RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 PEA15Q15121 130 aa9.61□□□□□ -0.87
RPAIN-211ENST00000572174 FAM74A3Q4VXF1 159 aa9.61□□□□□ -0.87
RPAIN-211ENST00000572174 OR10AG1Q8NH19 301 aa9.61□□□□□ -0.87
RPAIN-211ENST00000572174 RPP21Q9H633 154 aaKnown RBP9.61□□□□□ -0.87
RPAIN-211ENST00000572174 KMT2AQ03164 3969 aa9.61□□□□□ -0.87
RPAIN-211ENST00000572174 TRAV8-6A0A0B4J262 113 aa9.6□□□□□ -0.87
RPAIN-211ENST00000572174 TRGC1P0CF51 173 aa9.6□□□□□ -0.87
RPAIN-211ENST00000572174 RAB4BP61018 213 aa9.6□□□□□ -0.87
RPAIN-211ENST00000572174 RAB14P61106 215 aa9.6□□□□□ -0.87
RPAIN-211ENST00000572174 UFSP1Q6NVU6 142 aa9.6□□□□□ -0.87
RPAIN-211ENST00000572174 C10orf126Q8N4M7 172 aa9.6□□□□□ -0.87
RPAIN-211ENST00000572174 ATP6V0E2Q8NHE4 81 aa9.6□□□□□ -0.87
RPAIN-211ENST00000572174 OCC1Q8TAD7 63 aa9.6□□□□□ -0.87
RPAIN-211ENST00000572174 A0A087WWC5 75 aa9.59□□□□□ -0.87
RPAIN-211ENST00000572174 ZNF727A8MUV8 499 aa9.59□□□□□ -0.87
RPAIN-211ENST00000572174 IGLC6P0CF74 106 aa9.59□□□□□ -0.87
RPAIN-211ENST00000572174 EVI2AP22794 236 aa9.59□□□□□ -0.87
RPAIN-211ENST00000572174 ZNF56Q15929 161 aa9.59□□□□□ -0.87
RPAIN-211ENST00000572174 FAM231DQ6ZW35 169 aa9.59□□□□□ -0.87
RPAIN-211ENST00000572174 C6orf223Q8N319 242 aa9.59□□□□□ -0.87
RPAIN-211ENST00000572174 TPPP3Q9BW30 176 aa9.59□□□□□ -0.87
RPAIN-211ENST00000572174 GTSF1LQ9H1H1 148 aa9.59□□□□□ -0.87
RPAIN-211ENST00000572174 JPT2Q9H910 190 aa9.59□□□□□ -0.87
RPAIN-211ENST00000572174 A0A087WWL8 130 aa9.58□□□□□ -0.88
RPAIN-211ENST00000572174 LOC100131303A0A0U1RQF7 123 aa9.58□□□□□ -0.88
RPAIN-211ENST00000572174 A8MWL6 223 aa9.58□□□□□ -0.88
RPAIN-211ENST00000572174 H7C1H1 209 aa9.58□□□□□ -0.88
RPAIN-211ENST00000572174 CRYGDP07320 174 aa9.58□□□□□ -0.88
RPAIN-211ENST00000572174 RPL36AP83881 106 aaKnown RBP9.58□□□□□ -0.88
RPAIN-211ENST00000572174 CT83Q5H943 113 aa9.58□□□□□ -0.88
RPAIN-211ENST00000572174 WDR73Q6P4I2 378 aa9.58□□□□□ -0.88
RPAIN-211ENST00000572174 ZNF575Q86XF7 245 aa9.58□□□□□ -0.88
RPAIN-211ENST00000572174 NUDT10Q8NFP7 164 aa9.58□□□□□ -0.88
RPAIN-211ENST00000572174 RPL36ALQ969Q0 106 aaKnown RBP9.58□□□□□ -0.88
RPAIN-211ENST00000572174 NUDT11Q96G61 164 aa9.58□□□□□ -0.88
RPAIN-211ENST00000572174 SAMD10Q9BYL1 202 aa9.58□□□□□ -0.88
RPAIN-211ENST00000572174 VPS13DQ5THJ4 4388 aa9.58□□□□□ -0.88
RPAIN-211ENST00000572174 GATCO43716 136 aaKnown RBP9.57□□□□□ -0.88
RPAIN-211ENST00000572174 SRP19P09132 144 aaKnown RBP9.57□□□□□ -0.88
RPAIN-211ENST00000572174 CTRLP40313 264 aa9.57□□□□□ -0.88
RPAIN-211ENST00000572174 ERVFC1-1P60608 527 aa9.57□□□□□ -0.88
RPAIN-211ENST00000572174 OR10J3Q5JRS4 329 aa9.57□□□□□ -0.88
RPAIN-211ENST00000572174 LELP1Q5T871 98 aa9.57□□□□□ -0.88
RPAIN-211ENST00000572174 C15orf54Q8N8G6 183 aa9.57□□□□□ -0.88
RPAIN-211ENST00000572174 PRSS29PA6NIE9 313 aa9.56□□□□□ -0.88
RPAIN-211ENST00000572174 F5H697 171 aa9.56□□□□□ -0.88
RPAIN-211ENST00000572174 K7EN84 100 aa9.56□□□□□ -0.88
RPAIN-211ENST00000572174 DNAH10OSP0CZ25 163 aa9.56□□□□□ -0.88
RPAIN-211ENST00000572174 SMIM15Q7Z3B0 74 aa9.56□□□□□ -0.88
RPAIN-211ENST00000572174 NFE4Q86UQ8 179 aa9.56□□□□□ -0.88
RPAIN-211ENST00000572174 BORCS7Q96B45 105 aa9.56□□□□□ -0.88
RPAIN-211ENST00000572174 RNASE7Q9H1E1 156 aaKnown RBP9.56□□□□□ -0.88
RPAIN-211ENST00000572174 DNAH6Q9C0G6 4158 aa9.56□□□□□ -0.88
RPAIN-211ENST00000572174 TRBV7-3A0A075B6L6 115 aa9.55□□□□□ -0.88
RPAIN-211ENST00000572174 IGHV3-38A0A0C4DH36 116 aa9.55□□□□□ -0.88
RPAIN-211ENST00000572174 GAGE12JA6NER3 117 aa9.55□□□□□ -0.88
RPAIN-211ENST00000572174 LINC00694P0DN24 101 aa9.55□□□□□ -0.88
RPAIN-211ENST00000572174 GZMBP10144 247 aa9.55□□□□□ -0.88
RPAIN-211ENST00000572174 GAGE1Q13065 139 aa9.55□□□□□ -0.88
RPAIN-211ENST00000572174 GAGE4Q13068 117 aa9.55□□□□□ -0.88
RPAIN-211ENST00000572174 GAGE5Q13069 117 aa9.55□□□□□ -0.88
RPAIN-211ENST00000572174 GAGE13Q4V321 117 aa9.55□□□□□ -0.88
RPAIN-211ENST00000572174 LINC01551Q86U37 167 aa9.55□□□□□ -0.88
RPAIN-211ENST00000572174 CNFNQ9BYD5 112 aa9.55□□□□□ -0.88
RPAIN-211ENST00000572174 FAM231BA6NCW3 169 aa9.54□□□□□ -0.88
RPAIN-211ENST00000572174 RTL8CO15255 209 aa9.54□□□□□ -0.88
RPAIN-211ENST00000572174 TMEM241Q24JQ0 296 aa9.54□□□□□ -0.88
RPAIN-211ENST00000572174 TMEM97Q5BJF2 176 aa9.54□□□□□ -0.88
RPAIN-211ENST00000572174 LINC01556Q5JQF7 62 aa9.54□□□□□ -0.88
RPAIN-211ENST00000572174 LYZL1Q6UWQ5 148 aa9.54□□□□□ -0.88
RPAIN-211ENST00000572174 Q6ZSN1 163 aa9.54□□□□□ -0.88
RPAIN-211ENST00000572174 C14orf178Q8N769 122 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-211ENST00000572174 OR10G8Q8NGN5 311 aa9.54□□□□□ -0.88
RPAIN-211ENST00000572174 GFRA4Q9GZZ7 299 aa9.54□□□□□ -0.88
RPAIN-211ENST00000572174 DPH3P1Q9H4G8 78 aa9.54□□□□□ -0.88
RPAIN-211ENST00000572174 OSTCQ9NRP0 149 aa9.54□□□□□ -0.88
RPAIN-211ENST00000572174 NAT8Q9UHE5 227 aa9.54□□□□□ -0.88
RPAIN-211ENST00000572174 MUC21A0A0G2JKD1 596 aa9.53□□□□□ -0.88
RPAIN-211ENST00000572174 MUC21A0A140T8X8 626 aa9.53□□□□□ -0.88
RPAIN-211ENST00000572174 WFDC10BQ8IUB3 73 aa9.53□□□□□ -0.88
RPAIN-211ENST00000572174 MGPP08493 103 aa9.52□□□□□ -0.89
RPAIN-211ENST00000572174 NTF3P20783 257 aa9.52□□□□□ -0.89
RPAIN-211ENST00000572174 SSTP61278 116 aa9.52□□□□□ -0.89
RPAIN-211ENST00000572174 PKIAP61925 76 aa9.52□□□□□ -0.89
RPAIN-211ENST00000572174 KCNIP4Q6PIL6 250 aa9.52□□□□□ -0.89
RPAIN-211ENST00000572174 DNAJC30Q96LL9 226 aa9.52□□□□□ -0.89
RPAIN-211ENST00000572174 URGCP-MRPS24S4R325 110 aa9.52□□□□□ -0.89
RPAIN-211ENST00000572174 TWIST1Q15672 202 aa9.51□□□□□ -0.89
RPAIN-211ENST00000572174 DAZ4Q86SG3 579 aaKnown RBP9.51□□□□□ -0.89
RPAIN-211ENST00000572174 TSKUQ8WUA8 353 aa9.51□□□□□ -0.89
RPAIN-211ENST00000572174 DAZ3Q9NR90 486 aaKnown RBP9.51□□□□□ -0.89
RPAIN-211ENST00000572174 MSRB1Q9NZV6 116 aa9.51□□□□□ -0.89
RPAIN-211ENST00000572174 LINC00315P59091 139 aa9.5□□□□□ -0.89
RPAIN-211ENST00000572174 UBE2D3P61077 147 aa9.5□□□□□ -0.89
RPAIN-211ENST00000572174 UBE2D2P62837 147 aa9.5□□□□□ -0.89
RPAIN-211ENST00000572174 ADIRFQ15847 76 aa9.5□□□□□ -0.89
RPAIN-211ENST00000572174 NEXN-AS1Q8NBZ9 246 aa9.5□□□□□ -0.89
RPAIN-211ENST00000572174 FRZBQ92765 325 aa9.5□□□□□ -0.89
RPAIN-211ENST00000572174 ISOC2Q96AB3 205 aa9.5□□□□□ -0.89
RPAIN-211ENST00000572174 CHCHD7Q9BUK0 85 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms