RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 BRI3O95415 125 aa8.09□□□□□ -1.11
CCDC40-207ENST00000572253 SFTA2Q6UW10 78 aa8.09□□□□□ -1.11
CCDC40-207ENST00000572253 CSPG4Q6UVK1 2322 aa8.09□□□□□ -1.11
CCDC40-207ENST00000572253 TRBV20-1A0A075B6N2 111 aa8.09□□□□□ -1.11
CCDC40-207ENST00000572253 A0A087WWL8 130 aa8.09□□□□□ -1.11
CCDC40-207ENST00000572253 IGHG2P01859 326 aa8.09□□□□□ -1.11
CCDC40-207ENST00000572253 POLR2KP53803 58 aaKnown RBP8.09□□□□□ -1.11
CCDC40-207ENST00000572253 FOXI1Q12951 378 aa8.09□□□□□ -1.11
CCDC40-207ENST00000572253 CFAP126Q5VTH2 177 aa8.09□□□□□ -1.11
CCDC40-207ENST00000572253 ANAPC13Q9BS18 74 aa8.09□□□□□ -1.11
CCDC40-207ENST00000572253 A0A0J9YY99 117 aa8.09□□□□□ -1.11
CCDC40-207ENST00000572253 IGIPA6NJ69 53 aa8.09□□□□□ -1.11
CCDC40-207ENST00000572253 VCX2Q9H322 139 aa8.09□□□□□ -1.11
CCDC40-207ENST00000572253 IGLV4-69A0A075B6H9 119 aa8.08□□□□□ -1.12
CCDC40-207ENST00000572253 FAM74A4Q5TZK3 123 aa8.08□□□□□ -1.12
CCDC40-207ENST00000572253 PIMREGQ9BSJ6 248 aa8.08□□□□□ -1.12
CCDC40-207ENST00000572253 KIF25-AS1Q9Y6Z4 181 aa8.08□□□□□ -1.12
CCDC40-207ENST00000572253 KLLNB2CW77 178 aa8.08□□□□□ -1.12
CCDC40-207ENST00000572253 H3BUX3 64 aa8.08□□□□□ -1.12
CCDC40-207ENST00000572253 CRYGDP07320 174 aa8.08□□□□□ -1.12
CCDC40-207ENST00000572253 SRD5A1P18405 259 aa8.08□□□□□ -1.12
CCDC40-207ENST00000572253 NDUFA11Q86Y39 141 aa8.08□□□□□ -1.12
CCDC40-207ENST00000572253 TRAV12-3A0A0B4J271 114 aa8.08□□□□□ -1.12
CCDC40-207ENST00000572253 ZNF56Q15929 161 aa8.08□□□□□ -1.12
CCDC40-207ENST00000572253 ZNF256Q9Y2P7 627 aaPredicted RBP8.08□□□□□ -1.12
CCDC40-207ENST00000572253 LAMA5O15230 3695 aa8.07□□□□□ -1.12
CCDC40-207ENST00000572253 LINC00315P59091 139 aa8.07□□□□□ -1.12
CCDC40-207ENST00000572253 RPL39P62891 51 aaKnown RBP8.07□□□□□ -1.12
CCDC40-207ENST00000572253 PPDPFLQ8WWR9 84 aa8.07□□□□□ -1.12
CCDC40-207ENST00000572253 J3QQQ9 107 aa8.07□□□□□ -1.12
CCDC40-207ENST00000572253 INSL3P51460 131 aa8.07□□□□□ -1.12
CCDC40-207ENST00000572253 A8MWV9 139 aa8.07□□□□□ -1.12
CCDC40-207ENST00000572253 TSHBP01222 138 aa8.07□□□□□ -1.12
CCDC40-207ENST00000572253 JPT2Q9H910 190 aa8.07□□□□□ -1.12
CCDC40-207ENST00000572253 TRBV6-5A0A0K0K1A5 114 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 UBE2D3P61077 147 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 UBE2D2P62837 147 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 RHOHQ15669 191 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 SLC25A29Q8N8R3 303 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 DEFB104AQ8WTQ1 72 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 TRBV27A0A0K0K1C4 114 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 K7EMT4 169 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 PRO1854Q9UHT4 67 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 A6NDX4 124 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 ZNF876PQ49A33 203 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 C10orf126Q8N4M7 172 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 WFDC12Q8WWY7 111 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 DCHS1Q96JQ0 3298 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 LRBAP50851 2863 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 MYO18BQ8IUG5 2567 aa8.06□□□□□ -1.12
CCDC40-207ENST00000572253 LGALS9O00182 355 aa8.05□□□□□ -1.12
CCDC40-207ENST00000572253 IGHV4-39P01824 125 aa8.05□□□□□ -1.12
CCDC40-207ENST00000572253 IGHV3-30P01768 117 aa8.05□□□□□ -1.12
CCDC40-207ENST00000572253 IGHV3-30-5P0DP03 117 aa8.05□□□□□ -1.12
CCDC40-207ENST00000572253 SNRPD3P62318 126 aaKnown RBP8.05□□□□□ -1.12
CCDC40-207ENST00000572253 TRPT1Q86TN4 253 aaKnown RBP8.05□□□□□ -1.12
CCDC40-207ENST00000572253 TEN1Q86WV5 123 aa8.05□□□□□ -1.12
CCDC40-207ENST00000572253 TCTEX1D4Q5JR98 221 aa8.04□□□□□ -1.12
CCDC40-207ENST00000572253 CFAP161Q6P656 301 aa8.04□□□□□ -1.12
CCDC40-207ENST00000572253 ODF3Q96PU9 254 aa8.04□□□□□ -1.12
CCDC40-207ENST00000572253 PTPN13Q12923 2485 aa8.04□□□□□ -1.12
CCDC40-207ENST00000572253 LEPROTO15243 131 aa8.04□□□□□ -1.12
CCDC40-207ENST00000572253 IGHV4-38-2P0DP08 117 aa8.04□□□□□ -1.12
CCDC40-207ENST00000572253 CFC1BP0CG36 223 aa8.04□□□□□ -1.12
CCDC40-207ENST00000572253 CFC1P0CG37 223 aa8.04□□□□□ -1.12
CCDC40-207ENST00000572253 BLCAPP62952 87 aa8.04□□□□□ -1.12
CCDC40-207ENST00000572253 TCL1BO95988 128 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 ZNF688P0C7X2 276 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 SMCPP49901 116 aaPredicted RBP8.03□□□□□ -1.12
CCDC40-207ENST00000572253 NFE4Q86UQ8 179 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 IGHV3-16A0A0C4DH30 117 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 IGHV4-61A0A0C4DH41 118 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 IGLV1-40P01703 118 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 NSUN5P1Q3KNT7 163 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 ZNRF2Q8NHG8 242 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 BSNQ9UPA5 3926 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 IGKV3-20P01619 116 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 SPINK8P0C7L1 97 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 TSPEAR-AS2P59090 65 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 Q6ZS46 218 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 MUC4Q99102 2169 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 IGHV1OR15-1A0A075B7D0 117 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 C9orf85Q96MD7 179 aa8.03□□□□□ -1.12
CCDC40-207ENST00000572253 DCANP1Q8TF63 244 aa8.02□□□□□ -1.13
CCDC40-207ENST00000572253 ERG28Q9UKR5 140 aa8.02□□□□□ -1.13
CCDC40-207ENST00000572253 HIVEP3Q5T1R4 2406 aa8.02□□□□□ -1.13
CCDC40-207ENST00000572253 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.02□□□□□ -1.13
CCDC40-207ENST00000572253 TRAV2A0A0B4J234 112 aa8.02□□□□□ -1.13
CCDC40-207ENST00000572253 TGFAP01135 160 aa8.02□□□□□ -1.13
CCDC40-207ENST00000572253 PTH2Q96A98 100 aa8.02□□□□□ -1.13
CCDC40-207ENST00000572253 TMEM262E9PQX1 116 aa8.02□□□□□ -1.13
CCDC40-207ENST00000572253 I3L3M4 83 aa8.02□□□□□ -1.13
CCDC40-207ENST00000572253 M0QY20 66 aa8.02□□□□□ -1.13
CCDC40-207ENST00000572253 SNCGO76070 127 aa8.02□□□□□ -1.13
CCDC40-207ENST00000572253 CRYBA4P53673 196 aa8.02□□□□□ -1.13
CCDC40-207ENST00000572253 TRGV11A0A075B6L2 103 aa8.01□□□□□ -1.13
CCDC40-207ENST00000572253 TMEM223A0PJW6 202 aa8.01□□□□□ -1.13
CCDC40-207ENST00000572253 TEX29Q8N6K0 151 aa8.01□□□□□ -1.13
CCDC40-207ENST00000572253 C20orf203Q8NBC4 194 aa8.01□□□□□ -1.13
CCDC40-207ENST00000572253 CCL19Q99731 98 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms