RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 RMI2Q96E14 147 aa6.54□□□□□ -1.36
NPLOC4-220ENST00000576940 KCNS1Q96KK3 526 aa6.54□□□□□ -1.36
NPLOC4-220ENST00000576940 SGK494Q96LW2 274 aa6.54□□□□□ -1.36
NPLOC4-220ENST00000576940 SAMD10Q9BYL1 202 aa6.54□□□□□ -1.36
NPLOC4-220ENST00000576940 TREM1Q9NP99 234 aa6.54□□□□□ -1.36
NPLOC4-220ENST00000576940 C11orf21Q9P2W6 132 aa6.54□□□□□ -1.36
NPLOC4-220ENST00000576940 ARL2-SNX15V9GYD0 113 aa6.54□□□□□ -1.36
NPLOC4-220ENST00000576940 CTXND1A0A1B0GTU2 59 aa6.53□□□□□ -1.36
NPLOC4-220ENST00000576940 MGST1P10620 155 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-220ENST00000576940 ASIPP42127 132 aa6.53□□□□□ -1.36
NPLOC4-220ENST00000576940 ZNF80P51504 273 aaPredicted RBP6.53□□□□□ -1.36
NPLOC4-220ENST00000576940 RAB2AP61019 212 aa6.53□□□□□ -1.36
NPLOC4-220ENST00000576940 UBE2L3P68036 154 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-220ENST00000576940 ZNF506Q5JVG8 444 aa6.53□□□□□ -1.36
NPLOC4-220ENST00000576940 GOLT1AQ6ZVE7 132 aa6.53□□□□□ -1.36
NPLOC4-220ENST00000576940 UBE2WQ96B02 151 aa6.53□□□□□ -1.36
NPLOC4-220ENST00000576940 CARHSP1Q9Y2V2 147 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-220ENST00000576940 H2AFB1P0C5Y9 115 aa6.52□□□□□ -1.37
NPLOC4-220ENST00000576940 LINC00694P0DN24 101 aa6.52□□□□□ -1.37
NPLOC4-220ENST00000576940 NIT1Q86X76 327 aa6.52□□□□□ -1.37
NPLOC4-220ENST00000576940 CYB561D1Q8N8Q1 229 aa6.52□□□□□ -1.37
NPLOC4-220ENST00000576940 TMEM75Q8N9X5 138 aa6.52□□□□□ -1.37
NPLOC4-220ENST00000576940 SUN5Q8TC36 379 aa6.52□□□□□ -1.37
NPLOC4-220ENST00000576940 C9orf85Q96MD7 179 aa6.52□□□□□ -1.37
NPLOC4-220ENST00000576940 SEC11CQ9BY50 192 aa6.52□□□□□ -1.37
NPLOC4-220ENST00000576940 TMEM218A2RU14 115 aa6.51□□□□□ -1.37
NPLOC4-220ENST00000576940 PANO1I0J062 215 aa6.51□□□□□ -1.37
NPLOC4-220ENST00000576940 GNG5P63218 68 aa6.51□□□□□ -1.37
NPLOC4-220ENST00000576940 ODF1Q14990 250 aa6.51□□□□□ -1.37
NPLOC4-220ENST00000576940 ZNF726P1Q15940 193 aa6.51□□□□□ -1.37
NPLOC4-220ENST00000576940 KHDC3LQ587J8 217 aa6.51□□□□□ -1.37
NPLOC4-220ENST00000576940 C14orf178Q8N769 122 aaPredicted RBP6.51□□□□□ -1.37
NPLOC4-220ENST00000576940 CMTM2Q8TAZ6 248 aa6.51□□□□□ -1.37
NPLOC4-220ENST00000576940 FAM213BQ8TBF2 198 aa6.51□□□□□ -1.37
NPLOC4-220ENST00000576940 ACTR3CQ9C0K3 210 aaPredicted RBP6.51□□□□□ -1.37
NPLOC4-220ENST00000576940 JPT2Q9H910 190 aa6.51□□□□□ -1.37
NPLOC4-220ENST00000576940 OTORQ9NRC9 128 aa6.51□□□□□ -1.37
NPLOC4-220ENST00000576940 URGCP-MRPS24S4R325 110 aa6.51□□□□□ -1.37
NPLOC4-220ENST00000576940 A0A087WWC5 75 aa6.5□□□□□ -1.37
NPLOC4-220ENST00000576940 STAG3L2P0CL84 134 aa6.5□□□□□ -1.37
NPLOC4-220ENST00000576940 STAG3L3P0CL85 134 aa6.5□□□□□ -1.37
NPLOC4-220ENST00000576940 RNASE3P12724 160 aaKnown RBP6.5□□□□□ -1.37
NPLOC4-220ENST00000576940 FHITP49789 147 aa6.5□□□□□ -1.37
NPLOC4-220ENST00000576940 PEA15Q15121 130 aa6.5□□□□□ -1.37
NPLOC4-220ENST00000576940 FFAR4Q5NUL3 377 aa6.5□□□□□ -1.37
NPLOC4-220ENST00000576940 Q6ZRU5 148 aa6.5□□□□□ -1.37
NPLOC4-220ENST00000576940 PTH2Q96A98 100 aa6.5□□□□□ -1.37
NPLOC4-220ENST00000576940 PARLQ9H300 379 aa6.5□□□□□ -1.37
NPLOC4-220ENST00000576940 MANBALQ9NQG1 85 aa6.5□□□□□ -1.37
NPLOC4-220ENST00000576940 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.5□□□□□ -1.37
NPLOC4-220ENST00000576940 MAP1LC3B2A6NCE7 125 aa6.49□□□□□ -1.37
NPLOC4-220ENST00000576940 TMEM250H0YL14 139 aa6.49□□□□□ -1.37
NPLOC4-220ENST00000576940 CDC34P49427 236 aaPredicted RBP6.49□□□□□ -1.37
NPLOC4-220ENST00000576940 ATRAIDQ6UW56 229 aa6.49□□□□□ -1.37
NPLOC4-220ENST00000576940 OR10G9Q8NGN4 311 aa6.49□□□□□ -1.37
NPLOC4-220ENST00000576940 OR10G7Q8NGN6 311 aa6.49□□□□□ -1.37
NPLOC4-220ENST00000576940 RAB24Q969Q5 203 aa6.49□□□□□ -1.37
NPLOC4-220ENST00000576940 LINC00479Q96M42 142 aa6.49□□□□□ -1.37
NPLOC4-220ENST00000576940 MAP1LC3BQ9GZQ8 125 aa6.49□□□□□ -1.37
NPLOC4-220ENST00000576940 A0A087WX48 190 aa6.48□□□□□ -1.37
NPLOC4-220ENST00000576940 GCGP01275 180 aa6.48□□□□□ -1.37
NPLOC4-220ENST00000576940 IFNA1P01562 189 aa6.48□□□□□ -1.37
NPLOC4-220ENST00000576940 BCL2P10415 239 aa6.48□□□□□ -1.37
NPLOC4-220ENST00000576940 FGF8P55075 233 aaPredicted RBP6.48□□□□□ -1.37
NPLOC4-220ENST00000576940 C14orf177Q52M58 125 aa6.48□□□□□ -1.37
NPLOC4-220ENST00000576940 ENHOQ6UWT2 76 aa6.48□□□□□ -1.37
NPLOC4-220ENST00000576940 ZFP2Q6ZN57 461 aa6.48□□□□□ -1.37
NPLOC4-220ENST00000576940 PQLC2Q6ZP29 291 aa6.48□□□□□ -1.37
NPLOC4-220ENST00000576940 SFT2D1Q8WV19 159 aa6.48□□□□□ -1.37
NPLOC4-220ENST00000576940 A8MWV9 139 aa6.47□□□□□ -1.37
NPLOC4-220ENST00000576940 USP17L23D6RBM5 183 aa6.47□□□□□ -1.37
NPLOC4-220ENST00000576940 CXorf1O96002 111 aa6.47□□□□□ -1.37
NPLOC4-220ENST00000576940 PRSS1P07477 247 aa6.47□□□□□ -1.37
NPLOC4-220ENST00000576940 TAS2R45P59539 299 aa6.47□□□□□ -1.37
NPLOC4-220ENST00000576940 ELOBQ15370 118 aa6.47□□□□□ -1.37
NPLOC4-220ENST00000576940 UFSP1Q6NVU6 142 aa6.47□□□□□ -1.37
NPLOC4-220ENST00000576940 C9orf163Q8N9P6 203 aa6.47□□□□□ -1.37
NPLOC4-220ENST00000576940 TCEAL7Q9BRU2 100 aa6.47□□□□□ -1.37
NPLOC4-220ENST00000576940 VAX2Q9UIW0 290 aa6.47□□□□□ -1.37
NPLOC4-220ENST00000576940 LPAP08519 4548 aa6.47□□□□□ -1.37
NPLOC4-220ENST00000576940 IGKV3D-20A0A0C4DH25 116 aa6.46□□□□□ -1.38
NPLOC4-220ENST00000576940 TMEM262E9PQX1 116 aa6.46□□□□□ -1.38
NPLOC4-220ENST00000576940 HMGB3O15347 200 aaKnown RBP6.46□□□□□ -1.38
NPLOC4-220ENST00000576940 ADCYAP1P18509 176 aa6.46□□□□□ -1.38
NPLOC4-220ENST00000576940 CCL20P78556 96 aa6.46□□□□□ -1.38
NPLOC4-220ENST00000576940 Q0VG73 95 aa6.46□□□□□ -1.38
NPLOC4-220ENST00000576940 DMRTA1Q5VZB9 504 aa6.46□□□□□ -1.38
NPLOC4-220ENST00000576940 SDIM1Q6ZPB5 146 aa6.46□□□□□ -1.38
NPLOC4-220ENST00000576940 SVBPQ8N300 66 aa6.46□□□□□ -1.38
NPLOC4-220ENST00000576940 NDFIP1Q9BT67 221 aa6.46□□□□□ -1.38
NPLOC4-220ENST00000576940 C1orf43Q9BWL3 253 aa6.46□□□□□ -1.38
NPLOC4-220ENST00000576940 NKX6-2Q9C056 277 aaPredicted RBP6.46□□□□□ -1.38
NPLOC4-220ENST00000576940 TMEM167BQ9NRX6 74 aa6.46□□□□□ -1.38
NPLOC4-220ENST00000576940 PSG8Q9UQ74 426 aa6.46□□□□□ -1.38
NPLOC4-220ENST00000576940 A0A1W2PPV4 95 aa6.45□□□□□ -1.38
NPLOC4-220ENST00000576940 SRP19P09132 144 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-220ENST00000576940 S100A4P26447 101 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-220ENST00000576940 SRSF3P84103 164 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-220ENST00000576940 MEF2BQ02080 365 aaPredicted RBP6.45□□□□□ -1.38
NPLOC4-220ENST00000576940 FAM74A3Q4VXF1 159 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms