RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 OSTCQ9NRP0 149 aa17.01■□□□□ 0.31
MIR3960-201ENST00000583311 SRIP30626 198 aa17■□□□□ 0.31
MIR3960-201ENST00000583311 SAMD10Q9BYL1 202 aa17■□□□□ 0.31
MIR3960-201ENST00000583311 MUC21A0A0G2JKD1 596 aa16.99■□□□□ 0.31
MIR3960-201ENST00000583311 MUC21A0A140T8X8 626 aa16.99■□□□□ 0.31
MIR3960-201ENST00000583311 K7EQD1 137 aa16.99■□□□□ 0.31
MIR3960-201ENST00000583311 UFSP1Q6NVU6 142 aa16.99■□□□□ 0.31
MIR3960-201ENST00000583311 WDR73Q6P4I2 378 aa16.99■□□□□ 0.31
MIR3960-201ENST00000583311 LYZL1Q6UWQ5 148 aa16.99■□□□□ 0.31
MIR3960-201ENST00000583311 SH2D6Q7Z4S9 175 aa16.99■□□□□ 0.31
MIR3960-201ENST00000583311 ISOC2Q96AB3 205 aa16.99■□□□□ 0.31
MIR3960-201ENST00000583311 AP1S3Q96PC3 154 aa16.99■□□□□ 0.31
MIR3960-201ENST00000583311 NACAE9PAV3 2078 aa16.99■□□□□ 0.31
MIR3960-201ENST00000583311 A0A087WWL8 130 aa16.98■□□□□ 0.31
MIR3960-201ENST00000583311 CRYGDP07320 174 aa16.98■□□□□ 0.31
MIR3960-201ENST00000583311 SMIM17P0DL12 118 aa16.98■□□□□ 0.31
MIR3960-201ENST00000583311 CTRLP40313 264 aa16.98■□□□□ 0.31
MIR3960-201ENST00000583311 SSTP61278 116 aa16.98■□□□□ 0.31
MIR3960-201ENST00000583311 NEGR1Q7Z3B1 354 aa16.98■□□□□ 0.31
MIR3960-201ENST00000583311 UQCC3Q6UW78 93 aa16.97■□□□□ 0.31
MIR3960-201ENST00000583311 VPS13DQ5THJ4 4388 aa16.96■□□□□ 0.31
MIR3960-201ENST00000583311 TRGC1P0CF51 173 aa16.95■□□□□ 0.3
MIR3960-201ENST00000583311 ESRGQ1W209 222 aa16.95■□□□□ 0.3
MIR3960-201ENST00000583311 TSKUQ8WUA8 353 aa16.95■□□□□ 0.3
MIR3960-201ENST00000583311 GFRA4Q9GZZ7 299 aa16.95■□□□□ 0.3
MIR3960-201ENST00000583311 LINC00588Q9Y4M8 146 aa16.95■□□□□ 0.3
MIR3960-201ENST00000583311 FAM231BA6NCW3 169 aa16.94■□□□□ 0.3
MIR3960-201ENST00000583311 RAB4BP61018 213 aa16.94■□□□□ 0.3
MIR3960-201ENST00000583311 C14orf178Q8N769 122 aaPredicted RBP16.94■□□□□ 0.3
MIR3960-201ENST00000583311 OR10G8Q8NGN5 311 aa16.94■□□□□ 0.3
MIR3960-201ENST00000583311 GTSF1Q8WW33 167 aa16.94■□□□□ 0.3
MIR3960-201ENST00000583311 BORCS7Q96B45 105 aa16.94■□□□□ 0.3
MIR3960-201ENST00000583311 CNFNQ9BYD5 112 aa16.94■□□□□ 0.3
MIR3960-201ENST00000583311 LOC100131303A0A0U1RQF7 123 aa16.93■□□□□ 0.3
MIR3960-201ENST00000583311 NTF3P20783 257 aa16.93■□□□□ 0.3
MIR3960-201ENST00000583311 FOXA3P55318 350 aaPredicted RBP16.93■□□□□ 0.3
MIR3960-201ENST00000583311 ZNF56Q15929 161 aa16.93■□□□□ 0.3
MIR3960-201ENST00000583311 Q6ZSN1 163 aa16.93■□□□□ 0.3
MIR3960-201ENST00000583311 MRPS16Q9Y3D3 137 aaKnown RBP16.92■□□□□ 0.3
MIR3960-201ENST00000583311 V9GYV3 84 aa16.92■□□□□ 0.3
MIR3960-201ENST00000583311 PNRC1Q12796 327 aaPredicted RBP16.91■□□□□ 0.3
MIR3960-201ENST00000583311 TWIST1Q15672 202 aa16.91■□□□□ 0.3
MIR3960-201ENST00000583311 UPK3BQ9BT76 320 aa16.91■□□□□ 0.3
MIR3960-201ENST00000583311 MSRB1Q9NZV6 116 aa16.91■□□□□ 0.3
MIR3960-201ENST00000583311 RYR2Q92736 4967 aa16.91■□□□□ 0.3
MIR3960-201ENST00000583311 TRBV10-1A0A0K0K1A3 114 aa16.9■□□□□ 0.3
MIR3960-201ENST00000583311 F5H697 171 aa16.9■□□□□ 0.3
MIR3960-201ENST00000583311 LYPD5Q6UWN5 251 aa16.9■□□□□ 0.3
MIR3960-201ENST00000583311 SMIM15Q7Z3B0 74 aa16.9■□□□□ 0.3
MIR3960-201ENST00000583311 PGLYRP4Q96LB8 373 aa16.9■□□□□ 0.3
MIR3960-201ENST00000583311 HIGD1CA8MV81 97 aa16.89■□□□□ 0.29
MIR3960-201ENST00000583311 COMMD7Q86VX2 200 aa16.89■□□□□ 0.29
MIR3960-201ENST00000583311 ZNRF2Q8NHG8 242 aa16.89■□□□□ 0.29
MIR3960-201ENST00000583311 KIF25-AS1Q9Y6Z4 181 aa16.89■□□□□ 0.29
MIR3960-201ENST00000583311 DPH3P1Q9H4G8 78 aa16.88■□□□□ 0.29
MIR3960-201ENST00000583311 RYR3Q15413 4870 aa16.88■□□□□ 0.29
MIR3960-201ENST00000583311 LINC00862A6NCI5 91 aa16.87■□□□□ 0.29
MIR3960-201ENST00000583311 GAGE12JA6NER3 117 aa16.87■□□□□ 0.29
MIR3960-201ENST00000583311 TIRAPP58753 221 aa16.87■□□□□ 0.29
MIR3960-201ENST00000583311 GAGE1Q13065 139 aa16.87■□□□□ 0.29
MIR3960-201ENST00000583311 GAGE4Q13068 117 aa16.87■□□□□ 0.29
MIR3960-201ENST00000583311 GAGE5Q13069 117 aa16.87■□□□□ 0.29
MIR3960-201ENST00000583311 GAGE13Q4V321 117 aa16.87■□□□□ 0.29
MIR3960-201ENST00000583311 ATP6V0E2Q8NHE4 81 aa16.87■□□□□ 0.29
MIR3960-201ENST00000583311 HYDINQ4G0P3 5121 aa16.86■□□□□ 0.29
MIR3960-201ENST00000583311 MGPP08493 103 aa16.86■□□□□ 0.29
MIR3960-201ENST00000583311 EVI2AP22794 236 aa16.86■□□□□ 0.29
MIR3960-201ENST00000583311 RPL36AP83881 106 aaKnown RBP16.86■□□□□ 0.29
MIR3960-201ENST00000583311 RPL36ALQ969Q0 106 aaKnown RBP16.86■□□□□ 0.29
MIR3960-201ENST00000583311 NAT8BQ9UHF3 227 aa16.86■□□□□ 0.29
MIR3960-201ENST00000583311 A0A1B0GUT8 65 aa16.85■□□□□ 0.29
MIR3960-201ENST00000583311 TMEM218A2RU14 115 aa16.85■□□□□ 0.29
MIR3960-201ENST00000583311 H7C1H1 209 aa16.85■□□□□ 0.29
MIR3960-201ENST00000583311 PPP1R2P9O14990 202 aa16.85■□□□□ 0.29
MIR3960-201ENST00000583311 Q9H8V8 135 aa16.85■□□□□ 0.29
MIR3960-201ENST00000583311 IGLV2-18A0A075B6J9 118 aa16.84■□□□□ 0.29
MIR3960-201ENST00000583311 F8W036 122 aa16.84■□□□□ 0.29
MIR3960-201ENST00000583311 LINC00315P59091 139 aa16.84■□□□□ 0.29
MIR3960-201ENST00000583311 GTSF1LQ9H1H1 148 aa16.84■□□□□ 0.29
MIR3960-201ENST00000583311 LINC00694P0DN24 101 aa16.83■□□□□ 0.28
MIR3960-201ENST00000583311 KMT2AQ03164 3969 aa16.82■□□□□ 0.28
MIR3960-201ENST00000583311 TRBV7-3A0A075B6L6 115 aa16.82■□□□□ 0.28
MIR3960-201ENST00000583311 SMIM27A0A1W2PRY6 76 aa16.82■□□□□ 0.28
MIR3960-201ENST00000583311 RIGQ13278 110 aa16.82■□□□□ 0.28
MIR3960-201ENST00000583311 NUP35Q8NFH5 326 aa16.82■□□□□ 0.28
MIR3960-201ENST00000583311 MT-ND4LP03901 98 aa16.81■□□□□ 0.28
MIR3960-201ENST00000583311 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.81■□□□□ 0.28
MIR3960-201ENST00000583311 DNAH6Q9C0G6 4158 aa16.81■□□□□ 0.28
MIR3960-201ENST00000583311 M0R2N4 97 aa16.8■□□□□ 0.28
MIR3960-201ENST00000583311 SIVA1O15304 175 aa16.8■□□□□ 0.28
MIR3960-201ENST00000583311 TTC32Q5I0X7 151 aa16.8■□□□□ 0.28
MIR3960-201ENST00000583311 ANAPC16Q96DE5 110 aa16.8■□□□□ 0.28
MIR3960-201ENST00000583311 SEC11CQ9BY50 192 aa16.8■□□□□ 0.28
MIR3960-201ENST00000583311 Q9UF83 564 aa16.8■□□□□ 0.28
MIR3960-201ENST00000583311 TRAV8-6A0A0B4J262 113 aa16.79■□□□□ 0.28
MIR3960-201ENST00000583311 LELP1Q5T871 98 aa16.79■□□□□ 0.28
MIR3960-201ENST00000583311 SUMO4Q6EEV6 95 aa16.79■□□□□ 0.28
MIR3960-201ENST00000583311 NEXN-AS1Q8NBZ9 246 aa16.79■□□□□ 0.28
MIR3960-201ENST00000583311 A0A087WWC5 75 aa16.78■□□□□ 0.28
MIR3960-201ENST00000583311 NBDYA0A0U1RRE5 68 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms