RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 B4DEV8 164 aa8.36□□□□□ -1.07
CTDNEP1-205ENST00000570828 ZNF345Q14585 488 aa8.36□□□□□ -1.07
CTDNEP1-205ENST00000570828 LGALSLQ3ZCW2 172 aaPredicted RBP8.36□□□□□ -1.07
CTDNEP1-205ENST00000570828 LINC01556Q5JQF7 62 aa8.36□□□□□ -1.07
CTDNEP1-205ENST00000570828 CST9LP1Q5W188 147 aa8.36□□□□□ -1.07
CTDNEP1-205ENST00000570828 PET117Q6UWS5 81 aa8.36□□□□□ -1.07
CTDNEP1-205ENST00000570828 ZC2HC1AQ96GY0 325 aa8.36□□□□□ -1.07
CTDNEP1-205ENST00000570828 IL36BQ9NZH7 164 aa8.36□□□□□ -1.07
CTDNEP1-205ENST00000570828 ZFP30Q9Y2G7 519 aa8.36□□□□□ -1.07
CTDNEP1-205ENST00000570828 A0A087WTM6 91 aa8.35□□□□□ -1.07
CTDNEP1-205ENST00000570828 H3BVH4 76 aa8.35□□□□□ -1.07
CTDNEP1-205ENST00000570828 M0R036 132 aa8.35□□□□□ -1.07
CTDNEP1-205ENST00000570828 SH2D1AO60880 128 aa8.35□□□□□ -1.07
CTDNEP1-205ENST00000570828 FHITP49789 147 aa8.35□□□□□ -1.07
CTDNEP1-205ENST00000570828 PIK3CD-AS1Q5SR53 167 aa8.35□□□□□ -1.07
CTDNEP1-205ENST00000570828 FAM162BQ5T6X4 162 aa8.35□□□□□ -1.07
CTDNEP1-205ENST00000570828 LELP1Q5T871 98 aa8.35□□□□□ -1.07
CTDNEP1-205ENST00000570828 ZFP2Q6ZN57 461 aa8.35□□□□□ -1.07
CTDNEP1-205ENST00000570828 KCNRGQ8N5I3 272 aa8.35□□□□□ -1.07
CTDNEP1-205ENST00000570828 SYT8Q8NBV8 401 aa8.35□□□□□ -1.07
CTDNEP1-205ENST00000570828 C1orf43Q9BWL3 253 aa8.35□□□□□ -1.07
CTDNEP1-205ENST00000570828 PARLQ9H300 379 aa8.35□□□□□ -1.07
CTDNEP1-205ENST00000570828 PSCAO43653 123 aa8.34□□□□□ -1.07
CTDNEP1-205ENST00000570828 AKR1C3P42330 323 aa8.34□□□□□ -1.07
CTDNEP1-205ENST00000570828 KRTAP5-3Q6L8H2 238 aa8.34□□□□□ -1.07
CTDNEP1-205ENST00000570828 COX8CQ7Z4L0 72 aa8.34□□□□□ -1.07
CTDNEP1-205ENST00000570828 ATP6V0E2Q8NHE4 81 aa8.34□□□□□ -1.07
CTDNEP1-205ENST00000570828 FAM213BQ8TBF2 198 aa8.34□□□□□ -1.07
CTDNEP1-205ENST00000570828 GTSF1LQ9H1H1 148 aa8.34□□□□□ -1.07
CTDNEP1-205ENST00000570828 TRBV6-1A0A0K0K1D8 114 aa8.33□□□□□ -1.08
CTDNEP1-205ENST00000570828 KANTRA0A1W2PQU2 76 aa8.33□□□□□ -1.08
CTDNEP1-205ENST00000570828 UMAD1C9J7I0 102 aa8.33□□□□□ -1.08
CTDNEP1-205ENST00000570828 KRBOX1C9JBD0 128 aa8.33□□□□□ -1.08
CTDNEP1-205ENST00000570828 RHODO00212 210 aa8.33□□□□□ -1.08
CTDNEP1-205ENST00000570828 FUSP35637 526 aaKnown RBP eCLIP8.33□□□□□ -1.08
CTDNEP1-205ENST00000570828 Q8N1X5 172 aa8.33□□□□□ -1.08
CTDNEP1-205ENST00000570828 OR11H4Q8NGC9 324 aa8.33□□□□□ -1.08
CTDNEP1-205ENST00000570828 SFT2D1Q8WV19 159 aa8.33□□□□□ -1.08
CTDNEP1-205ENST00000570828 ZNF471Q9BX82 626 aaPredicted RBP8.33□□□□□ -1.08
CTDNEP1-205ENST00000570828 A0A1B0GV50 99 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 GRIFINA4D1Z8 144 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 GAGE12JA6NER3 117 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 HMSDA8MTL9 139 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 PAGE4O60829 102 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 LTAP01374 205 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 IGHV3-30P01768 117 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 IGHV3-33P01772 117 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 ARMS2P0C7Q2 107 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 SEC11BP0C7V7 166 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 IGHV3-30-3P0DP02 117 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 IGHV3-30-5P0DP03 117 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 CRIP1P50238 77 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 GAGE1Q13065 139 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 GAGE4Q13068 117 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 GAGE5Q13069 117 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 GAGE13Q4V321 117 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 DNLZQ5SXM8 178 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 Q6ZSN1 163 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 Q9HAA7 133 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 SCRT2Q9NQ03 307 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 PHLDA3Q9Y5J5 127 aa8.32□□□□□ -1.08
CTDNEP1-205ENST00000570828 A0A087WWL8 130 aa8.31□□□□□ -1.08
CTDNEP1-205ENST00000570828 TMSB15BA0A087X1C1 80 aa8.31□□□□□ -1.08
CTDNEP1-205ENST00000570828 A0A0D9SG52 128 aa8.31□□□□□ -1.08
CTDNEP1-205ENST00000570828 IBA57-AS1B1ANH7 110 aa8.31□□□□□ -1.08
CTDNEP1-205ENST00000570828 BCL2L11O43521 198 aa8.31□□□□□ -1.08
CTDNEP1-205ENST00000570828 TPT1P13693 172 aaKnown RBP8.31□□□□□ -1.08
CTDNEP1-205ENST00000570828 EIF5AP63241 154 aaKnown RBP8.31□□□□□ -1.08
CTDNEP1-205ENST00000570828 NDUFA5Q16718 116 aa8.31□□□□□ -1.08
CTDNEP1-205ENST00000570828 FAM74A4Q5TZK3 123 aa8.31□□□□□ -1.08
CTDNEP1-205ENST00000570828 SAMD10Q9BYL1 202 aa8.31□□□□□ -1.08
CTDNEP1-205ENST00000570828 JPT2Q9H910 190 aa8.31□□□□□ -1.08
CTDNEP1-205ENST00000570828 A4D1N5 150 aa8.3□□□□□ -1.08
CTDNEP1-205ENST00000570828 M0R381 172 aa8.3□□□□□ -1.08
CTDNEP1-205ENST00000570828 S100A9P06702 114 aaKnown RBP8.3□□□□□ -1.08
CTDNEP1-205ENST00000570828 LINC00694P0DN24 101 aa8.3□□□□□ -1.08
CTDNEP1-205ENST00000570828 LAGE3Q14657 143 aa8.3□□□□□ -1.08
CTDNEP1-205ENST00000570828 UFSP1Q6NVU6 142 aa8.3□□□□□ -1.08
CTDNEP1-205ENST00000570828 Q6ZNX1 250 aa8.3□□□□□ -1.08
CTDNEP1-205ENST00000570828 ZFP82Q8N141 532 aa8.3□□□□□ -1.08
CTDNEP1-205ENST00000570828 C14orf178Q8N769 122 aaPredicted RBP8.3□□□□□ -1.08
CTDNEP1-205ENST00000570828 MBD3L1Q8WWY6 194 aa8.3□□□□□ -1.08
CTDNEP1-205ENST00000570828 A0A087WWC5 75 aa8.29□□□□□ -1.08
CTDNEP1-205ENST00000570828 A0A1B0GVG6 124 aa8.28□□□□□ -1.08
CTDNEP1-205ENST00000570828 SFRP2Q96HF1 295 aa8.28□□□□□ -1.08
CTDNEP1-205ENST00000570828 IGLV5-52A0A0A0MRZ9 124 aa8.27□□□□□ -1.09
CTDNEP1-205ENST00000570828 S100A1P23297 94 aa8.27□□□□□ -1.09
CTDNEP1-205ENST00000570828 GCSHP23434 173 aa8.27□□□□□ -1.09
CTDNEP1-205ENST00000570828 KRTAP10-1P60331 282 aa8.27□□□□□ -1.09
CTDNEP1-205ENST00000570828 NTN5Q8WTR8 489 aaPredicted RBP8.27□□□□□ -1.09
CTDNEP1-205ENST00000570828 TM2D2Q9BX73 214 aa8.27□□□□□ -1.09
CTDNEP1-205ENST00000570828 Q9UF83 564 aa8.27□□□□□ -1.09
CTDNEP1-205ENST00000570828 URGCP-MRPS24S4R325 110 aa8.27□□□□□ -1.09
CTDNEP1-205ENST00000570828 TRAV8-3A0A0A6YYJ7 113 aa8.26□□□□□ -1.09
CTDNEP1-205ENST00000570828 LRCOL1A6NCL2 159 aa8.26□□□□□ -1.09
CTDNEP1-205ENST00000570828 ATP6V1G1O75348 118 aa8.26□□□□□ -1.09
CTDNEP1-205ENST00000570828 TMUB2Q71RG4 321 aa8.26□□□□□ -1.09
CTDNEP1-205ENST00000570828 BAGE2Q86Y30 109 aa8.26□□□□□ -1.09
CTDNEP1-205ENST00000570828 MANBALQ9NQG1 85 aa8.26□□□□□ -1.09
CTDNEP1-205ENST00000570828 TRBV10-1A0A0K0K1A3 114 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms