RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 SAPCD1Q5SSQ6 148 aa12.71□□□□□ -0.37
CCDC40-206ENST00000572083 OR11H4Q8NGC9 324 aa12.71□□□□□ -0.37
CCDC40-206ENST00000572083 CCDC32Q9BV29 185 aa12.71□□□□□ -0.37
CCDC40-206ENST00000572083 TRAV34A0A0B4J273 112 aa12.7□□□□□ -0.38
CCDC40-206ENST00000572083 MPC2O95563 127 aa12.7□□□□□ -0.38
CCDC40-206ENST00000572083 ANGP03950 147 aaKnown RBP12.7□□□□□ -0.38
CCDC40-206ENST00000572083 GCHFRP30047 84 aa12.7□□□□□ -0.38
CCDC40-206ENST00000572083 UBE2D3P61077 147 aa12.7□□□□□ -0.38
CCDC40-206ENST00000572083 UBE2D2P62837 147 aa12.7□□□□□ -0.38
CCDC40-206ENST00000572083 DGAT2L7PQ6IED9 249 aa12.7□□□□□ -0.38
CCDC40-206ENST00000572083 MZT2BQ6NZ67 158 aa12.7□□□□□ -0.38
CCDC40-206ENST00000572083 ARL2-SNX15V9GYD0 113 aa12.7□□□□□ -0.38
CCDC40-206ENST00000572083 A0A0D9SG52 128 aa12.69□□□□□ -0.38
CCDC40-206ENST00000572083 ARMS2P0C7Q2 107 aa12.69□□□□□ -0.38
CCDC40-206ENST00000572083 PET100P0DJ07 73 aa12.69□□□□□ -0.38
CCDC40-206ENST00000572083 RPL36AP83881 106 aaKnown RBP12.69□□□□□ -0.38
CCDC40-206ENST00000572083 SUN5Q8TC36 379 aa12.69□□□□□ -0.38
CCDC40-206ENST00000572083 RPL36ALQ969Q0 106 aaKnown RBP12.69□□□□□ -0.38
CCDC40-206ENST00000572083 TRBV6-8A0A0A6YYG3 113 aa12.68□□□□□ -0.38
CCDC40-206ENST00000572083 GRIFINA4D1Z8 144 aa12.68□□□□□ -0.38
CCDC40-206ENST00000572083 FABP5P3A8MUU1 101 aa12.68□□□□□ -0.38
CCDC40-206ENST00000572083 M0R036 132 aa12.68□□□□□ -0.38
CCDC40-206ENST00000572083 RAB24Q969Q5 203 aa12.68□□□□□ -0.38
CCDC40-206ENST00000572083 SFRP2Q96HF1 295 aa12.68□□□□□ -0.38
CCDC40-206ENST00000572083 TRBV7-3A0A075B6L6 115 aa12.67□□□□□ -0.38
CCDC40-206ENST00000572083 TRBV10-1A0A0K0K1A3 114 aa12.67□□□□□ -0.38
CCDC40-206ENST00000572083 M0R381 172 aa12.67□□□□□ -0.38
CCDC40-206ENST00000572083 CLPSL2Q6UWE3 100 aa12.67□□□□□ -0.38
CCDC40-206ENST00000572083 SDIM1Q6ZPB5 146 aa12.67□□□□□ -0.38
CCDC40-206ENST00000572083 ENKURQ8TC29 256 aa12.67□□□□□ -0.38
CCDC40-206ENST00000572083 KRBOX1C9JBD0 128 aa12.66□□□□□ -0.38
CCDC40-206ENST00000572083 RPL19P84098 196 aaKnown RBP12.66□□□□□ -0.38
CCDC40-206ENST00000572083 PHLDA3Q9Y5J5 127 aa12.66□□□□□ -0.38
CCDC40-206ENST00000572083 ODF1Q14990 250 aa12.65□□□□□ -0.38
CCDC40-206ENST00000572083 MIAQ16674 131 aa12.65□□□□□ -0.38
CCDC40-206ENST00000572083 PTTG1O95997 202 aa12.64□□□□□ -0.39
CCDC40-206ENST00000572083 DNLZQ5SXM8 178 aa12.64□□□□□ -0.39
CCDC40-206ENST00000572083 Q86TA4 180 aa12.64□□□□□ -0.39
CCDC40-206ENST00000572083 HSD17B11Q8NBQ5 300 aa12.64□□□□□ -0.39
CCDC40-206ENST00000572083 CHCHD5Q9BSY4 110 aa12.64□□□□□ -0.39
CCDC40-206ENST00000572083 TMEM167BQ9NRX6 74 aa12.64□□□□□ -0.39
CCDC40-206ENST00000572083 TMSB15BA0A087X1C1 80 aa12.63□□□□□ -0.39
CCDC40-206ENST00000572083 TPT1P13693 172 aaKnown RBP12.63□□□□□ -0.39
CCDC40-206ENST00000572083 CRIP1P50238 77 aa12.63□□□□□ -0.39
CCDC40-206ENST00000572083 SH2D1AO60880 128 aa12.62□□□□□ -0.39
CCDC40-206ENST00000572083 CXorf1O96002 111 aa12.62□□□□□ -0.39
CCDC40-206ENST00000572083 CIRBPQ14011 172 aaKnown RBP12.62□□□□□ -0.39
CCDC40-206ENST00000572083 KRTAP26-1Q6PEX3 210 aa12.62□□□□□ -0.39
CCDC40-206ENST00000572083 OR10G8Q8NGN5 311 aa12.62□□□□□ -0.39
CCDC40-206ENST00000572083 IFNA7P01567 189 aa12.61□□□□□ -0.39
CCDC40-206ENST00000572083 CHTF8P0CG12 524 aa12.61□□□□□ -0.39
CCDC40-206ENST00000572083 ZFP82Q8N141 532 aa12.61□□□□□ -0.39
CCDC40-206ENST00000572083 NEXN-AS1Q8NBZ9 246 aa12.61□□□□□ -0.39
CCDC40-206ENST00000572083 DPH3P1Q9H4G8 78 aa12.61□□□□□ -0.39
CCDC40-206ENST00000572083 INMT-MINDY4F8WBC2 141 aa12.6□□□□□ -0.39
CCDC40-206ENST00000572083 SSNA1O43805 119 aa12.6□□□□□ -0.39
CCDC40-206ENST00000572083 ZNF56Q15929 161 aa12.6□□□□□ -0.39
CCDC40-206ENST00000572083 DPH3Q96FX2 82 aa12.6□□□□□ -0.39
CCDC40-206ENST00000572083 A0A087WYN8 130 aa12.59□□□□□ -0.39
CCDC40-206ENST00000572083 A0A1W2PRE2 83 aa12.59□□□□□ -0.39
CCDC40-206ENST00000572083 PEX7O00628 323 aa12.59□□□□□ -0.39
CCDC40-206ENST00000572083 LINC00269Q8N2A0 174 aa12.59□□□□□ -0.39
CCDC40-206ENST00000572083 PRR34Q9NV39 138 aa12.59□□□□□ -0.39
CCDC40-206ENST00000572083 PHOX2AO14813 284 aa12.58□□□□□ -0.4
CCDC40-206ENST00000572083 ATP6V0CP27449 155 aa12.58□□□□□ -0.4
CCDC40-206ENST00000572083 UBE2G2P60604 165 aa12.58□□□□□ -0.4
CCDC40-206ENST00000572083 PKIAP61925 76 aa12.58□□□□□ -0.4
CCDC40-206ENST00000572083 CNBPP62633 177 aaKnown RBP12.58□□□□□ -0.4
CCDC40-206ENST00000572083 FAM162BQ5T6X4 162 aa12.58□□□□□ -0.4
CCDC40-206ENST00000572083 PSMG3Q9BT73 122 aaPredicted RBP12.58□□□□□ -0.4
CCDC40-206ENST00000572083 IGLV10-54A0A075B6I4 117 aa12.57□□□□□ -0.4
CCDC40-206ENST00000572083 hDV102S1A0JD36 115 aa12.57□□□□□ -0.4
CCDC40-206ENST00000572083 RAB4BP61018 213 aa12.57□□□□□ -0.4
CCDC40-206ENST00000572083 RBX1P62877 108 aa12.57□□□□□ -0.4
CCDC40-206ENST00000572083 GAGE6Q13070 117 aa12.57□□□□□ -0.4
CCDC40-206ENST00000572083 CLRN3Q8NCR9 226 aa12.57□□□□□ -0.4
CCDC40-206ENST00000572083 ACTR3CQ9C0K3 210 aaPredicted RBP12.57□□□□□ -0.4
CCDC40-206ENST00000572083 IGHV3-64A0A075B6Q5 118 aa12.56□□□□□ -0.4
CCDC40-206ENST00000572083 MBP02144 154 aa12.56□□□□□ -0.4
CCDC40-206ENST00000572083 LINC01559Q495D7 138 aa12.56□□□□□ -0.4
CCDC40-206ENST00000572083 NTM-AS1Q6ZSK4 140 aa12.56□□□□□ -0.4
CCDC40-206ENST00000572083 SPACA4Q8TDM5 124 aa12.56□□□□□ -0.4
CCDC40-206ENST00000572083 PRR27Q6MZM9 219 aa12.55□□□□□ -0.4
CCDC40-206ENST00000572083 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.55□□□□□ -0.4
CCDC40-206ENST00000572083 RNF185Q96GF1 192 aa12.55□□□□□ -0.4
CCDC40-206ENST00000572083 LINC01600Q96MT4 127 aa12.55□□□□□ -0.4
CCDC40-206ENST00000572083 COX8CQ7Z4L0 72 aa12.54□□□□□ -0.4
CCDC40-206ENST00000572083 KIF25-AS1Q9Y6Z4 181 aa12.54□□□□□ -0.4
CCDC40-206ENST00000572083 SLPIP03973 132 aa12.53□□□□□ -0.4
CCDC40-206ENST00000572083 SERF2P84101 59 aa12.53□□□□□ -0.4
CCDC40-206ENST00000572083 ZNF674Q2M3X9 581 aa12.53□□□□□ -0.4
CCDC40-206ENST00000572083 C7orf33Q8WU49 177 aa12.53□□□□□ -0.4
CCDC40-206ENST00000572083 HIST1H2BAQ96A08 127 aa12.53□□□□□ -0.4
CCDC40-206ENST00000572083 DERL1Q9BUN8 251 aa12.53□□□□□ -0.4
CCDC40-206ENST00000572083 ZFP30Q9Y2G7 519 aa12.53□□□□□ -0.4
CCDC40-206ENST00000572083 UPK1BO75841 260 aa12.52□□□□□ -0.41
CCDC40-206ENST00000572083 REG3AQ06141 175 aa12.52□□□□□ -0.41
CCDC40-206ENST00000572083 ZNF726P1Q15940 193 aa12.52□□□□□ -0.41
CCDC40-206ENST00000572083 OR10AG1Q8NH19 301 aa12.52□□□□□ -0.41
CCDC40-206ENST00000572083 MARVELD1Q9BSK0 173 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms