RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 RBM38Q9H0Z9 239 aaKnown RBP7.81□□□□□ -1.16
CDK5RAP3-216ENST00000579853 ANGP03950 147 aaKnown RBP7.8□□□□□ -1.16
CDK5RAP3-216ENST00000579853 C15orf54Q8N8G6 183 aa7.8□□□□□ -1.16
CDK5RAP3-216ENST00000579853 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.8□□□□□ -1.16
CDK5RAP3-216ENST00000579853 MRPL18Q9H0U6 180 aaKnown RBP7.8□□□□□ -1.16
CDK5RAP3-216ENST00000579853 JPT2Q9H910 190 aa7.8□□□□□ -1.16
CDK5RAP3-216ENST00000579853 TRBV7-3A0A075B6L6 115 aa7.79□□□□□ -1.16
CDK5RAP3-216ENST00000579853 TRBV6-8A0A0A6YYG3 113 aa7.79□□□□□ -1.16
CDK5RAP3-216ENST00000579853 FABP5P3A8MUU1 101 aa7.79□□□□□ -1.16
CDK5RAP3-216ENST00000579853 UBE2D3P61077 147 aa7.79□□□□□ -1.16
CDK5RAP3-216ENST00000579853 UBE2D2P62837 147 aa7.79□□□□□ -1.16
CDK5RAP3-216ENST00000579853 LRRC37A5PQ49AS3 106 aa7.79□□□□□ -1.16
CDK5RAP3-216ENST00000579853 FAM74A4Q5TZK3 123 aa7.79□□□□□ -1.16
CDK5RAP3-216ENST00000579853 PRNTQ86SH4 94 aa7.79□□□□□ -1.16
CDK5RAP3-216ENST00000579853 OR11H4Q8NGC9 324 aa7.79□□□□□ -1.16
CDK5RAP3-216ENST00000579853 DPH3Q96FX2 82 aa7.79□□□□□ -1.16
CDK5RAP3-216ENST00000579853 SSBP4Q9BWG4 385 aaPredicted RBP7.79□□□□□ -1.16
CDK5RAP3-216ENST00000579853 NDUFA13Q9P0J0 144 aa7.79□□□□□ -1.16
CDK5RAP3-216ENST00000579853 IGKV3D-20A0A0C4DH25 116 aa7.78□□□□□ -1.16
CDK5RAP3-216ENST00000579853 EIF3GO75821 320 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDK5RAP3-216ENST00000579853 CNBPP62633 177 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-216ENST00000579853 DNLZQ5SXM8 178 aa7.78□□□□□ -1.16
CDK5RAP3-216ENST00000579853 C7orf33Q8WU49 177 aa7.78□□□□□ -1.16
CDK5RAP3-216ENST00000579853 LINC01600Q96MT4 127 aa7.78□□□□□ -1.16
CDK5RAP3-216ENST00000579853 HSPB11Q9Y547 144 aa7.78□□□□□ -1.16
CDK5RAP3-216ENST00000579853 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.77□□□□□ -1.17
CDK5RAP3-216ENST00000579853 FAM240BA0A1B0GVZ2 78 aa7.77□□□□□ -1.17
CDK5RAP3-216ENST00000579853 B4DEV8 164 aa7.77□□□□□ -1.17
CDK5RAP3-216ENST00000579853 H0YIZ8 118 aa7.77□□□□□ -1.17
CDK5RAP3-216ENST00000579853 PANO1I0J062 215 aa7.77□□□□□ -1.17
CDK5RAP3-216ENST00000579853 PET100P0DJ07 73 aa7.77□□□□□ -1.17
CDK5RAP3-216ENST00000579853 ARL14EPLP0DKL9 152 aa7.77□□□□□ -1.17
CDK5RAP3-216ENST00000579853 MPV17L2Q567V2 206 aa7.77□□□□□ -1.17
CDK5RAP3-216ENST00000579853 OR10G8Q8NGN5 311 aa7.77□□□□□ -1.17
CDK5RAP3-216ENST00000579853 SFRP2Q96HF1 295 aa7.77□□□□□ -1.17
CDK5RAP3-216ENST00000579853 EPDR1Q9UM22 224 aa7.77□□□□□ -1.17
CDK5RAP3-216ENST00000579853 IGHV3-64A0A075B6Q5 118 aa7.76□□□□□ -1.17
CDK5RAP3-216ENST00000579853 H3BVH4 76 aa7.76□□□□□ -1.17
CDK5RAP3-216ENST00000579853 SIX6O95475 246 aa7.76□□□□□ -1.17
CDK5RAP3-216ENST00000579853 ARMS2P0C7Q2 107 aa7.76□□□□□ -1.17
CDK5RAP3-216ENST00000579853 RAB2AP61019 212 aa7.76□□□□□ -1.17
CDK5RAP3-216ENST00000579853 SUMO1P63165 101 aaKnown RBP7.76□□□□□ -1.17
CDK5RAP3-216ENST00000579853 TMEM97Q5BJF2 176 aa7.76□□□□□ -1.17
CDK5RAP3-216ENST00000579853 SUN5Q8TC36 379 aa7.76□□□□□ -1.17
CDK5RAP3-216ENST00000579853 PRR34Q9NV39 138 aa7.76□□□□□ -1.17
CDK5RAP3-216ENST00000579853 PHLDA3Q9Y5J5 127 aa7.76□□□□□ -1.17
CDK5RAP3-216ENST00000579853 A0A087WWL8 130 aa7.75□□□□□ -1.17
CDK5RAP3-216ENST00000579853 A0A087WYN8 130 aa7.75□□□□□ -1.17
CDK5RAP3-216ENST00000579853 HMGB3O15347 200 aaKnown RBP7.75□□□□□ -1.17
CDK5RAP3-216ENST00000579853 PTTG1O95997 202 aa7.75□□□□□ -1.17
CDK5RAP3-216ENST00000579853 STAG3L2P0CL84 134 aa7.75□□□□□ -1.17
CDK5RAP3-216ENST00000579853 STAG3L3P0CL85 134 aa7.75□□□□□ -1.17
CDK5RAP3-216ENST00000579853 TPT1P13693 172 aaKnown RBP7.75□□□□□ -1.17
CDK5RAP3-216ENST00000579853 CDC34P49427 236 aaPredicted RBP7.75□□□□□ -1.17
CDK5RAP3-216ENST00000579853 PPP1R1CQ8WVI7 109 aa7.75□□□□□ -1.17
CDK5RAP3-216ENST00000579853 CHCHD5Q9BSY4 110 aa7.75□□□□□ -1.17
CDK5RAP3-216ENST00000579853 TMEM167BQ9NRX6 74 aa7.75□□□□□ -1.17
CDK5RAP3-216ENST00000579853 AP5S1Q9NUS5 200 aa7.75□□□□□ -1.17
CDK5RAP3-216ENST00000579853 A6NHS1 94 aa7.74□□□□□ -1.17
CDK5RAP3-216ENST00000579853 RPL12P30050 165 aaKnown RBP7.74□□□□□ -1.17
CDK5RAP3-216ENST00000579853 MZT2BQ6NZ67 158 aa7.74□□□□□ -1.17
CDK5RAP3-216ENST00000579853 ZFP82Q8N141 532 aa7.74□□□□□ -1.17
CDK5RAP3-216ENST00000579853 SMIM3Q9BZL3 60 aa7.74□□□□□ -1.17
CDK5RAP3-216ENST00000579853 A0A0J9YXV3 536 aa7.73□□□□□ -1.17
CDK5RAP3-216ENST00000579853 hDV102S1A0JD36 115 aa7.73□□□□□ -1.17
CDK5RAP3-216ENST00000579853 KRBOX1C9JBD0 128 aa7.73□□□□□ -1.17
CDK5RAP3-216ENST00000579853 M0R381 172 aa7.73□□□□□ -1.17
CDK5RAP3-216ENST00000579853 GCHFRP30047 84 aa7.73□□□□□ -1.17
CDK5RAP3-216ENST00000579853 RAB4BP61018 213 aa7.73□□□□□ -1.17
CDK5RAP3-216ENST00000579853 XP32Q5T750 250 aa7.73□□□□□ -1.17
CDK5RAP3-216ENST00000579853 SPACA4Q8TDM5 124 aa7.73□□□□□ -1.17
CDK5RAP3-216ENST00000579853 CCDC32Q9BV29 185 aa7.73□□□□□ -1.17
CDK5RAP3-216ENST00000579853 PLAC8Q9NZF1 115 aa7.73□□□□□ -1.17
CDK5RAP3-216ENST00000579853 ARL2-SNX15V9GYD0 113 aa7.73□□□□□ -1.17
CDK5RAP3-216ENST00000579853 PHOX2AO14813 284 aa7.72□□□□□ -1.17
CDK5RAP3-216ENST00000579853 MPC2O95563 127 aa7.72□□□□□ -1.17
CDK5RAP3-216ENST00000579853 MBP02144 154 aa7.72□□□□□ -1.17
CDK5RAP3-216ENST00000579853 WDR73Q6P4I2 378 aa7.72□□□□□ -1.17
CDK5RAP3-216ENST00000579853 KRTAP26-1Q6PEX3 210 aa7.72□□□□□ -1.17
CDK5RAP3-216ENST00000579853 LINC00269Q8N2A0 174 aa7.72□□□□□ -1.17
CDK5RAP3-216ENST00000579853 RAB24Q969Q5 203 aa7.72□□□□□ -1.17
CDK5RAP3-216ENST00000579853 TRAV8-4A0A0B4J246 113 aa7.71□□□□□ -1.18
CDK5RAP3-216ENST00000579853 A0A1W2PRE2 83 aa7.71□□□□□ -1.18
CDK5RAP3-216ENST00000579853 M0R036 132 aa7.71□□□□□ -1.18
CDK5RAP3-216ENST00000579853 GAS8-AS1O95177 125 aa7.71□□□□□ -1.18
CDK5RAP3-216ENST00000579853 CXorf1O96002 111 aa7.71□□□□□ -1.18
CDK5RAP3-216ENST00000579853 P01737 135 aa7.71□□□□□ -1.18
CDK5RAP3-216ENST00000579853 GZMBP10144 247 aa7.71□□□□□ -1.18
CDK5RAP3-216ENST00000579853 REG3GQ6UW15 175 aa7.71□□□□□ -1.18
CDK5RAP3-216ENST00000579853 NEXN-AS1Q8NBZ9 246 aa7.71□□□□□ -1.18
CDK5RAP3-216ENST00000579853 BATF3Q9NR55 127 aa7.71□□□□□ -1.18
CDK5RAP3-216ENST00000579853 KIF25-AS1Q9Y6Z4 181 aa7.71□□□□□ -1.18
CDK5RAP3-216ENST00000579853 GRIFINA4D1Z8 144 aa7.7□□□□□ -1.18
CDK5RAP3-216ENST00000579853 IFNA7P01567 189 aa7.7□□□□□ -1.18
CDK5RAP3-216ENST00000579853 RBX1P62877 108 aa7.7□□□□□ -1.18
CDK5RAP3-216ENST00000579853 ZNF56Q15929 161 aa7.7□□□□□ -1.18
CDK5RAP3-216ENST00000579853 FAM162BQ5T6X4 162 aa7.7□□□□□ -1.18
CDK5RAP3-216ENST00000579853 PRR27Q6MZM9 219 aa7.7□□□□□ -1.18
CDK5RAP3-216ENST00000579853 COX8CQ7Z4L0 72 aa7.7□□□□□ -1.18
CDK5RAP3-216ENST00000579853 NKX6-2Q9C056 277 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms