RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 PGLYRP4Q96LB8 373 aa6.01□□□□□ -1.45
NUP88-211ENST00000575976 GFRA4Q9GZZ7 299 aa6.01□□□□□ -1.45
NUP88-211ENST00000575976 MSRB1Q9NZV6 116 aa6.01□□□□□ -1.45
NUP88-211ENST00000575976 CARHSP1Q9Y2V2 147 aaKnown RBP6.01□□□□□ -1.45
NUP88-211ENST00000575976 STAB2Q8WWQ8 2551 aa6.01□□□□□ -1.45
NUP88-211ENST00000575976 RYR1P21817 5038 aa6□□□□□ -1.45
NUP88-211ENST00000575976 IGHV4-4A0A075B6R2 117 aa6□□□□□ -1.45
NUP88-211ENST00000575976 TRAV26-1A0A087WT03 109 aa6□□□□□ -1.45
NUP88-211ENST00000575976 A0A087WWL8 130 aa6□□□□□ -1.45
NUP88-211ENST00000575976 TRGV4A0A0C4DH28 118 aa6□□□□□ -1.45
NUP88-211ENST00000575976 A0A0J9YY99 117 aa6□□□□□ -1.45
NUP88-211ENST00000575976 SMIM27A0A1W2PRY6 76 aa6□□□□□ -1.45
NUP88-211ENST00000575976 FAM231BA6NCW3 169 aa6□□□□□ -1.45
NUP88-211ENST00000575976 HIGD1CA8MV81 97 aa6□□□□□ -1.45
NUP88-211ENST00000575976 PPP1R2P9O14990 202 aa6□□□□□ -1.45
NUP88-211ENST00000575976 CRYGDP07320 174 aa6□□□□□ -1.45
NUP88-211ENST00000575976 NTF3P20783 257 aa6□□□□□ -1.45
NUP88-211ENST00000575976 CRYBA4P53673 196 aa6□□□□□ -1.45
NUP88-211ENST00000575976 WDR73Q6P4I2 378 aa6□□□□□ -1.45
NUP88-211ENST00000575976 HHLA3Q9XRX5 114 aa6□□□□□ -1.45
NUP88-211ENST00000575976 CIDEAO60543 219 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 MT-ND4LP03901 98 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 GATA1P15976 413 aaPredicted RBP5.99□□□□□ -1.45
NUP88-211ENST00000575976 SLAQ13239 276 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 FAM74A4Q5TZK3 123 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 UFSP1Q6NVU6 142 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 ZFP2Q6ZN57 461 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 Q6ZSN1 163 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 C14orf178Q8N769 122 aaPredicted RBP5.99□□□□□ -1.45
NUP88-211ENST00000575976 NUP35Q8NFH5 326 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 VSIG2Q96IQ7 327 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 FAM210BQ96KR6 192 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 CNFNQ9BYD5 112 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 PRO0255Q9UI72 69 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 APLNQ9ULZ1 77 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 KIF25-AS1Q9Y6Z4 181 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 HERC2O95714 4834 aa5.99□□□□□ -1.45
NUP88-211ENST00000575976 RHODO00212 210 aa5.98□□□□□ -1.45
NUP88-211ENST00000575976 PAX4O43316 350 aa5.98□□□□□ -1.45
NUP88-211ENST00000575976 APOC3P02656 99 aa5.98□□□□□ -1.45
NUP88-211ENST00000575976 TWIST1Q15672 202 aa5.98□□□□□ -1.45
NUP88-211ENST00000575976 NDUFA5Q16718 116 aa5.98□□□□□ -1.45
NUP88-211ENST00000575976 BORCS7Q96B45 105 aa5.98□□□□□ -1.45
NUP88-211ENST00000575976 AP1S3Q96PC3 154 aa5.98□□□□□ -1.45
NUP88-211ENST00000575976 NAT8BQ9UHF3 227 aa5.98□□□□□ -1.45
NUP88-211ENST00000575976 LOC100131303A0A0U1RQF7 123 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 A0A1B0GUT8 65 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 TRBV6-4A0A1B0GX49 114 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 C7orf77A4D0Y5 90 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 H3BNG1 76 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 NUDT3O95989 172 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 TRGC1P0CF51 173 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 EVI2AP22794 236 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 TCTAP57738 103 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 LINC00315P59091 139 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 SLC25A29Q8N8R3 303 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 C15orf53Q8NAA6 179 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 CLRN3Q8NCR9 226 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 LYSTQ99698 3801 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 CTDSP1Q9GZU7 261 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 NACAE9PAV3 2078 aa5.97□□□□□ -1.45
NUP88-211ENST00000575976 CSMD3Q7Z407 3707 aa5.96□□□□□ -1.45
NUP88-211ENST00000575976 A0A096LPF7 62 aa5.96□□□□□ -1.46
NUP88-211ENST00000575976 MGPP08493 103 aa5.96□□□□□ -1.46
NUP88-211ENST00000575976 SMIM17P0DL12 118 aa5.96□□□□□ -1.46
NUP88-211ENST00000575976 GYPEP15421 78 aa5.96□□□□□ -1.46
NUP88-211ENST00000575976 FAM3BP58499 235 aaPredicted RBP5.96□□□□□ -1.46
NUP88-211ENST00000575976 RIGQ13278 110 aa5.96□□□□□ -1.46
NUP88-211ENST00000575976 RHOHQ15669 191 aa5.96□□□□□ -1.46
NUP88-211ENST00000575976 ZNF56Q15929 161 aa5.96□□□□□ -1.46
NUP88-211ENST00000575976 DPH3P1Q9H4G8 78 aa5.96□□□□□ -1.46
NUP88-211ENST00000575976 RPS10P5Q9NQ39 176 aa5.96□□□□□ -1.46
NUP88-211ENST00000575976 Q9UF83 564 aa5.96□□□□□ -1.46
NUP88-211ENST00000575976 F5H697 171 aa5.95□□□□□ -1.46
NUP88-211ENST00000575976 K7EQD1 137 aa5.95□□□□□ -1.46
NUP88-211ENST00000575976 P0DMU3 169 aa5.95□□□□□ -1.46
NUP88-211ENST00000575976 FAM231AP0DMU4 169 aa5.95□□□□□ -1.46
NUP88-211ENST00000575976 FAM231CP0DMU5 169 aa5.95□□□□□ -1.46
NUP88-211ENST00000575976 BTF3P20290 206 aaKnown RBP5.95□□□□□ -1.46
NUP88-211ENST00000575976 RAB4BP61018 213 aa5.95□□□□□ -1.46
NUP88-211ENST00000575976 RHEBQ15382 184 aa5.95□□□□□ -1.46
NUP88-211ENST00000575976 MRPL54Q6P161 138 aaKnown RBP5.95□□□□□ -1.46
NUP88-211ENST00000575976 SMIM15Q7Z3B0 74 aa5.95□□□□□ -1.46
NUP88-211ENST00000575976 SVBPQ8N300 66 aa5.95□□□□□ -1.46
NUP88-211ENST00000575976 PRADC1Q9BSG0 188 aa5.95□□□□□ -1.46
NUP88-211ENST00000575976 ICOSQ9Y6W8 199 aa5.95□□□□□ -1.46
NUP88-211ENST00000575976 STARD9Q9P2P6 4700 aa5.94□□□□□ -1.46
NUP88-211ENST00000575976 A0A087WWC5 75 aa5.94□□□□□ -1.46
NUP88-211ENST00000575976 A0A1B0GXF2 115 aa5.94□□□□□ -1.46
NUP88-211ENST00000575976 GAGE12JA6NER3 117 aa5.94□□□□□ -1.46
NUP88-211ENST00000575976 SNAPINO95295 136 aa5.94□□□□□ -1.46
NUP88-211ENST00000575976 CAMPP49913 170 aa5.94□□□□□ -1.46
NUP88-211ENST00000575976 GAGE1Q13065 139 aa5.94□□□□□ -1.46
NUP88-211ENST00000575976 GAGE4Q13068 117 aa5.94□□□□□ -1.46
NUP88-211ENST00000575976 GAGE5Q13069 117 aa5.94□□□□□ -1.46
NUP88-211ENST00000575976 MRPL23Q16540 153 aaKnown RBP5.94□□□□□ -1.46
NUP88-211ENST00000575976 GAGE13Q4V321 117 aa5.94□□□□□ -1.46
NUP88-211ENST00000575976 SUMO4Q6EEV6 95 aa5.94□□□□□ -1.46
NUP88-211ENST00000575976 IMMP2LQ96T52 175 aa5.94□□□□□ -1.46
NUP88-211ENST00000575976 TMEM191AQ9H0A3 160 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms