RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 IGKV2D-24A0A075B6R9 120 aa14.37□□□□□ -0.11
SNF8-216ENST00000573795 M0R036 132 aa14.37□□□□□ -0.11
SNF8-216ENST00000573795 IFNA7P01567 189 aa14.37□□□□□ -0.11
SNF8-216ENST00000573795 RPL7L1Q6DKI1 246 aaKnown RBP14.37□□□□□ -0.11
SNF8-216ENST00000573795 COX8CQ7Z4L0 72 aa14.37□□□□□ -0.11
SNF8-216ENST00000573795 KLK12Q9UKR0 248 aa14.37□□□□□ -0.11
SNF8-216ENST00000573795 A0A087WWL8 130 aa14.36□□□□□ -0.11
SNF8-216ENST00000573795 GRIFINA4D1Z8 144 aa14.36□□□□□ -0.11
SNF8-216ENST00000573795 RBFOX3A6NFN3 312 aa14.36□□□□□ -0.11
SNF8-216ENST00000573795 FAM74A7A6NL05 159 aa14.36□□□□□ -0.11
SNF8-216ENST00000573795 SH2D1AO60880 128 aa14.36□□□□□ -0.11
SNF8-216ENST00000573795 FAM74A4Q5TZK3 123 aa14.36□□□□□ -0.11
SNF8-216ENST00000573795 Q8N976 141 aa14.36□□□□□ -0.11
SNF8-216ENST00000573795 RMI2Q96E14 147 aa14.36□□□□□ -0.11
SNF8-216ENST00000573795 SFRP2Q96HF1 295 aa14.36□□□□□ -0.11
SNF8-216ENST00000573795 CHAC1Q9BUX1 264 aa14.36□□□□□ -0.11
SNF8-216ENST00000573795 CTXND1A0A1B0GTU2 59 aa14.35□□□□□ -0.11
SNF8-216ENST00000573795 ATRAIDQ6UW56 229 aa14.35□□□□□ -0.11
SNF8-216ENST00000573795 SYT8Q8NBV8 401 aa14.35□□□□□ -0.11
SNF8-216ENST00000573795 OR11H4Q8NGC9 324 aa14.35□□□□□ -0.11
SNF8-216ENST00000573795 URGCP-MRPS24S4R325 110 aa14.35□□□□□ -0.11
SNF8-216ENST00000573795 CIRBP-AS1Q8TBR5 109 aa14.34□□□□□ -0.11
SNF8-216ENST00000573795 UBE2WQ96B02 151 aa14.34□□□□□ -0.11
SNF8-216ENST00000573795 HIST1H2BAQ96A08 127 aa14.33□□□□□ -0.12
SNF8-216ENST00000573795 CHCHD7Q9BUK0 85 aa14.33□□□□□ -0.12
SNF8-216ENST00000573795 UBE2D3P61077 147 aa14.32□□□□□ -0.12
SNF8-216ENST00000573795 UBE2D2P62837 147 aa14.32□□□□□ -0.12
SNF8-216ENST00000573795 MED28Q9H204 178 aa14.32□□□□□ -0.12
SNF8-216ENST00000573795 M0R381 172 aa14.31□□□□□ -0.12
SNF8-216ENST00000573795 SEC11BP0C7V7 166 aa14.31□□□□□ -0.12
SNF8-216ENST00000573795 ZNF674Q2M3X9 581 aa14.31□□□□□ -0.12
SNF8-216ENST00000573795 LINC01559Q495D7 138 aa14.31□□□□□ -0.12
SNF8-216ENST00000573795 FAM162BQ5T6X4 162 aa14.31□□□□□ -0.12
SNF8-216ENST00000573795 ZFP30Q9Y2G7 519 aa14.31□□□□□ -0.12
SNF8-216ENST00000573795 PHLDA3Q9Y5J5 127 aa14.31□□□□□ -0.12
SNF8-216ENST00000573795 A0A087WX48 190 aa14.3□□□□□ -0.12
SNF8-216ENST00000573795 TMSB15BA0A087X1C1 80 aa14.3□□□□□ -0.12
SNF8-216ENST00000573795 TRBV10-1A0A0K0K1A3 114 aa14.3□□□□□ -0.12
SNF8-216ENST00000573795 NKX6-2Q9C056 277 aaPredicted RBP14.3□□□□□ -0.12
SNF8-216ENST00000573795 GIPP09681 153 aaPredicted RBP14.29□□□□□ -0.12
SNF8-216ENST00000573795 TPT1P13693 172 aaKnown RBP14.29□□□□□ -0.12
SNF8-216ENST00000573795 FMC1Q96HJ9 113 aa14.29□□□□□ -0.12
SNF8-216ENST00000573795 BORCS7-ASMTA0A0B4J1R7 106 aa14.28□□□□□ -0.12
SNF8-216ENST00000573795 TRBV6-1A0A0K0K1D8 114 aa14.28□□□□□ -0.12
SNF8-216ENST00000573795 ELOBQ15370 118 aa14.28□□□□□ -0.12
SNF8-216ENST00000573795 ENHOQ6UWT2 76 aa14.28□□□□□ -0.12
SNF8-216ENST00000573795 ZFP82Q8N141 532 aa14.28□□□□□ -0.12
SNF8-216ENST00000573795 INO80EQ8NBZ0 244 aaPredicted RBP14.28□□□□□ -0.12
SNF8-216ENST00000573795 OR10G8Q8NGN5 311 aa14.28□□□□□ -0.12
SNF8-216ENST00000573795 TRBV7-3A0A075B6L6 115 aa14.27□□□□□ -0.13
SNF8-216ENST00000573795 LTAP01374 205 aa14.27□□□□□ -0.13
SNF8-216ENST00000573795 RPL36AP83881 106 aaKnown RBP14.27□□□□□ -0.13
SNF8-216ENST00000573795 RPL36ALQ969Q0 106 aaKnown RBP14.27□□□□□ -0.13
SNF8-216ENST00000573795 FXYD6-FXYD2A0A087WZ82 144 aa14.26□□□□□ -0.13
SNF8-216ENST00000573795 PTTG1O95997 202 aa14.26□□□□□ -0.13
SNF8-216ENST00000573795 IGLV2-8P01709 118 aa14.26□□□□□ -0.13
SNF8-216ENST00000573795 MAP1LC3B2A6NCE7 125 aa14.25□□□□□ -0.13
SNF8-216ENST00000573795 G3V3Q6 166 aa14.25□□□□□ -0.13
SNF8-216ENST00000573795 UBE2G1P62253 170 aa14.25□□□□□ -0.13
SNF8-216ENST00000573795 Q0VG73 95 aa14.25□□□□□ -0.13
SNF8-216ENST00000573795 MPV17L2Q567V2 206 aa14.25□□□□□ -0.13
SNF8-216ENST00000573795 AKR1C8PQ5T2L2 129 aa14.25□□□□□ -0.13
SNF8-216ENST00000573795 MAP1LC3BQ9GZQ8 125 aa14.25□□□□□ -0.13
SNF8-216ENST00000573795 TRBV6-8A0A0A6YYG3 113 aa14.24□□□□□ -0.13
SNF8-216ENST00000573795 OXTP01178 125 aa14.24□□□□□ -0.13
SNF8-216ENST00000573795 PRR27Q6MZM9 219 aa14.24□□□□□ -0.13
SNF8-216ENST00000573795 NEXN-AS1Q8NBZ9 246 aa14.24□□□□□ -0.13
SNF8-216ENST00000573795 C1orf43Q9BWL3 253 aa14.24□□□□□ -0.13
SNF8-216ENST00000573795 SERTAD4-AS1Q5TG53 156 aa14.23□□□□□ -0.13
SNF8-216ENST00000573795 KCNIP4Q6PIL6 250 aa14.23□□□□□ -0.13
SNF8-216ENST00000573795 CYTL1Q9NRR1 136 aa14.23□□□□□ -0.13
SNF8-216ENST00000573795 TMEM262E9PQX1 116 aa14.22□□□□□ -0.13
SNF8-216ENST00000573795 FHITP49789 147 aa14.22□□□□□ -0.13
SNF8-216ENST00000573795 RPL19P84098 196 aaKnown RBP14.22□□□□□ -0.13
SNF8-216ENST00000573795 C14orf177Q52M58 125 aa14.22□□□□□ -0.13
SNF8-216ENST00000573795 C15orf54Q8N8G6 183 aa14.22□□□□□ -0.13
SNF8-216ENST00000573795 OR10AG1Q8NH19 301 aa14.22□□□□□ -0.13
SNF8-216ENST00000573795 TCEAL7Q9BRU2 100 aa14.22□□□□□ -0.13
SNF8-216ENST00000573795 RAB4BP61018 213 aa14.21□□□□□ -0.13
SNF8-216ENST00000573795 USP17L23D6RBM5 183 aa14.2□□□□□ -0.14
SNF8-216ENST00000573795 AKR1C3P42330 323 aa14.2□□□□□ -0.14
SNF8-216ENST00000573795 HNRNPA3P51991 378 aaKnown RBP14.2□□□□□ -0.14
SNF8-216ENST00000573795 CST9LP1Q5W188 147 aa14.2□□□□□ -0.14
SNF8-216ENST00000573795 CRPP02741 224 aa14.19□□□□□ -0.14
SNF8-216ENST00000573795 ZNF56Q15929 161 aa14.19□□□□□ -0.14
SNF8-216ENST00000573795 NTM-AS1Q6ZSK4 140 aa14.19□□□□□ -0.14
SNF8-216ENST00000573795 ANGP03950 147 aaKnown RBP14.18□□□□□ -0.14
SNF8-216ENST00000573795 PRSS1P07477 247 aa14.18□□□□□ -0.14
SNF8-216ENST00000573795 CXCL1P09341 107 aa14.18□□□□□ -0.14
SNF8-216ENST00000573795 KRTAP26-1Q6PEX3 210 aa14.18□□□□□ -0.14
SNF8-216ENST00000573795 SNAI2O43623 268 aa14.17□□□□□ -0.14
SNF8-216ENST00000573795 PAGE4O60829 102 aa14.17□□□□□ -0.14
SNF8-216ENST00000573795 HLA-DQA1P01909 254 aa14.17□□□□□ -0.14
SNF8-216ENST00000573795 MLST8Q9BVC4 326 aa14.17□□□□□ -0.14
SNF8-216ENST00000573795 SSBP4Q9BWG4 385 aaPredicted RBP14.17□□□□□ -0.14
SNF8-216ENST00000573795 RPL37AP61513 92 aaKnown RBP14.16□□□□□ -0.14
SNF8-216ENST00000573795 STOML3Q8TAV4 291 aa14.16□□□□□ -0.14
SNF8-216ENST00000573795 DAZAP1Q96EP5 407 aaKnown RBP14.16□□□□□ -0.14
SNF8-216ENST00000573795 CHCHD5Q9BSY4 110 aa14.16□□□□□ -0.14
SNF8-216ENST00000573795 PRR34Q9NV39 138 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms