RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 FAM3BP58499 235 aaPredicted RBP4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 DAZ2Q13117 558 aaKnown RBP4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 LGALS9BQ3B8N2 356 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 FAM74A4Q5TZK3 123 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 FAM222AQ5U5X8 452 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 ATRAIDQ6UW56 229 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 IL17DQ8TAD2 202 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 TRRAPQ9Y4A5 3859 aa4.73□□□□□ -1.65
CTDNEP1-204ENST00000570484 PLAC8L1A1L4L8 177 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 NXPH4O95158 308 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 NTF3P20783 257 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 CAMPP49913 170 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 FOXA3P55318 350 aaPredicted RBP4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 ZNF56Q15929 161 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 COX19Q49B96 90 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 PIK3CD-AS1Q5SR53 167 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 WDR73Q6P4I2 378 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 Q6ZTI0 123 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 OR4C5Q8NGB2 326 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 CNFNQ9BYD5 112 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 SCRT2Q9NQ03 307 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 DKK2Q9UBU2 259 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 U3KQK5 164 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 NOTCH3Q9UM47 2321 aa4.72□□□□□ -1.65
CTDNEP1-204ENST00000570484 TGIF2-C20orf24A0A0A6YYL0 155 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 TRAV4A0A0B4J268 109 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 F5H697 171 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 SCO1O75880 301 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 IGHV3-53P01767 116 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 HLA-DQA1P01909 254 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 MT-ND6P03923 174 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 RASL11AQ6T310 242 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 C11orf45Q8TAV5 145 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 RASL10AQ92737 203 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 FRZBQ92765 325 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 PTH2Q96A98 100 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 FAM210BQ96KR6 192 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 DPH3P1Q9H4G8 78 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 CELA1Q9UNI1 258 aa4.71□□□□□ -1.66
CTDNEP1-204ENST00000570484 TRBV24-1A0A075B6N3 115 aa4.7□□□□□ -1.66
CTDNEP1-204ENST00000570484 IGHV4-4A0A075B6R2 117 aa4.7□□□□□ -1.66
CTDNEP1-204ENST00000570484 A0A087WWL8 130 aa4.7□□□□□ -1.66
CTDNEP1-204ENST00000570484 TRGV4A0A0C4DH28 118 aa4.7□□□□□ -1.66
CTDNEP1-204ENST00000570484 H7C1H1 209 aa4.7□□□□□ -1.66
CTDNEP1-204ENST00000570484 CIDEAO60543 219 aa4.7□□□□□ -1.66
CTDNEP1-204ENST00000570484 ATP5G1P05496 136 aa4.7□□□□□ -1.66
CTDNEP1-204ENST00000570484 HTN3P15516 51 aa4.7□□□□□ -1.66
CTDNEP1-204ENST00000570484 ELOBQ15370 118 aa4.7□□□□□ -1.66
CTDNEP1-204ENST00000570484 C14orf178Q8N769 122 aaPredicted RBP4.7□□□□□ -1.66
CTDNEP1-204ENST00000570484 PKD1L1Q8TDX9 2849 aa4.7□□□□□ -1.66
CTDNEP1-204ENST00000570484 IGHV3-73A0A0B4J1V6 119 aa4.69□□□□□ -1.66
CTDNEP1-204ENST00000570484 A0A1B0GXF2 115 aa4.69□□□□□ -1.66
CTDNEP1-204ENST00000570484 RS1O15537 224 aa4.69□□□□□ -1.66
CTDNEP1-204ENST00000570484 EVI2AP22794 236 aa4.69□□□□□ -1.66
CTDNEP1-204ENST00000570484 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
CTDNEP1-204ENST00000570484 CFAP126Q5VTH2 177 aa4.69□□□□□ -1.66
CTDNEP1-204ENST00000570484 ZFP2Q6ZN57 461 aa4.69□□□□□ -1.66
CTDNEP1-204ENST00000570484 TMEM191AQ9H0A3 160 aa4.69□□□□□ -1.66
CTDNEP1-204ENST00000570484 MSRB1Q9NZV6 116 aa4.69□□□□□ -1.66
CTDNEP1-204ENST00000570484 F5H768 121 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 K7EQD1 137 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 APCSP02743 223 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 RAB5AP20339 215 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 RPS10P46783 165 aaKnown RBP4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 NANOS2P60321 138 aaKnown RBP4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 RHOHQ15669 191 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 Q6ZTC4 211 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 AMN1Q8IY45 258 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 LINC00612Q8N6U2 182 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 MRAP2Q96G30 205 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 ZNF479Q96JC4 524 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 C18orf15Q96N68 181 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 PRADC1Q9BSG0 188 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 GNB1LQ9BYB4 327 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 JPT2Q9H910 190 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 TRAPPC1Q9Y5R8 145 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 NOTCH1P46531 2555 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 SORL1Q92673 2214 aa4.68□□□□□ -1.66
CTDNEP1-204ENST00000570484 MEGF8Q7Z7M0 2845 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 DEFB131BA0A096LNP1 70 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 TRAV10A0A0B4J240 114 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 C9orf118A6NHY6 69 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 PPP1R17O96001 155 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 CKS2P33552 79 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 FABP9Q0Z7S8 132 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 SLAQ13239 276 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 C12orf74Q32Q52 190 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 FAM104BQ5XKR9 115 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 TMEM136Q6ZRR5 245 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 ZNF575Q86XF7 245 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 ORMDL3Q8N138 153 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 SAMD10Q9BYL1 202 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 PRO0255Q9UI72 69 aa4.67□□□□□ -1.66
CTDNEP1-204ENST00000570484 NBEAL1Q6ZS30 2694 aa4.66□□□□□ -1.66
CTDNEP1-204ENST00000570484 TRAV26-2A0A0B4J265 109 aa4.66□□□□□ -1.66
CTDNEP1-204ENST00000570484 TRBV6-4A0A1B0GX49 114 aa4.66□□□□□ -1.66
CTDNEP1-204ENST00000570484 D6R8Y8 96 aa4.66□□□□□ -1.66
CTDNEP1-204ENST00000570484 NCR2O95944 276 aa4.66□□□□□ -1.66
CTDNEP1-204ENST00000570484 PPBPP02775 128 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms