RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 HIVEP3Q5T1R4 2406 aa11.03□□□□□ -0.64
SCARF1-209ENST00000576012 CRYGDP07320 174 aa11.03□□□□□ -0.64
SCARF1-209ENST00000576012 RNF5Q99942 180 aa11.03□□□□□ -0.64
SCARF1-209ENST00000576012 SLC50A1Q9BRV3 221 aa11.03□□□□□ -0.64
SCARF1-209ENST00000576012 CLPSL1A2RUU4 121 aa11.02□□□□□ -0.65
SCARF1-209ENST00000576012 CCDC179H3BU77 68 aa11.02□□□□□ -0.65
SCARF1-209ENST00000576012 IGHV3-11P01762 117 aa11.02□□□□□ -0.65
SCARF1-209ENST00000576012 ZFAND3Q9H8U3 227 aa11.02□□□□□ -0.65
SCARF1-209ENST00000576012 TRAV12-1A0A0B4J245 112 aa11.02□□□□□ -0.65
SCARF1-209ENST00000576012 NPBQ8NG41 125 aa11.02□□□□□ -0.65
SCARF1-209ENST00000576012 TEX49A0A1B0GTD5 131 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 SNCGO76070 127 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 UBE2D3P61077 147 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 UBE2D2P62837 147 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 GAGE2BQ13066 116 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 GAGE2EQ4V326 116 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 CCDC140Q96MF4 163 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 GAGE2DQ9UEU5 116 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 ASIPP42127 132 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 GAGE5Q13069 117 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 GAGE6Q13070 117 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 DPH3P1Q9H4G8 78 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 PRO1854Q9UHT4 67 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 TSHBP01222 138 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 LGALS3P17931 250 aaKnown RBP11.01□□□□□ -0.65
SCARF1-209ENST00000576012 HERVK_113P61574 105 aa11.01□□□□□ -0.65
SCARF1-209ENST00000576012 TTC32Q5I0X7 151 aa11□□□□□ -0.65
SCARF1-209ENST00000576012 C10orf126Q8N4M7 172 aa11□□□□□ -0.65
SCARF1-209ENST00000576012 LINC00477Q96M19 166 aa11□□□□□ -0.65
SCARF1-209ENST00000576012 NACAE9PAV3 2078 aa11□□□□□ -0.65
SCARF1-209ENST00000576012 ZFYVE26Q68DK2 2539 aa11□□□□□ -0.65
SCARF1-209ENST00000576012 COX6B1P14854 86 aa11□□□□□ -0.65
SCARF1-209ENST00000576012 CRYBG3Q68DQ2 2970 aa11□□□□□ -0.65
SCARF1-209ENST00000576012 TRBV12-3P01733 135 aa10.99□□□□□ -0.65
SCARF1-209ENST00000576012 ZNRF2Q8NHG8 242 aa10.99□□□□□ -0.65
SCARF1-209ENST00000576012 RNASE13Q5GAN3 156 aaKnown RBP10.99□□□□□ -0.65
SCARF1-209ENST00000576012 VPS13CQ709C8 3753 aa10.99□□□□□ -0.65
SCARF1-209ENST00000576012 POLQO75417 2590 aa10.99□□□□□ -0.65
SCARF1-209ENST00000576012 SETD2Q9BYW2 2564 aaPredicted RBP10.99□□□□□ -0.65
SCARF1-209ENST00000576012 Q6ZSV7 163 aa10.99□□□□□ -0.65
SCARF1-209ENST00000576012 ATP6V0E2Q8NHE4 81 aa10.99□□□□□ -0.65
SCARF1-209ENST00000576012 IGLV4-69A0A075B6H9 119 aa10.98□□□□□ -0.65
SCARF1-209ENST00000576012 IGHV3-30P01768 117 aa10.98□□□□□ -0.65
SCARF1-209ENST00000576012 IGHV3-30-5P0DP03 117 aa10.98□□□□□ -0.65
SCARF1-209ENST00000576012 LYRM7Q5U5X0 104 aa10.98□□□□□ -0.65
SCARF1-209ENST00000576012 UNQ9165/PRO28630Q6UXU0 137 aa10.98□□□□□ -0.65
SCARF1-209ENST00000576012 Q8N9W7 124 aa10.98□□□□□ -0.65
SCARF1-209ENST00000576012 HTN1P15515 57 aa10.98□□□□□ -0.65
SCARF1-209ENST00000576012 J3QQQ9 107 aa10.97□□□□□ -0.65
SCARF1-209ENST00000576012 OR10J6PQ8NGY7 276 aa10.97□□□□□ -0.65
SCARF1-209ENST00000576012 MUSTN1Q8IVN3 82 aa10.97□□□□□ -0.65
SCARF1-209ENST00000576012 TIMD4Q96H15 378 aa10.97□□□□□ -0.65
SCARF1-209ENST00000576012 NHLRC4P0CG21 123 aaPredicted RBP10.97□□□□□ -0.65
SCARF1-209ENST00000576012 SRSF2Q01130 221 aaKnown RBP10.97□□□□□ -0.65
SCARF1-209ENST00000576012 ZFP36P26651 326 aaKnown RBP10.96□□□□□ -0.65
SCARF1-209ENST00000576012 UBTD1Q9HAC8 227 aa10.96□□□□□ -0.65
SCARF1-209ENST00000576012 RNF223E7ERA6 249 aa10.96□□□□□ -0.66
SCARF1-209ENST00000576012 VPREB3Q9UKI3 123 aa10.96□□□□□ -0.66
SCARF1-209ENST00000576012 FAM208BQ5VWN6 2430 aa10.96□□□□□ -0.66
SCARF1-209ENST00000576012 PMVKQ15126 192 aa10.96□□□□□ -0.66
SCARF1-209ENST00000576012 Q8N1Y9 231 aa10.96□□□□□ -0.66
SCARF1-209ENST00000576012 ZFAND2AQ8N6M9 145 aa10.96□□□□□ -0.66
SCARF1-209ENST00000576012 PPDPFQ9H3Y8 114 aa10.96□□□□□ -0.66
SCARF1-209ENST00000576012 MUC4Q99102 2169 aa10.95□□□□□ -0.66
SCARF1-209ENST00000576012 TRAV21A0A0B4J279 112 aa10.95□□□□□ -0.66
SCARF1-209ENST00000576012 SDHAF1A6NFY7 115 aa10.95□□□□□ -0.66
SCARF1-209ENST00000576012 EIF4EBP3O60516 100 aaPredicted RBP10.95□□□□□ -0.66
SCARF1-209ENST00000576012 Q8NA96 180 aa10.95□□□□□ -0.66
SCARF1-209ENST00000576012 UTP20O75691 2785 aaKnown RBP10.95□□□□□ -0.66
SCARF1-209ENST00000576012 USP9YO00507 2555 aaPredicted RBP10.95□□□□□ -0.66
SCARF1-209ENST00000576012 FAM159AQ6UWV7 190 aa10.95□□□□□ -0.66
SCARF1-209ENST00000576012 TRAV12-3A0A0B4J271 114 aa10.94□□□□□ -0.66
SCARF1-209ENST00000576012 RBAKDNA6NC62 111 aa10.94□□□□□ -0.66
SCARF1-209ENST00000576012 NDUFV3P56181 108 aaKnown RBP10.94□□□□□ -0.66
SCARF1-209ENST00000576012 GPHB5Q86YW7 130 aa10.94□□□□□ -0.66
SCARF1-209ENST00000576012 IGHV3-73A0A0B4J1V6 119 aa10.94□□□□□ -0.66
SCARF1-209ENST00000576012 EDN2P20800 178 aa10.94□□□□□ -0.66
SCARF1-209ENST00000576012 IGFL3Q6UXB1 125 aa10.94□□□□□ -0.66
SCARF1-209ENST00000576012 C9orf47Q6ZRZ4 202 aa10.94□□□□□ -0.66
SCARF1-209ENST00000576012 C15orf53Q8NAA6 179 aa10.94□□□□□ -0.66
SCARF1-209ENST00000576012 A8MZ25 164 aa10.94□□□□□ -0.66
SCARF1-209ENST00000576012 ZNF56Q15929 161 aa10.94□□□□□ -0.66
SCARF1-209ENST00000576012 SLC25A29Q8N8R3 303 aa10.94□□□□□ -0.66
SCARF1-209ENST00000576012 TRAV12-2A0A075B6T6 113 aa10.93□□□□□ -0.66
SCARF1-209ENST00000576012 A0A0U1RRA0 63 aa10.93□□□□□ -0.66
SCARF1-209ENST00000576012 CDSNQ15517 529 aa10.93□□□□□ -0.66
SCARF1-209ENST00000576012 SUMO4Q6EEV6 95 aa10.93□□□□□ -0.66
SCARF1-209ENST00000576012 EEF1AKMT3Q96AZ1 226 aa10.93□□□□□ -0.66
SCARF1-209ENST00000576012 DUX3Q96PT4 197 aa10.93□□□□□ -0.66
SCARF1-209ENST00000576012 MYO18BQ8IUG5 2567 aa10.93□□□□□ -0.66
SCARF1-209ENST00000576012 A0A0J9YXV3 536 aa10.93□□□□□ -0.66
SCARF1-209ENST00000576012 RNASE3P12724 160 aaKnown RBP10.93□□□□□ -0.66
SCARF1-209ENST00000576012 TMEM262E9PQX1 116 aa10.92□□□□□ -0.66
SCARF1-209ENST00000576012 CEMP1Q6PRD7 247 aaPredicted RBP10.92□□□□□ -0.66
SCARF1-209ENST00000576012 SAA4P35542 130 aa10.92□□□□□ -0.66
SCARF1-209ENST00000576012 LY6G5BQ8NDX9 201 aa10.92□□□□□ -0.66
SCARF1-209ENST00000576012 TRAV8-4A0A0B4J246 113 aa10.92□□□□□ -0.66
SCARF1-209ENST00000576012 IGHV3-33P01772 117 aa10.92□□□□□ -0.66
SCARF1-209ENST00000576012 DAND5Q8N907 189 aa10.92□□□□□ -0.66
SCARF1-209ENST00000576012 FAM110DQ8TAY7 271 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms