RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 CIDEAO60543 219 aa8.43□□□□□ -1.06
SNORD3C-201ENST00000580533 SPINK4O60575 86 aa8.43□□□□□ -1.06
SNORD3C-201ENST00000580533 SPANXN1Q5VSR9 72 aa8.43□□□□□ -1.06
SNORD3C-201ENST00000580533 CDPF1Q6NVV7 123 aa8.43□□□□□ -1.06
SNORD3C-201ENST00000580533 PLAC8L1A1L4L8 177 aa8.42□□□□□ -1.06
SNORD3C-201ENST00000580533 DEFB4AO15263 64 aa8.42□□□□□ -1.06
SNORD3C-201ENST00000580533 SNAI2O43623 268 aa8.42□□□□□ -1.06
SNORD3C-201ENST00000580533 NUPR1O60356 82 aa8.42□□□□□ -1.06
SNORD3C-201ENST00000580533 RNASE3P12724 160 aaKnown RBP8.42□□□□□ -1.06
SNORD3C-201ENST00000580533 LINC00310P59036 64 aa8.42□□□□□ -1.06
SNORD3C-201ENST00000580533 RAB4BP61018 213 aa8.42□□□□□ -1.06
SNORD3C-201ENST00000580533 ZNF876PQ49A33 203 aa8.42□□□□□ -1.06
SNORD3C-201ENST00000580533 SMIM15Q7Z3B0 74 aa8.42□□□□□ -1.06
SNORD3C-201ENST00000580533 NUP35Q8NFH5 326 aa8.42□□□□□ -1.06
SNORD3C-201ENST00000580533 RASL10AQ92737 203 aa8.42□□□□□ -1.06
SNORD3C-201ENST00000580533 SSBP4Q9BWG4 385 aaPredicted RBP8.42□□□□□ -1.06
SNORD3C-201ENST00000580533 SCRT2Q9NQ03 307 aa8.42□□□□□ -1.06
SNORD3C-201ENST00000580533 A0A1B0GXF2 115 aa8.41□□□□□ -1.06
SNORD3C-201ENST00000580533 A8MWV9 139 aa8.41□□□□□ -1.06
SNORD3C-201ENST00000580533 APCSP02743 223 aa8.41□□□□□ -1.06
SNORD3C-201ENST00000580533 PRM2P04554 102 aa8.41□□□□□ -1.06
SNORD3C-201ENST00000580533 IGLC6P0CF74 106 aa8.41□□□□□ -1.06
SNORD3C-201ENST00000580533 DEFB130BP0DP73 79 aa8.41□□□□□ -1.06
SNORD3C-201ENST00000580533 DEFB130AP0DP74 79 aa8.41□□□□□ -1.06
SNORD3C-201ENST00000580533 CTRLP40313 264 aa8.41□□□□□ -1.06
SNORD3C-201ENST00000580533 FOXA3P55318 350 aaPredicted RBP8.41□□□□□ -1.06
SNORD3C-201ENST00000580533 IQCJQ1A5X6 159 aa8.41□□□□□ -1.06
SNORD3C-201ENST00000580533 C18orf15Q96N68 181 aa8.41□□□□□ -1.06
SNORD3C-201ENST00000580533 A0A1B0GW15 77 aa8.4□□□□□ -1.06
SNORD3C-201ENST00000580533 HIGD1CA8MV81 97 aa8.4□□□□□ -1.06
SNORD3C-201ENST00000580533 TSTD3H0UI37 97 aa8.4□□□□□ -1.06
SNORD3C-201ENST00000580533 M0R381 172 aa8.4□□□□□ -1.06
SNORD3C-201ENST00000580533 RHODO00212 210 aa8.4□□□□□ -1.06
SNORD3C-201ENST00000580533 SERF1AO75920 110 aa8.4□□□□□ -1.06
SNORD3C-201ENST00000580533 SMIM17P0DL12 118 aa8.4□□□□□ -1.06
SNORD3C-201ENST00000580533 MRPL54Q6P161 138 aaKnown RBP8.4□□□□□ -1.06
SNORD3C-201ENST00000580533 BAGE3Q86Y29 109 aa8.4□□□□□ -1.06
SNORD3C-201ENST00000580533 AP1S3Q96PC3 154 aa8.4□□□□□ -1.06
SNORD3C-201ENST00000580533 MRPL16Q9NX20 251 aaKnown RBP8.4□□□□□ -1.06
SNORD3C-201ENST00000580533 TRAV4A0A0B4J268 109 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 A0A1B0GUT8 65 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 GAGE12BA1L429 117 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 GAGE7O76087 117 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 ATP5G1P05496 136 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 GAGE12FP0CL80 117 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 GAGE12GP0CL81 117 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 GAGE12IP0CL82 117 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 SLAQ13239 276 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 RIGQ13278 110 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 LYZL1Q6UWQ5 148 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 Q6ZTI0 123 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 LINC00612Q8N6U2 182 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 OR4C5Q8NGB2 326 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 CNFNQ9BYD5 112 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 EDA2RQ9HAV5 297 aa8.39□□□□□ -1.07
SNORD3C-201ENST00000580533 IGHV4-4A0A075B6R2 117 aa8.38□□□□□ -1.07
SNORD3C-201ENST00000580533 NXPH4O95158 308 aa8.38□□□□□ -1.07
SNORD3C-201ENST00000580533 TWIST1Q15672 202 aa8.38□□□□□ -1.07
SNORD3C-201ENST00000580533 OR10AG1Q8NH19 301 aa8.38□□□□□ -1.07
SNORD3C-201ENST00000580533 PGLYRP4Q96LB8 373 aa8.38□□□□□ -1.07
SNORD3C-201ENST00000580533 CELA1Q9UNI1 258 aa8.38□□□□□ -1.07
SNORD3C-201ENST00000580533 NBEAL2Q6ZNJ1 2754 aa8.38□□□□□ -1.07
SNORD3C-201ENST00000580533 PRKDCP78527 4128 aaKnown RBP8.37□□□□□ -1.07
SNORD3C-201ENST00000580533 TRAV10A0A0B4J240 114 aa8.37□□□□□ -1.07
SNORD3C-201ENST00000580533 SRIP30626 198 aa8.37□□□□□ -1.07
SNORD3C-201ENST00000580533 ZFP2Q6ZN57 461 aa8.37□□□□□ -1.07
SNORD3C-201ENST00000580533 ZNF664Q8N3J9 261 aa8.37□□□□□ -1.07
SNORD3C-201ENST00000580533 GTSF1Q8WW33 167 aa8.37□□□□□ -1.07
SNORD3C-201ENST00000580533 WWC2-AS2Q96NR7 200 aa8.37□□□□□ -1.07
SNORD3C-201ENST00000580533 TRGV4A0A0C4DH28 118 aa8.36□□□□□ -1.07
SNORD3C-201ENST00000580533 RS1O15537 224 aa8.36□□□□□ -1.07
SNORD3C-201ENST00000580533 NTF3P20783 257 aa8.36□□□□□ -1.07
SNORD3C-201ENST00000580533 DDTP30046 118 aa8.36□□□□□ -1.07
SNORD3C-201ENST00000580533 NANOS2P60321 138 aaKnown RBP8.36□□□□□ -1.07
SNORD3C-201ENST00000580533 HBBP68871 147 aa8.36□□□□□ -1.07
SNORD3C-201ENST00000580533 C12orf74Q32Q52 190 aa8.36□□□□□ -1.07
SNORD3C-201ENST00000580533 DMRTA1Q5VZB9 504 aa8.36□□□□□ -1.07
SNORD3C-201ENST00000580533 GATD1Q8NB37 220 aa8.36□□□□□ -1.07
SNORD3C-201ENST00000580533 C18orf32Q8TCD1 76 aa8.36□□□□□ -1.07
SNORD3C-201ENST00000580533 ALKBH7Q9BT30 221 aaPredicted RBP8.36□□□□□ -1.07
SNORD3C-201ENST00000580533 DNAH9Q9NYC9 4486 aa8.36□□□□□ -1.07
SNORD3C-201ENST00000580533 NUPR2A6NF83 97 aa8.35□□□□□ -1.07
SNORD3C-201ENST00000580533 SCGB1D1O95968 90 aa8.35□□□□□ -1.07
SNORD3C-201ENST00000580533 KIAA1644Q3SXP7 199 aa8.35□□□□□ -1.07
SNORD3C-201ENST00000580533 CFAP126Q5VTH2 177 aa8.35□□□□□ -1.07
SNORD3C-201ENST00000580533 Q6ZTC4 211 aa8.35□□□□□ -1.07
SNORD3C-201ENST00000580533 ZNF575Q86XF7 245 aa8.35□□□□□ -1.07
SNORD3C-201ENST00000580533 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
SNORD3C-201ENST00000580533 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
SNORD3C-201ENST00000580533 PRO1933Q9H354 126 aa8.35□□□□□ -1.07
SNORD3C-201ENST00000580533 KLK5Q9Y337 293 aaPredicted RBP8.35□□□□□ -1.07
SNORD3C-201ENST00000580533 DEFB131BA0A096LNP1 70 aa8.34□□□□□ -1.07
SNORD3C-201ENST00000580533 F5H768 121 aa8.34□□□□□ -1.07
SNORD3C-201ENST00000580533 HTN3P15516 51 aa8.34□□□□□ -1.07
SNORD3C-201ENST00000580533 SSTP61278 116 aa8.34□□□□□ -1.07
SNORD3C-201ENST00000580533 FAM74A4Q5TZK3 123 aa8.34□□□□□ -1.07
SNORD3C-201ENST00000580533 TEX43Q6ZNM6 134 aa8.34□□□□□ -1.07
SNORD3C-201ENST00000580533 SAMD10Q9BYL1 202 aa8.34□□□□□ -1.07
SNORD3C-201ENST00000580533 DPH3P1Q9H4G8 78 aa8.34□□□□□ -1.07
SNORD3C-201ENST00000580533 HUWE1Q7Z6Z7 4374 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms