RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 LYPD5Q6UWN5 251 aa4.79□□□□□ -1.64
SMG6-209ENST00000571442 ZFP82Q8N141 532 aa4.79□□□□□ -1.64
SMG6-209ENST00000571442 FER1L6-AS1Q8NA97 138 aa4.79□□□□□ -1.64
SMG6-209ENST00000571442 RPP21Q9H633 154 aaKnown RBP4.79□□□□□ -1.64
SMG6-209ENST00000571442 ICOSQ9Y6W8 199 aa4.79□□□□□ -1.64
SMG6-209ENST00000571442 KIF25-AS1Q9Y6Z4 181 aa4.79□□□□□ -1.64
SMG6-209ENST00000571442 TRBV6-4A0A1B0GX49 114 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 GAGE12JA6NER3 117 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 CTRLP40313 264 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 CCL18P55774 89 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 RPL23P62829 140 aaKnown RBP4.78□□□□□ -1.64
SMG6-209ENST00000571442 GAGE1Q13065 139 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 GAGE4Q13068 117 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 GAGE5Q13069 117 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 SLAQ13239 276 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 MRPL23Q16540 153 aaKnown RBP4.78□□□□□ -1.64
SMG6-209ENST00000571442 GAGE13Q4V321 117 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 CLLU1Q5K131 121 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 LYZL1Q6UWQ5 148 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 ZFP2Q6ZN57 461 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 FAM231DQ6ZW35 169 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 SYT8Q8NBV8 401 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 DAZAP1Q96EP5 407 aaKnown RBP4.78□□□□□ -1.64
SMG6-209ENST00000571442 UPK3BQ9BT76 320 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 TPPP3Q9BW30 176 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 MRPS16Q9Y3D3 137 aaKnown RBP4.78□□□□□ -1.64
SMG6-209ENST00000571442 LY96Q9Y6Y9 160 aa4.78□□□□□ -1.64
SMG6-209ENST00000571442 RTL8CO15255 209 aa4.77□□□□□ -1.65
SMG6-209ENST00000571442 GATCO43716 136 aaKnown RBP4.77□□□□□ -1.65
SMG6-209ENST00000571442 SRIP30626 198 aa4.77□□□□□ -1.65
SMG6-209ENST00000571442 FOXA3P55318 350 aaPredicted RBP4.77□□□□□ -1.65
SMG6-209ENST00000571442 RPS20P60866 119 aaKnown RBP4.77□□□□□ -1.65
SMG6-209ENST00000571442 PEA15Q15121 130 aa4.77□□□□□ -1.65
SMG6-209ENST00000571442 RHOHQ15669 191 aa4.77□□□□□ -1.65
SMG6-209ENST00000571442 SPANXN1Q5VSR9 72 aa4.77□□□□□ -1.65
SMG6-209ENST00000571442 NEGR1Q7Z3B1 354 aa4.77□□□□□ -1.65
SMG6-209ENST00000571442 WFDC10BQ8IUB3 73 aa4.77□□□□□ -1.65
SMG6-209ENST00000571442 Q8N3U1 123 aa4.77□□□□□ -1.65
SMG6-209ENST00000571442 ISOC2Q96AB3 205 aa4.77□□□□□ -1.65
SMG6-209ENST00000571442 Q9H8V8 135 aa4.77□□□□□ -1.65
SMG6-209ENST00000571442 V9GYV3 84 aa4.77□□□□□ -1.65
SMG6-209ENST00000571442 PKD1P98161 4303 aa4.77□□□□□ -1.65
SMG6-209ENST00000571442 DNAH5Q8TE73 4624 aa4.77□□□□□ -1.65
SMG6-209ENST00000571442 HERC2O95714 4834 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 NBDYA0A0U1RRE5 68 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 CIDEAO60543 219 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 ADCYAP1P18509 176 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 NTF3P20783 257 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 EVI2AP22794 236 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 ERVFC1-1P60608 527 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 TMEM241Q24JQ0 296 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 NEXN-AS1Q8NBZ9 246 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 PGLYRP4Q96LB8 373 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 PRADC1Q9BSG0 188 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 CNFNQ9BYD5 112 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 BIN3Q9NQY0 253 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 OSTCQ9NRP0 149 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 NAT8Q9UHE5 227 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 TNFRSF18Q9Y5U5 241 aa4.76□□□□□ -1.65
SMG6-209ENST00000571442 RHODO00212 210 aa4.75□□□□□ -1.65
SMG6-209ENST00000571442 FAM3BP58499 235 aaPredicted RBP4.75□□□□□ -1.65
SMG6-209ENST00000571442 CACNG7P62955 275 aa4.75□□□□□ -1.65
SMG6-209ENST00000571442 ADIRFQ15847 76 aa4.75□□□□□ -1.65
SMG6-209ENST00000571442 ZNF56Q15929 161 aa4.75□□□□□ -1.65
SMG6-209ENST00000571442 SUMO4Q6EEV6 95 aa4.75□□□□□ -1.65
SMG6-209ENST00000571442 KRTAP17-1Q9BYP8 105 aa4.75□□□□□ -1.65
SMG6-209ENST00000571442 SMDT1Q9H4I9 107 aa4.75□□□□□ -1.65
SMG6-209ENST00000571442 IGHV3-38A0A0C4DH36 116 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 A0A1W2PPQ1 181 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 XKRY2A2RUG3 117 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 HIGD1CA8MV81 97 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 A8MWL6 223 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 F2Z2F3 143 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 SIVA1O15304 175 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 GAS8-AS1O95177 125 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 MGPP08493 103 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 RAB4BP61018 213 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 UBE2D3P61077 147 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 RAB14P61106 215 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 UBE2D2P62837 147 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 FAM74A3Q4VXF1 159 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 CT83Q5H943 113 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 SOHLH1Q5JUK2 328 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 ATP6V0E2Q8NHE4 81 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 TSKUQ8WUA8 353 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 AP1S3Q96PC3 154 aa4.74□□□□□ -1.65
SMG6-209ENST00000571442 PKHD1P08F94 4074 aa4.73□□□□□ -1.65
SMG6-209ENST00000571442 TRAV26-2A0A0B4J265 109 aa4.73□□□□□ -1.65
SMG6-209ENST00000571442 A0A1B0GVY2 172 aa4.73□□□□□ -1.65
SMG6-209ENST00000571442 F5H697 171 aa4.73□□□□□ -1.65
SMG6-209ENST00000571442 M0QY20 66 aa4.73□□□□□ -1.65
SMG6-209ENST00000571442 TIRAPP58753 221 aa4.73□□□□□ -1.65
SMG6-209ENST00000571442 TWIST1Q15672 202 aa4.73□□□□□ -1.65
SMG6-209ENST00000571442 WDR73Q6P4I2 378 aa4.73□□□□□ -1.65
SMG6-209ENST00000571442 NTM-AS1Q6ZSK4 140 aa4.73□□□□□ -1.65
SMG6-209ENST00000571442 NUP35Q8NFH5 326 aa4.73□□□□□ -1.65
SMG6-209ENST00000571442 OR10G8Q8NGN5 311 aa4.73□□□□□ -1.65
SMG6-209ENST00000571442 DEFB104AQ8WTQ1 72 aa4.73□□□□□ -1.65
SMG6-209ENST00000571442 GTSF1LQ9H1H1 148 aa4.73□□□□□ -1.65
SMG6-209ENST00000571442 LRP1BQ9NZR2 4599 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms