RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 CBY3A6NI87 242 aa10.08□□□□□ -0.8
CDK5RAP3-219ENST00000580670 H3BVH4 76 aa10.08□□□□□ -0.8
CDK5RAP3-219ENST00000580670 K7EP13 123 aa10.08□□□□□ -0.8
CDK5RAP3-219ENST00000580670 HSBP1O75506 76 aa10.08□□□□□ -0.8
CDK5RAP3-219ENST00000580670 APOC4P55056 127 aa10.08□□□□□ -0.8
CDK5RAP3-219ENST00000580670 UBE2V1Q13404 147 aa10.08□□□□□ -0.8
CDK5RAP3-219ENST00000580670 TIMM8BQ9Y5J9 83 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP3-219ENST00000580670 COX11Q9Y6N1 276 aa10.08□□□□□ -0.8
CDK5RAP3-219ENST00000580670 MGAM2Q2M2H8 2515 aa10.07□□□□□ -0.8
CDK5RAP3-219ENST00000580670 MUC21A0A0G2JKD1 596 aa10.07□□□□□ -0.8
CDK5RAP3-219ENST00000580670 MUC21A0A140T8X8 626 aa10.07□□□□□ -0.8
CDK5RAP3-219ENST00000580670 CCL25O15444 150 aa10.07□□□□□ -0.8
CDK5RAP3-219ENST00000580670 NTF3P20783 257 aa10.07□□□□□ -0.8
CDK5RAP3-219ENST00000580670 CSNK1G2-AS1Q8NCQ2 148 aa10.07□□□□□ -0.8
CDK5RAP3-219ENST00000580670 KIR2DL5BQ8NHK3 375 aa10.07□□□□□ -0.8
CDK5RAP3-219ENST00000580670 DNAH3Q8TD57 4116 aa10.06□□□□□ -0.8
CDK5RAP3-219ENST00000580670 TRGV11A0A075B6L2 103 aa10.06□□□□□ -0.8
CDK5RAP3-219ENST00000580670 IGHV3-16A0A0C4DH30 117 aa10.06□□□□□ -0.8
CDK5RAP3-219ENST00000580670 A0A1B0GUT8 65 aa10.06□□□□□ -0.8
CDK5RAP3-219ENST00000580670 PRM2P04554 102 aa10.06□□□□□ -0.8
CDK5RAP3-219ENST00000580670 ARMS2P0C7Q2 107 aa10.06□□□□□ -0.8
CDK5RAP3-219ENST00000580670 RNASE3P12724 160 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-219ENST00000580670 LINC00467Q9BRT7 94 aa10.06□□□□□ -0.8
CDK5RAP3-219ENST00000580670 NOTCH1P46531 2555 aa10.06□□□□□ -0.8
CDK5RAP3-219ENST00000580670 SNAI2O43623 268 aa10.06□□□□□ -0.8
CDK5RAP3-219ENST00000580670 OR5AL1P0C617 328 aa10.06□□□□□ -0.8
CDK5RAP3-219ENST00000580670 PTTG1IPP53801 180 aa10.06□□□□□ -0.8
CDK5RAP3-219ENST00000580670 SSBP4Q9BWG4 385 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-219ENST00000580670 MDFICQ9P1T7 246 aa10.06□□□□□ -0.8
CDK5RAP3-219ENST00000580670 MED14OSP0DP75 135 aa10.05□□□□□ -0.8
CDK5RAP3-219ENST00000580670 RIGQ13278 110 aa10.05□□□□□ -0.8
CDK5RAP3-219ENST00000580670 KPRPQ5T749 579 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-219ENST00000580670 CHCHD1Q96BP2 118 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-219ENST00000580670 A8MZ25 164 aa10.04□□□□□ -0.8
CDK5RAP3-219ENST00000580670 SPRY2O43597 315 aa10.04□□□□□ -0.8
CDK5RAP3-219ENST00000580670 MAJINQ3KP22 176 aa10.04□□□□□ -0.8
CDK5RAP3-219ENST00000580670 OR10AG1Q8NH19 301 aa10.04□□□□□ -0.8
CDK5RAP3-219ENST00000580670 URB1-AS1Q96HZ7 61 aa10.04□□□□□ -0.8
CDK5RAP3-219ENST00000580670 TMEM70Q9BUB7 260 aa10.04□□□□□ -0.8
CDK5RAP3-219ENST00000580670 ST20Q9HBF5 79 aa10.04□□□□□ -0.8
CDK5RAP3-219ENST00000580670 PHLDA3Q9Y5J5 127 aa10.04□□□□□ -0.8
CDK5RAP3-219ENST00000580670 NBEAL1Q6ZS30 2694 aa10.04□□□□□ -0.8
CDK5RAP3-219ENST00000580670 PRB2P02812 416 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 PCP4P48539 62 aa10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 HINT1P49773 126 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 CAMPP49913 170 aa10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 HBBP68871 147 aa10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 CNFNQ9BYD5 112 aa10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 SCRT2Q9NQ03 307 aa10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 AZU1P20160 251 aa10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 RBX1P62877 108 aa10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 CACNG7P62955 275 aa10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 TWIST1Q15672 202 aa10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 ANKRD39Q53RE8 183 aa10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 SPANXN1Q5VSR9 72 aa10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 ATOH7Q8N100 152 aa10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 C9orf85Q96MD7 179 aa10.03□□□□□ -0.8
CDK5RAP3-219ENST00000580670 A0A1B0GW15 77 aa10.02□□□□□ -0.81
CDK5RAP3-219ENST00000580670 ZNF415Q09FC8 603 aa10.02□□□□□ -0.81
CDK5RAP3-219ENST00000580670 DEFB135Q30KP9 77 aa10.02□□□□□ -0.81
CDK5RAP3-219ENST00000580670 RNASEKQ6P5S7 137 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-219ENST00000580670 M0R381 172 aa10.01□□□□□ -0.81
CDK5RAP3-219ENST00000580670 SPATA12Q7Z6I5 190 aa10.01□□□□□ -0.81
CDK5RAP3-219ENST00000580670 MSRB1Q9NZV6 116 aa10.01□□□□□ -0.81
CDK5RAP3-219ENST00000580670 RRN3P1Q2M238 152 aa10.01□□□□□ -0.81
CDK5RAP3-219ENST00000580670 C11orf72Q8NBR9 251 aa10.01□□□□□ -0.81
CDK5RAP3-219ENST00000580670 RNASE8Q8TDE3 154 aaKnown RBP10.01□□□□□ -0.81
CDK5RAP3-219ENST00000580670 MUC4Q99102 2169 aa10□□□□□ -0.81
CDK5RAP3-219ENST00000580670 IGHV4-4A0A075B6R2 117 aa10□□□□□ -0.81
CDK5RAP3-219ENST00000580670 SYS1-DBNDD2H3BUS1 97 aa10□□□□□ -0.81
CDK5RAP3-219ENST00000580670 TMEM263Q8WUH6 116 aaKnown RBP10□□□□□ -0.81
CDK5RAP3-219ENST00000580670 K7EIL1 84 aa9.99□□□□□ -0.81
CDK5RAP3-219ENST00000580670 C16orf74Q96GX8 76 aa9.99□□□□□ -0.81
CDK5RAP3-219ENST00000580670 NXPH4O95158 308 aa9.98□□□□□ -0.81
CDK5RAP3-219ENST00000580670 PET117Q6UWS5 81 aa9.98□□□□□ -0.81
CDK5RAP3-219ENST00000580670 ZNF493Q6ZR52 646 aa9.98□□□□□ -0.81
CDK5RAP3-219ENST00000580670 SYT8Q8NBV8 401 aa9.98□□□□□ -0.81
CDK5RAP3-219ENST00000580670 X6R8D5 127 aa9.98□□□□□ -0.81
CDK5RAP3-219ENST00000580670 IGHV1-24A0A0C4DH33 117 aa9.98□□□□□ -0.81
CDK5RAP3-219ENST00000580670 OR11H2Q8NH07 326 aa9.98□□□□□ -0.81
CDK5RAP3-219ENST00000580670 RNF183Q96D59 192 aa9.98□□□□□ -0.81
CDK5RAP3-219ENST00000580670 SPXQ9BT56 116 aa9.98□□□□□ -0.81
CDK5RAP3-219ENST00000580670 NBEAL2Q6ZNJ1 2754 aa9.98□□□□□ -0.81
CDK5RAP3-219ENST00000580670 SMIM9A6NGZ8 99 aa9.97□□□□□ -0.81
CDK5RAP3-219ENST00000580670 M0R2P5 195 aa9.97□□□□□ -0.81
CDK5RAP3-219ENST00000580670 ZNF876PQ49A33 203 aa9.97□□□□□ -0.81
CDK5RAP3-219ENST00000580670 DEFB121Q5J5C9 76 aa9.97□□□□□ -0.81
CDK5RAP3-219ENST00000580670 SMIM15Q7Z3B0 74 aa9.97□□□□□ -0.81
CDK5RAP3-219ENST00000580670 GATD1Q8NB37 220 aa9.97□□□□□ -0.81
CDK5RAP3-219ENST00000580670 TMEM191AQ9H0A3 160 aa9.97□□□□□ -0.81
CDK5RAP3-219ENST00000580670 TAX1BP3O14907 124 aa9.96□□□□□ -0.81
CDK5RAP3-219ENST00000580670 LEPROTL1O95214 131 aa9.96□□□□□ -0.81
CDK5RAP3-219ENST00000580670 EVI2AP22794 236 aa9.96□□□□□ -0.81
CDK5RAP3-219ENST00000580670 Q6ZVH6 145 aa9.96□□□□□ -0.81
CDK5RAP3-219ENST00000580670 IL17DQ8TAD2 202 aa9.96□□□□□ -0.81
CDK5RAP3-219ENST00000580670 DNHD1Q96M86 4753 aa9.96□□□□□ -0.82
CDK5RAP3-219ENST00000580670 PLAC8L1A1L4L8 177 aa9.96□□□□□ -0.82
CDK5RAP3-219ENST00000580670 BVES-AS1Q5T3Y7 98 aa9.96□□□□□ -0.82
CDK5RAP3-219ENST00000580670 SLC25A34Q6PIV7 304 aa9.96□□□□□ -0.82
CDK5RAP3-219ENST00000580670 AP1S3Q96PC3 154 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms