RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CRYBA4P53673 196 aa9.79□□□□□ -0.84
RPAIN-217ENST00000575711 FOXA3P55318 350 aaPredicted RBP9.79□□□□□ -0.84
RPAIN-217ENST00000575711 PGLYRP4Q96LB8 373 aa9.79□□□□□ -0.84
RPAIN-217ENST00000575711 AP1S3Q96PC3 154 aa9.79□□□□□ -0.84
RPAIN-217ENST00000575711 SAMD10Q9BYL1 202 aa9.79□□□□□ -0.84
RPAIN-217ENST00000575711 CSMD3Q7Z407 3707 aa9.79□□□□□ -0.84
RPAIN-217ENST00000575711 NUDT3O95989 172 aa9.78□□□□□ -0.84
RPAIN-217ENST00000575711 MT-ND4LP03901 98 aa9.78□□□□□ -0.84
RPAIN-217ENST00000575711 CRYGDP07320 174 aa9.78□□□□□ -0.84
RPAIN-217ENST00000575711 SMIM17P0DL12 118 aa9.78□□□□□ -0.84
RPAIN-217ENST00000575711 GATA1P15976 413 aaPredicted RBP9.78□□□□□ -0.84
RPAIN-217ENST00000575711 NTF3P20783 257 aa9.78□□□□□ -0.84
RPAIN-217ENST00000575711 TWIST1Q15672 202 aa9.78□□□□□ -0.84
RPAIN-217ENST00000575711 VSIG2Q96IQ7 327 aa9.78□□□□□ -0.84
RPAIN-217ENST00000575711 CNFNQ9BYD5 112 aa9.78□□□□□ -0.84
RPAIN-217ENST00000575711 TRGC1P0CF51 173 aa9.77□□□□□ -0.85
RPAIN-217ENST00000575711 RNF212Q495C1 297 aa9.77□□□□□ -0.85
RPAIN-217ENST00000575711 UFSP1Q6NVU6 142 aa9.77□□□□□ -0.85
RPAIN-217ENST00000575711 ANAPC16Q96DE5 110 aa9.77□□□□□ -0.85
RPAIN-217ENST00000575711 PRADC1Q9BSG0 188 aa9.77□□□□□ -0.85
RPAIN-217ENST00000575711 MSRB1Q9NZV6 116 aa9.77□□□□□ -0.85
RPAIN-217ENST00000575711 NAT8BQ9UHF3 227 aa9.77□□□□□ -0.85
RPAIN-217ENST00000575711 TRBV6-4A0A1B0GX49 114 aa9.76□□□□□ -0.85
RPAIN-217ENST00000575711 SMIM27A0A1W2PRY6 76 aa9.76□□□□□ -0.85
RPAIN-217ENST00000575711 RHOHQ15669 191 aa9.76□□□□□ -0.85
RPAIN-217ENST00000575711 C14orf178Q8N769 122 aaPredicted RBP9.76□□□□□ -0.85
RPAIN-217ENST00000575711 SLC25A29Q8N8R3 303 aa9.76□□□□□ -0.85
RPAIN-217ENST00000575711 CARHSP1Q9Y2V2 147 aaKnown RBP9.76□□□□□ -0.85
RPAIN-217ENST00000575711 ICOSQ9Y6W8 199 aa9.76□□□□□ -0.85
RPAIN-217ENST00000575711 A0A1B0GUT8 65 aa9.75□□□□□ -0.85
RPAIN-217ENST00000575711 GYPEP15421 78 aa9.75□□□□□ -0.85
RPAIN-217ENST00000575711 ZNF56Q15929 161 aa9.75□□□□□ -0.85
RPAIN-217ENST00000575711 C10orf91Q5T1B1 145 aa9.75□□□□□ -0.85
RPAIN-217ENST00000575711 SMIM15Q7Z3B0 74 aa9.75□□□□□ -0.85
RPAIN-217ENST00000575711 NUP35Q8NFH5 326 aa9.75□□□□□ -0.85
RPAIN-217ENST00000575711 A0A096LPF7 62 aa9.74□□□□□ -0.85
RPAIN-217ENST00000575711 F5H697 171 aa9.74□□□□□ -0.85
RPAIN-217ENST00000575711 K7EQD1 137 aa9.74□□□□□ -0.85
RPAIN-217ENST00000575711 P0DMU3 169 aa9.74□□□□□ -0.85
RPAIN-217ENST00000575711 FAM231AP0DMU4 169 aa9.74□□□□□ -0.85
RPAIN-217ENST00000575711 FAM231CP0DMU5 169 aa9.74□□□□□ -0.85
RPAIN-217ENST00000575711 EVI2AP22794 236 aa9.74□□□□□ -0.85
RPAIN-217ENST00000575711 RAB4BP61018 213 aa9.74□□□□□ -0.85
RPAIN-217ENST00000575711 RIGQ13278 110 aa9.74□□□□□ -0.85
RPAIN-217ENST00000575711 MRPL23Q16540 153 aaKnown RBP9.74□□□□□ -0.85
RPAIN-217ENST00000575711 NDUFA5Q16718 116 aa9.74□□□□□ -0.85
RPAIN-217ENST00000575711 Q6ZSN1 163 aa9.74□□□□□ -0.85
RPAIN-217ENST00000575711 DPH3P1Q9H4G8 78 aa9.74□□□□□ -0.85
RPAIN-217ENST00000575711 KIF25-AS1Q9Y6Z4 181 aa9.74□□□□□ -0.85
RPAIN-217ENST00000575711 PLECQ15149 4684 aaKnown RBP9.74□□□□□ -0.85
RPAIN-217ENST00000575711 MGPP08493 103 aa9.73□□□□□ -0.85
RPAIN-217ENST00000575711 SRIP30626 198 aa9.73□□□□□ -0.85
RPAIN-217ENST00000575711 LOC100131303A0A0U1RQF7 123 aa9.72□□□□□ -0.85
RPAIN-217ENST00000575711 LY6G6CO95867 125 aa9.72□□□□□ -0.85
RPAIN-217ENST00000575711 LGALS9CQ6DKI2 356 aa9.72□□□□□ -0.85
RPAIN-217ENST00000575711 LINC00476Q8WZB0 136 aa9.72□□□□□ -0.85
RPAIN-217ENST00000575711 CTDSP1Q9GZU7 261 aa9.72□□□□□ -0.85
RPAIN-217ENST00000575711 NACAE9PAV3 2078 aa9.71□□□□□ -0.85
RPAIN-217ENST00000575711 APOC3P02656 99 aa9.71□□□□□ -0.86
RPAIN-217ENST00000575711 CCL18P55774 89 aa9.71□□□□□ -0.86
RPAIN-217ENST00000575711 LINC00315P59091 139 aa9.71□□□□□ -0.86
RPAIN-217ENST00000575711 NEGR1Q7Z3B1 354 aa9.71□□□□□ -0.86
RPAIN-217ENST00000575711 SH2D6Q7Z4S9 175 aa9.71□□□□□ -0.86
RPAIN-217ENST00000575711 UBE2DNLQ8IWF7 75 aa9.71□□□□□ -0.86
RPAIN-217ENST00000575711 SLC7A5P1Q8MH63 180 aa9.71□□□□□ -0.86
RPAIN-217ENST00000575711 TRBV10-1A0A0K0K1A3 114 aa9.7□□□□□ -0.86
RPAIN-217ENST00000575711 LCE6AA0A183 80 aa9.7□□□□□ -0.86
RPAIN-217ENST00000575711 RHEBQ15382 184 aa9.7□□□□□ -0.86
RPAIN-217ENST00000575711 CLRN3Q8NCR9 226 aa9.7□□□□□ -0.86
RPAIN-217ENST00000575711 A0A1B0GW15 77 aa9.69□□□□□ -0.86
RPAIN-217ENST00000575711 C7orf77A4D0Y5 90 aa9.69□□□□□ -0.86
RPAIN-217ENST00000575711 GAGE12JA6NER3 117 aa9.69□□□□□ -0.86
RPAIN-217ENST00000575711 H7C1H1 209 aa9.69□□□□□ -0.86
RPAIN-217ENST00000575711 FAM3BP58499 235 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-217ENST00000575711 GAGE1Q13065 139 aa9.69□□□□□ -0.86
RPAIN-217ENST00000575711 GAGE4Q13068 117 aa9.69□□□□□ -0.86
RPAIN-217ENST00000575711 GAGE5Q13069 117 aa9.69□□□□□ -0.86
RPAIN-217ENST00000575711 GAGE13Q4V321 117 aa9.69□□□□□ -0.86
RPAIN-217ENST00000575711 SUMO4Q6EEV6 95 aa9.69□□□□□ -0.86
RPAIN-217ENST00000575711 MRPL54Q6P161 138 aaKnown RBP9.69□□□□□ -0.86
RPAIN-217ENST00000575711 SVBPQ8N300 66 aa9.69□□□□□ -0.86
RPAIN-217ENST00000575711 IMMP2LQ96T52 175 aa9.69□□□□□ -0.86
RPAIN-217ENST00000575711 TMEM191AQ9H0A3 160 aa9.69□□□□□ -0.86
RPAIN-217ENST00000575711 SNAPINO95295 136 aa9.68□□□□□ -0.86
RPAIN-217ENST00000575711 S100A8P05109 93 aa9.68□□□□□ -0.86
RPAIN-217ENST00000575711 RPL36AP83881 106 aaKnown RBP9.68□□□□□ -0.86
RPAIN-217ENST00000575711 ESRGQ1W209 222 aa9.68□□□□□ -0.86
RPAIN-217ENST00000575711 KCNIP4Q6PIL6 250 aa9.68□□□□□ -0.86
RPAIN-217ENST00000575711 ATP5L2Q7Z4Y8 100 aa9.68□□□□□ -0.86
RPAIN-217ENST00000575711 RPL36ALQ969Q0 106 aaKnown RBP9.68□□□□□ -0.86
RPAIN-217ENST00000575711 RPS10P5Q9NQ39 176 aa9.68□□□□□ -0.86
RPAIN-217ENST00000575711 TMEM242Q9NWH2 141 aa9.68□□□□□ -0.86
RPAIN-217ENST00000575711 A0A087WWC5 75 aa9.67□□□□□ -0.86
RPAIN-217ENST00000575711 CAMPP49913 170 aa9.67□□□□□ -0.86
RPAIN-217ENST00000575711 HBBP68871 147 aa9.67□□□□□ -0.86
RPAIN-217ENST00000575711 ATP6V0E2Q8NHE4 81 aa9.67□□□□□ -0.86
RPAIN-217ENST00000575711 ZNRF2Q8NHG8 242 aa9.67□□□□□ -0.86
RPAIN-217ENST00000575711 Q9UF83 564 aa9.67□□□□□ -0.86
RPAIN-217ENST00000575711 ALMS1Q8TCU4 4167 aa9.66□□□□□ -0.86
RPAIN-217ENST00000575711 TENM2Q9NT68 2774 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms