RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 MRPS16Q9Y3D3 137 aaKnown RBP4.67□□□□□ -1.66
CHD3-213ENST00000571249 TRBV19A0A075B6N1 114 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 TRAV26-1A0A087WT03 109 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 ZNF98A6NK75 572 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 PEX7O00628 323 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 ISLRO14498 428 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 RS1O15537 224 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 IL4P05112 153 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 S100PP25815 95 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 GALR1P47211 349 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 GNG4P50150 75 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 FXYD7P58549 80 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 TMEM183BQ1AE95 376 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 Q56UQ5 140 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 CENPWQ5EE01 88 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 NFE4Q86UQ8 179 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 OR10G8Q8NGN5 311 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 MSRB1Q9NZV6 116 aa4.66□□□□□ -1.66
CHD3-213ENST00000571249 PGPA6NDG6 321 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 ZNF253O75346 499 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 GAGE7O76087 117 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 TCRAP04437 139 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 GAGE12FP0CL80 117 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 GAGE12GP0CL81 117 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 GAGE12IP0CL82 117 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 RPL7P18124 248 aaKnown RBP4.65□□□□□ -1.67
CHD3-213ENST00000571249 RPS10P46783 165 aaKnown RBP4.65□□□□□ -1.67
CHD3-213ENST00000571249 RANP62826 216 aaKnown RBP4.65□□□□□ -1.67
CHD3-213ENST00000571249 RELQ04864 619 aaPredicted RBP4.65□□□□□ -1.67
CHD3-213ENST00000571249 GAGE1Q13065 139 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 GAGE4Q13068 117 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 PSMG4Q5JS54 123 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 KCNIP4Q6PIL6 250 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 COX8CQ7Z4L0 72 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 NTN5Q8WTR8 489 aaPredicted RBP4.65□□□□□ -1.67
CHD3-213ENST00000571249 FMC1Q96HJ9 113 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 IL36BQ9NZH7 164 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 URGCP-MRPS24S4R325 110 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 V9GYV3 84 aa4.65□□□□□ -1.67
CHD3-213ENST00000571249 FBLL1A6NHQ2 334 aaKnown RBP4.64□□□□□ -1.67
CHD3-213ENST00000571249 H3BMM0 161 aa4.64□□□□□ -1.67
CHD3-213ENST00000571249 LTAP01374 205 aa4.64□□□□□ -1.67
CHD3-213ENST00000571249 SLC25A5P05141 298 aaKnown RBP4.64□□□□□ -1.67
CHD3-213ENST00000571249 ATP5G1P05496 136 aa4.64□□□□□ -1.67
CHD3-213ENST00000571249 HOXA5P20719 270 aa4.64□□□□□ -1.67
CHD3-213ENST00000571249 RRN3P1Q2M238 152 aa4.64□□□□□ -1.67
CHD3-213ENST00000571249 COX19Q49B96 90 aa4.64□□□□□ -1.67
CHD3-213ENST00000571249 COA6Q5JTJ3 125 aaKnown RBP4.64□□□□□ -1.67
CHD3-213ENST00000571249 C1orf194Q5T5A4 169 aa4.64□□□□□ -1.67
CHD3-213ENST00000571249 TOMM20LQ6UXN7 152 aa4.64□□□□□ -1.67
CHD3-213ENST00000571249 Q6ZSA8 131 aa4.64□□□□□ -1.67
CHD3-213ENST00000571249 BAGE2Q86Y30 109 aa4.64□□□□□ -1.67
CHD3-213ENST00000571249 GPR82Q96P67 336 aa4.64□□□□□ -1.67
CHD3-213ENST00000571249 ZNF492Q9P255 531 aa4.64□□□□□ -1.67
CHD3-213ENST00000571249 SMIM27A0A1W2PRY6 76 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 H3BTX0 84 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 BUB3O43684 328 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 HIST1H2BKO60814 126 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 IGKV3-20P01619 116 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 IGLV2-11P01706 119 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 TRGC2P03986 189 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 HIST1H2BJP06899 126 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 HIST1H2BOP23527 126 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 HIST1H2BBP33778 126 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 MEOX2P50222 304 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 HIST1H2BDP58876 126 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 HIST1H2BCP62807 126 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 PSG9Q00887 426 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 HIST2H2BEQ16778 126 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.63□□□□□ -1.67
CHD3-213ENST00000571249 SCXQ7RTU7 201 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 ZFP82Q8N141 532 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 TMEM75Q8N9X5 138 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 BLNKQ8WV28 456 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 HIST1H2BHQ93079 126 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 LINC00479Q96M42 142 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 HIST1H2BNQ99877 126 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 HIST1H2BMQ99879 126 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 GOLT1BQ9Y3E0 138 aa4.63□□□□□ -1.67
CHD3-213ENST00000571249 A0A0J9YY99 117 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 C19orf71A6NCJ1 209 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 FAM231BA6NCW3 169 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 LYRM9A8MSI8 78 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 SIVA1O15304 175 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 S100A6P06703 90 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 TRGC1P0CF51 173 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 UBE2G1P62253 170 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 GNG5P63218 68 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 RPL19P84098 196 aaKnown RBP4.62□□□□□ -1.67
CHD3-213ENST00000571249 OR5I1Q13606 314 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 IBA57Q5T440 356 aaKnown RBP4.62□□□□□ -1.67
CHD3-213ENST00000571249 RASL11AQ6T310 242 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 Q86TA4 180 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 TMEM183AQ8IXX5 376 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 C1orf158Q8N1D5 194 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 DCANP1Q8TF63 244 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 RPH3ALQ9UNE2 315 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 ZFP30Q9Y2G7 519 aa4.62□□□□□ -1.67
CHD3-213ENST00000571249 SLC17A3O00476 420 aa4.61□□□□□ -1.67
CHD3-213ENST00000571249 GATCO43716 136 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms