RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 NANOS2P60321 138 aaKnown RBP9.73□□□□□ -0.85
RPAIN-209ENST00000571558 CACNG7P62955 275 aa9.73□□□□□ -0.85
RPAIN-209ENST00000571558 PIK3CD-AS1Q5SR53 167 aa9.73□□□□□ -0.85
RPAIN-209ENST00000571558 RASL10AQ92737 203 aa9.73□□□□□ -0.85
RPAIN-209ENST00000571558 NOP10Q9NPE3 64 aaKnown RBP9.73□□□□□ -0.85
RPAIN-209ENST00000571558 MSRB1Q9NZV6 116 aa9.73□□□□□ -0.85
RPAIN-209ENST00000571558 FAT2Q9NYQ8 4349 aa9.73□□□□□ -0.85
RPAIN-209ENST00000571558 TRBV24-1A0A075B6N3 115 aa9.73□□□□□ -0.85
RPAIN-209ENST00000571558 DEFB4AO15263 64 aa9.73□□□□□ -0.85
RPAIN-209ENST00000571558 NTF3P20783 257 aa9.73□□□□□ -0.85
RPAIN-209ENST00000571558 LGALS9BQ3B8N2 356 aa9.73□□□□□ -0.85
RPAIN-209ENST00000571558 ZNF876PQ49A33 203 aa9.73□□□□□ -0.85
RPAIN-209ENST00000571558 ATP5L2Q7Z4Y8 100 aa9.73□□□□□ -0.85
RPAIN-209ENST00000571558 ZFP82Q8N141 532 aa9.73□□□□□ -0.85
RPAIN-209ENST00000571558 LINC00612Q8N6U2 182 aa9.73□□□□□ -0.85
RPAIN-209ENST00000571558 TGIF2-C20orf24A0A0A6YYL0 155 aa9.72□□□□□ -0.85
RPAIN-209ENST00000571558 M0R381 172 aa9.72□□□□□ -0.85
RPAIN-209ENST00000571558 EMP1P54849 157 aa9.72□□□□□ -0.85
RPAIN-209ENST00000571558 SPANXN1Q5VSR9 72 aa9.72□□□□□ -0.85
RPAIN-209ENST00000571558 MRPL54Q6P161 138 aaKnown RBP9.72□□□□□ -0.85
RPAIN-209ENST00000571558 Q6ZTI0 123 aa9.72□□□□□ -0.85
RPAIN-209ENST00000571558 NDUFAF3Q9BU61 184 aa9.72□□□□□ -0.85
RPAIN-209ENST00000571558 MRPL16Q9NX20 251 aaKnown RBP9.72□□□□□ -0.85
RPAIN-209ENST00000571558 LYRM9A8MSI8 78 aa9.71□□□□□ -0.86
RPAIN-209ENST00000571558 IGLL5B9A064 214 aa9.71□□□□□ -0.86
RPAIN-209ENST00000571558 SSTP61278 116 aa9.71□□□□□ -0.86
RPAIN-209ENST00000571558 RIGQ13278 110 aa9.71□□□□□ -0.86
RPAIN-209ENST00000571558 TWIST1Q15672 202 aa9.71□□□□□ -0.86
RPAIN-209ENST00000571558 BORCS7Q96B45 105 aa9.71□□□□□ -0.86
RPAIN-209ENST00000571558 DKK2Q9UBU2 259 aa9.71□□□□□ -0.86
RPAIN-209ENST00000571558 DNAH2Q9P225 4427 aa9.7□□□□□ -0.86
RPAIN-209ENST00000571558 TRGV1A0A0A0MS02 117 aa9.7□□□□□ -0.86
RPAIN-209ENST00000571558 A0A1B0GW15 77 aa9.7□□□□□ -0.86
RPAIN-209ENST00000571558 PRSS29PA6NIE9 313 aa9.7□□□□□ -0.86
RPAIN-209ENST00000571558 COLCA2A8K830 154 aa9.7□□□□□ -0.86
RPAIN-209ENST00000571558 FAM222AQ5U5X8 452 aa9.7□□□□□ -0.86
RPAIN-209ENST00000571558 GATD1Q8NB37 220 aa9.7□□□□□ -0.86
RPAIN-209ENST00000571558 SYT8Q8NBV8 401 aa9.7□□□□□ -0.86
RPAIN-209ENST00000571558 JPT2Q9H910 190 aa9.7□□□□□ -0.86
RPAIN-209ENST00000571558 CELA1Q9UNI1 258 aa9.7□□□□□ -0.86
RPAIN-209ENST00000571558 KIF25-AS1Q9Y6Z4 181 aa9.7□□□□□ -0.86
RPAIN-209ENST00000571558 HBBP68871 147 aa9.69□□□□□ -0.86
RPAIN-209ENST00000571558 RASL11AQ6T310 242 aa9.69□□□□□ -0.86
RPAIN-209ENST00000571558 POM121L12Q8N7R1 296 aa9.69□□□□□ -0.86
RPAIN-209ENST00000571558 C18orf15Q96N68 181 aa9.69□□□□□ -0.86
RPAIN-209ENST00000571558 DNAH17Q9UFH2 4485 aa9.68□□□□□ -0.86
RPAIN-209ENST00000571558 GAGE12BA1L429 117 aa9.68□□□□□ -0.86
RPAIN-209ENST00000571558 GAGE7O76087 117 aa9.68□□□□□ -0.86
RPAIN-209ENST00000571558 CRYGDP07320 174 aa9.68□□□□□ -0.86
RPAIN-209ENST00000571558 GAGE12FP0CL80 117 aa9.68□□□□□ -0.86
RPAIN-209ENST00000571558 GAGE12GP0CL81 117 aa9.68□□□□□ -0.86
RPAIN-209ENST00000571558 GAGE12IP0CL82 117 aa9.68□□□□□ -0.86
RPAIN-209ENST00000571558 CAMPP49913 170 aa9.68□□□□□ -0.86
RPAIN-209ENST00000571558 UFSP1Q6NVU6 142 aa9.68□□□□□ -0.86
RPAIN-209ENST00000571558 FAM210BQ96KR6 192 aa9.68□□□□□ -0.86
RPAIN-209ENST00000571558 DNAH11Q96DT5 4516 aa9.68□□□□□ -0.86
RPAIN-209ENST00000571558 RS1O15537 224 aa9.67□□□□□ -0.86
RPAIN-209ENST00000571558 SPART-AS1P0CW21 52 aa9.67□□□□□ -0.86
RPAIN-209ENST00000571558 EVI2AP22794 236 aa9.67□□□□□ -0.86
RPAIN-209ENST00000571558 LINC00315P59091 139 aa9.67□□□□□ -0.86
RPAIN-209ENST00000571558 CFAP126Q5VTH2 177 aa9.67□□□□□ -0.86
RPAIN-209ENST00000571558 TMEM136Q6ZRR5 245 aa9.67□□□□□ -0.86
RPAIN-209ENST00000571558 AP1S3Q96PC3 154 aa9.67□□□□□ -0.86
RPAIN-209ENST00000571558 SAMD10Q9BYL1 202 aa9.67□□□□□ -0.86
RPAIN-209ENST00000571558 TMEM191AQ9H0A3 160 aa9.67□□□□□ -0.86
RPAIN-209ENST00000571558 A8MWV9 139 aa9.66□□□□□ -0.86
RPAIN-209ENST00000571558 S100A8P05109 93 aa9.66□□□□□ -0.86
RPAIN-209ENST00000571558 TRGC1P0CF51 173 aa9.66□□□□□ -0.86
RPAIN-209ENST00000571558 C14orf178Q8N769 122 aaPredicted RBP9.66□□□□□ -0.86
RPAIN-209ENST00000571558 PKD1P98161 4303 aa9.66□□□□□ -0.86
RPAIN-209ENST00000571558 DYNC1H1Q14204 4646 aaKnown RBP9.66□□□□□ -0.86
RPAIN-209ENST00000571558 TRAV10A0A0B4J240 114 aa9.65□□□□□ -0.86
RPAIN-209ENST00000571558 TRAV4A0A0B4J268 109 aa9.65□□□□□ -0.86
RPAIN-209ENST00000571558 TEX48A0A1B0GUV7 120 aa9.65□□□□□ -0.86
RPAIN-209ENST00000571558 RTL8CO15255 209 aa9.65□□□□□ -0.86
RPAIN-209ENST00000571558 P0DMU3 169 aa9.65□□□□□ -0.86
RPAIN-209ENST00000571558 FAM231AP0DMU4 169 aa9.65□□□□□ -0.86
RPAIN-209ENST00000571558 FAM231CP0DMU5 169 aa9.65□□□□□ -0.86
RPAIN-209ENST00000571558 DEFB130BP0DP73 79 aa9.65□□□□□ -0.86
RPAIN-209ENST00000571558 DEFB130AP0DP74 79 aa9.65□□□□□ -0.86
RPAIN-209ENST00000571558 GNB1LQ9BYB4 327 aa9.65□□□□□ -0.86
RPAIN-209ENST00000571558 KRTAP4-5Q9BYR2 181 aa9.65□□□□□ -0.86
RPAIN-209ENST00000571558 TRGV2A0A075B6R0 118 aa9.65□□□□□ -0.87
RPAIN-209ENST00000571558 A0A087WWL8 130 aa9.65□□□□□ -0.87
RPAIN-209ENST00000571558 RNF185Q96GF1 192 aa9.65□□□□□ -0.87
RPAIN-209ENST00000571558 ZNF479Q96JC4 524 aa9.65□□□□□ -0.87
RPAIN-209ENST00000571558 DPH3P1Q9H4G8 78 aa9.65□□□□□ -0.87
RPAIN-209ENST00000571558 RAB5AP20339 215 aa9.64□□□□□ -0.87
RPAIN-209ENST00000571558 DAD1P61803 113 aa9.64□□□□□ -0.87
RPAIN-209ENST00000571558 C12orf74Q32Q52 190 aa9.64□□□□□ -0.87
RPAIN-209ENST00000571558 COX19Q49B96 90 aa9.64□□□□□ -0.87
RPAIN-209ENST00000571558 FAM104BQ5XKR9 115 aa9.64□□□□□ -0.87
RPAIN-209ENST00000571558 ZFP2Q6ZN57 461 aa9.64□□□□□ -0.87
RPAIN-209ENST00000571558 SMIM15Q7Z3B0 74 aa9.64□□□□□ -0.87
RPAIN-209ENST00000571558 OR4C5Q8NGB2 326 aa9.64□□□□□ -0.87
RPAIN-209ENST00000571558 RAB4AP20338 218 aa9.63□□□□□ -0.87
RPAIN-209ENST00000571558 SLAQ13239 276 aa9.63□□□□□ -0.87
RPAIN-209ENST00000571558 AMN1Q8IY45 258 aa9.63□□□□□ -0.87
RPAIN-209ENST00000571558 NACAE9PAV3 2078 aa9.63□□□□□ -0.87
RPAIN-209ENST00000571558 RHODO00212 210 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms