RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 PHLDA3Q9Y5J5 127 aa11.66□□□□□ -0.54
SMG6-212ENST00000573153 IGHV3-38A0A0C4DH36 116 aa11.65□□□□□ -0.54
SMG6-212ENST00000573153 RPL35P42766 123 aaKnown RBP11.65□□□□□ -0.54
SMG6-212ENST00000573153 ZFP82Q8N141 532 aa11.65□□□□□ -0.54
SMG6-212ENST00000573153 ATP6V0E2Q8NHE4 81 aa11.65□□□□□ -0.54
SMG6-212ENST00000573153 GNG13Q9P2W3 67 aa11.65□□□□□ -0.54
SMG6-212ENST00000573153 TRAV8-6A0A0B4J262 113 aa11.64□□□□□ -0.55
SMG6-212ENST00000573153 CRYGDP07320 174 aa11.64□□□□□ -0.55
SMG6-212ENST00000573153 SSBP4Q9BWG4 385 aaPredicted RBP11.64□□□□□ -0.55
SMG6-212ENST00000573153 A0A087WTM6 91 aa11.63□□□□□ -0.55
SMG6-212ENST00000573153 TMSB15BA0A087X1C1 80 aa11.63□□□□□ -0.55
SMG6-212ENST00000573153 SNAI2O43623 268 aa11.63□□□□□ -0.55
SMG6-212ENST00000573153 AKAP14Q86UN6 197 aa11.63□□□□□ -0.55
SMG6-212ENST00000573153 SMIM12Q96EX1 92 aa11.63□□□□□ -0.55
SMG6-212ENST00000573153 OR5AL1P0C617 328 aa11.62□□□□□ -0.55
SMG6-212ENST00000573153 MEF2BQ02080 365 aaPredicted RBP11.62□□□□□ -0.55
SMG6-212ENST00000573153 C9orf62Q8N4C0 152 aa11.62□□□□□ -0.55
SMG6-212ENST00000573153 C14orf178Q8N769 122 aaPredicted RBP11.62□□□□□ -0.55
SMG6-212ENST00000573153 DERL1Q9BUN8 251 aa11.62□□□□□ -0.55
SMG6-212ENST00000573153 IBA57-AS1B1ANH7 110 aa11.61□□□□□ -0.55
SMG6-212ENST00000573153 M0R381 172 aa11.61□□□□□ -0.55
SMG6-212ENST00000573153 PDE6DO43924 150 aa11.61□□□□□ -0.55
SMG6-212ENST00000573153 ERVFC1-1P60608 527 aa11.61□□□□□ -0.55
SMG6-212ENST00000573153 RPL19P84098 196 aaKnown RBP11.61□□□□□ -0.55
SMG6-212ENST00000573153 OR10J3Q5JRS4 329 aa11.61□□□□□ -0.55
SMG6-212ENST00000573153 Q8N3U1 123 aa11.61□□□□□ -0.55
SMG6-212ENST00000573153 TRBV10-1A0A0K0K1A3 114 aa11.6□□□□□ -0.55
SMG6-212ENST00000573153 LRCOL1A6NCL2 159 aa11.6□□□□□ -0.55
SMG6-212ENST00000573153 GAGE12JA6NER3 117 aa11.6□□□□□ -0.55
SMG6-212ENST00000573153 IFNA1P01562 189 aa11.6□□□□□ -0.55
SMG6-212ENST00000573153 IGLV2-8P01709 118 aa11.6□□□□□ -0.55
SMG6-212ENST00000573153 BCL2P10415 239 aa11.6□□□□□ -0.55
SMG6-212ENST00000573153 TAGLN2P37802 199 aaKnown RBP11.6□□□□□ -0.55
SMG6-212ENST00000573153 GAGE1Q13065 139 aa11.6□□□□□ -0.55
SMG6-212ENST00000573153 GAGE4Q13068 117 aa11.6□□□□□ -0.55
SMG6-212ENST00000573153 GAGE5Q13069 117 aa11.6□□□□□ -0.55
SMG6-212ENST00000573153 GAGE13Q4V321 117 aa11.6□□□□□ -0.55
SMG6-212ENST00000573153 VPS13BQ7Z7G8 4022 aa11.6□□□□□ -0.55
SMG6-212ENST00000573153 A0A087WWC5 75 aa11.59□□□□□ -0.55
SMG6-212ENST00000573153 A0A087WWL8 130 aa11.59□□□□□ -0.55
SMG6-212ENST00000573153 LAGE3Q14657 143 aa11.59□□□□□ -0.55
SMG6-212ENST00000573153 CENPWQ5EE01 88 aa11.59□□□□□ -0.55
SMG6-212ENST00000573153 FAM74A4Q5TZK3 123 aa11.59□□□□□ -0.55
SMG6-212ENST00000573153 CDPF1Q6NVV7 123 aa11.59□□□□□ -0.55
SMG6-212ENST00000573153 MAPKAPK5-AS1Q8N8E1 139 aa11.59□□□□□ -0.55
SMG6-212ENST00000573153 OR10AG1Q8NH19 301 aa11.59□□□□□ -0.55
SMG6-212ENST00000573153 PGPEP1Q9NXJ5 209 aa11.59□□□□□ -0.55
SMG6-212ENST00000573153 EREGO14944 169 aa11.58□□□□□ -0.56
SMG6-212ENST00000573153 PRR27Q6MZM9 219 aa11.58□□□□□ -0.56
SMG6-212ENST00000573153 Q8N1X5 172 aa11.58□□□□□ -0.56
SMG6-212ENST00000573153 VAX2Q9UIW0 290 aa11.58□□□□□ -0.56
SMG6-212ENST00000573153 C19orf71A6NCJ1 209 aa11.57□□□□□ -0.56
SMG6-212ENST00000573153 XGP55808 180 aa11.57□□□□□ -0.56
SMG6-212ENST00000573153 KRTAP10-1P60331 282 aa11.57□□□□□ -0.56
SMG6-212ENST00000573153 RAB4BP61018 213 aa11.57□□□□□ -0.56
SMG6-212ENST00000573153 OR10G8Q8NGN5 311 aa11.57□□□□□ -0.56
SMG6-212ENST00000573153 TRBV20OR9-2A0A075B6H5 130 aa11.56□□□□□ -0.56
SMG6-212ENST00000573153 GNG4P50150 75 aa11.56□□□□□ -0.56
SMG6-212ENST00000573153 RAB19A4D1S5 217 aa11.55□□□□□ -0.56
SMG6-212ENST00000573153 IGLC6P0CF74 106 aa11.55□□□□□ -0.56
SMG6-212ENST00000573153 RPS20P60866 119 aaKnown RBP11.55□□□□□ -0.56
SMG6-212ENST00000573153 UBE2D3P61077 147 aa11.55□□□□□ -0.56
SMG6-212ENST00000573153 UBE2D2P62837 147 aa11.55□□□□□ -0.56
SMG6-212ENST00000573153 hCG_2014768A0A024R1R8 64 aa11.54□□□□□ -0.56
SMG6-212ENST00000573153 TRBV7-3A0A075B6L6 115 aa11.54□□□□□ -0.56
SMG6-212ENST00000573153 RPL36AP83881 106 aaKnown RBP11.54□□□□□ -0.56
SMG6-212ENST00000573153 SPANXN1Q5VSR9 72 aa11.54□□□□□ -0.56
SMG6-212ENST00000573153 LYPD6BQ8NI32 183 aa11.54□□□□□ -0.56
SMG6-212ENST00000573153 RPL36ALQ969Q0 106 aaKnown RBP11.54□□□□□ -0.56
SMG6-212ENST00000573153 BIN3Q9NQY0 253 aa11.54□□□□□ -0.56
SMG6-212ENST00000573153 MED9Q9NWA0 146 aa11.54□□□□□ -0.56
SMG6-212ENST00000573153 KIF25-AS1Q9Y6Z4 181 aa11.54□□□□□ -0.56
SMG6-212ENST00000573153 IGHV3-30P01768 117 aa11.53□□□□□ -0.56
SMG6-212ENST00000573153 IGHV3-33P01772 117 aa11.53□□□□□ -0.56
SMG6-212ENST00000573153 IGHV3-30-3P0DP02 117 aa11.53□□□□□ -0.56
SMG6-212ENST00000573153 IGHV3-30-5P0DP03 117 aa11.53□□□□□ -0.56
SMG6-212ENST00000573153 WFDC2Q14508 124 aa11.53□□□□□ -0.56
SMG6-212ENST00000573153 DAZAP1Q96EP5 407 aaKnown RBP11.53□□□□□ -0.56
SMG6-212ENST00000573153 BLOC1S1P78537 153 aa11.52□□□□□ -0.57
SMG6-212ENST00000573153 AP1S3Q96PC3 154 aa11.52□□□□□ -0.57
SMG6-212ENST00000573153 NIT1Q86X76 327 aa11.51□□□□□ -0.57
SMG6-212ENST00000573153 FER1L6-AS1Q8NA97 138 aa11.51□□□□□ -0.57
SMG6-212ENST00000573153 NEXN-AS1Q8NBZ9 246 aa11.51□□□□□ -0.57
SMG6-212ENST00000573153 OR2D3Q8NGH3 330 aa11.51□□□□□ -0.57
SMG6-212ENST00000573153 CHCHD7Q9BUK0 85 aa11.51□□□□□ -0.57
SMG6-212ENST00000573153 TRAV8-3A0A0A6YYJ7 113 aa11.5□□□□□ -0.57
SMG6-212ENST00000573153 XKRY2A2RUG3 117 aa11.5□□□□□ -0.57
SMG6-212ENST00000573153 F2Z2F3 143 aa11.5□□□□□ -0.57
SMG6-212ENST00000573153 P01737 135 aa11.5□□□□□ -0.57
SMG6-212ENST00000573153 CACNG7P62955 275 aa11.5□□□□□ -0.57
SMG6-212ENST00000573153 ZNF56Q15929 161 aa11.5□□□□□ -0.57
SMG6-212ENST00000573153 TOR2AQ5JU69 321 aa11.5□□□□□ -0.57
SMG6-212ENST00000573153 ALKAL2Q6UX46 152 aa11.5□□□□□ -0.57
SMG6-212ENST00000573153 MUC21A0A0G2JKD1 596 aa11.49□□□□□ -0.57
SMG6-212ENST00000573153 MUC21A0A140T8X8 626 aa11.49□□□□□ -0.57
SMG6-212ENST00000573153 TMEM250H0YL14 139 aa11.49□□□□□ -0.57
SMG6-212ENST00000573153 PSCAO43653 123 aa11.49□□□□□ -0.57
SMG6-212ENST00000573153 NDUFS6O75380 124 aaKnown RBP11.49□□□□□ -0.57
SMG6-212ENST00000573153 GZMBP10144 247 aa11.49□□□□□ -0.57
SMG6-212ENST00000573153 DAZ4Q86SG3 579 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms