC389332	A0A1B0GUA5	103 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476		F5H697	171 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476		K7EIL1	84 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	UBE2C	O00762	179 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	RS1	O15537	224 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	TNFRSF6B	O95407	300 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	PPBP	P02775	128 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	DAZ2	Q13117	558 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	KPRP	Q5T749	579 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	CFAP126	Q5VTH2	177 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	SUMO4	Q6EEV6	95 aa		4.17	□□□□□ -1.74
MSI2-219	ENST00000584476	UFSP1	Q6NVU6	142 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms