RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 ZNF678Q5SXM1 525 aa1.98□□□□□ -2.09
SMCHD1-202ENST00000577300 GDF5OSQ5U4N7 250 aa1.98□□□□□ -2.09
SMCHD1-202ENST00000577300 FAM104BQ5XKR9 115 aa1.98□□□□□ -2.09
SMCHD1-202ENST00000577300 ZNF563Q8TA94 476 aa1.98□□□□□ -2.09
SMCHD1-202ENST00000577300 NABP2Q9BQ15 211 aa1.98□□□□□ -2.09
SMCHD1-202ENST00000577300 SMIM7Q9BQ49 75 aa1.98□□□□□ -2.09
SMCHD1-202ENST00000577300 NPCDR1Q9BY65 106 aa1.98□□□□□ -2.09
SMCHD1-202ENST00000577300 IL36BQ9NZH7 164 aa1.98□□□□□ -2.09
SMCHD1-202ENST00000577300 ALS2Q96Q42 1657 aa1.98□□□□□ -2.09
SMCHD1-202ENST00000577300 THSD7AQ9UPZ6 1657 aa1.98□□□□□ -2.09
SMCHD1-202ENST00000577300 MCM3APO60318 1980 aa1.98□□□□□ -2.09
SMCHD1-202ENST00000577300 RGPD4Q7Z3J3 1758 aa1.98□□□□□ -2.09
SMCHD1-202ENST00000577300 KCPQ6ZWJ8 1503 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 KMT2EQ8IZD2 1858 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 MYOM1P52179 1685 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 BTAF1O14981 1849 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 IGLV3-12A0A075B6K2 115 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 TRBV7-3A0A075B6L6 115 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 IGKV3D-11A0A0A0MRZ8 115 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 SLC25A20O43772 301 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 ZNF22P17026 224 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 PEBP1P30086 187 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 CKS2P33552 79 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 UBE2AP49459 152 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 RPL30P62888 115 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 S100A7L2Q5SY68 101 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 ATP11AUNQ6ZP68 121 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 LINC00304Q8N9R0 145 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 ZNF714Q96N38 554 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 BPESC1Q9GZL8 116 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 CCL28Q9NRJ3 127 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 GNG13Q9P2W3 67 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 KIDINS220Q9ULH0 1771 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 SNRNP200O75643 2136 aaKnown RBP1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 DOCK8Q8NF50 2099 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 ATG2BQ96BY7 2078 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 COL24A1Q17RW2 1714 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 PKD1L3Q7Z443 1732 aa1.97□□□□□ -2.09
SMCHD1-202ENST00000577300 C2orf16Q68DN1 1984 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 RGPD3A6NKT7 1758 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 RGPD8O14715 1765 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 RGPD5Q99666 1765 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 A0A0B4J2C4 111 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 IGKV1-12A0A0C4DH73 117 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 CEBPZOSA8MTT3 80 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 IQCF6A8MYZ5 107 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 IGKV1D-12P01611 117 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 IL4P05112 153 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 PIRTP0C851 137 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 CD28P10747 220 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 SYCNQ0VAF6 134 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 RHOHQ15669 191 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 SOSTDC1Q6X4U4 206 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 SCXQ7RTU7 201 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 PDPNQ86YL7 162 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 CCL4L1Q8NHW4 92 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 SMCR5Q8TEV8 140 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 SPTSSAQ969W0 71 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 CHCHD1Q96BP2 118 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 C11orf1Q9H5F2 150 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 SAMD9LQ8IVG5 1584 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 RALGAPA2Q2PPJ7 1873 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 PLCH1Q4KWH8 1693 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 CASP8AP2Q9UKL3 1982 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 SCN8AQ9UQD0 1980 aa1.96□□□□□ -2.1
SMCHD1-202ENST00000577300 LRP5O75197 1615 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 UBR1Q8IWV7 1749 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 IGHV1-45A0A0A0MS14 117 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 TRAV13-2A0A0B4J235 113 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 TRBV10-2A0A0K0K1G8 114 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 C10orf142B7Z368 130 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 H3BMM0 161 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 C3orf84H3BNL1 204 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 H3BVH4 76 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 PEX7O00628 323 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 GNRH2O43555 120 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 COX7A2P2O60397 106 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 BCE1O60756 84 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 LEPROTL1O95214 131 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 PPYP01298 95 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 IGHV3-43DP0DP04 118 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 NPPCP23582 126 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 FGF12P61328 243 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 ZNF117Q03924 483 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 BSPH1Q075Z2 132 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 NDUFA11Q86Y39 141 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 LINC00269Q8N2A0 174 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 FAM216BQ8N7L0 139 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 DAND5Q8N907 189 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 UBE2WQ96B02 151 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 IFI27L1Q96BM0 104 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 TAS2R4Q9NYW5 299 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 MRPL35Q9NZE8 188 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 KIAA1671Q9BY89 1806 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 PIK3C2AO00443 1686 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 COL14A1Q05707 1796 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 LTBP4Q8N2S1 1624 aa1.95□□□□□ -2.1
SMCHD1-202ENST00000577300 EXPH5Q8NEV8 1989 aa1.94□□□□□ -2.1
SMCHD1-202ENST00000577300 ZNF236Q9UL36 1845 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms