RNA–Protein interactions for RNA: ENST00000569963.1

NAE1-222, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-222ENST00000569963 PRADC1Q9BSG0 188 aa13.69□□□□□ -0.22
NAE1-222ENST00000569963 TPPP3Q9BW30 176 aa13.69□□□□□ -0.22
NAE1-222ENST00000569963 K7EQD1 137 aa13.68□□□□□ -0.22
NAE1-222ENST00000569963 GYPEP15421 78 aa13.68□□□□□ -0.22
NAE1-222ENST00000569963 RHOHQ15669 191 aa13.68□□□□□ -0.22
NAE1-222ENST00000569963 LYZL1Q6UWQ5 148 aa13.68□□□□□ -0.22
NAE1-222ENST00000569963 ISOC2Q96AB3 205 aa13.68□□□□□ -0.22
NAE1-222ENST00000569963 RYR2Q92736 4967 aa13.67□□□□□ -0.22
NAE1-222ENST00000569963 MUC21A0A0G2JKD1 596 aa13.67□□□□□ -0.22
NAE1-222ENST00000569963 MUC21A0A140T8X8 626 aa13.67□□□□□ -0.22
NAE1-222ENST00000569963 CTRLP40313 264 aa13.67□□□□□ -0.22
NAE1-222ENST00000569963 FOXA3P55318 350 aaPredicted RBP13.67□□□□□ -0.22
NAE1-222ENST00000569963 ESRGQ1W209 222 aa13.67□□□□□ -0.22
NAE1-222ENST00000569963 SH2D6Q7Z4S9 175 aa13.67□□□□□ -0.22
NAE1-222ENST00000569963 C15orf54Q8N8G6 183 aa13.67□□□□□ -0.22
NAE1-222ENST00000569963 CNFNQ9BYD5 112 aa13.67□□□□□ -0.22
NAE1-222ENST00000569963 A0A087WWL8 130 aa13.66□□□□□ -0.22
NAE1-222ENST00000569963 UQCC3Q6UW78 93 aa13.66□□□□□ -0.22
NAE1-222ENST00000569963 Q6ZSN1 163 aa13.66□□□□□ -0.22
NAE1-222ENST00000569963 NEGR1Q7Z3B1 354 aa13.66□□□□□ -0.22
NAE1-222ENST00000569963 LINC00588Q9Y4M8 146 aa13.66□□□□□ -0.22
NAE1-222ENST00000569963 RYR3Q15413 4870 aa13.65□□□□□ -0.22
NAE1-222ENST00000569963 FAM231BA6NCW3 169 aa13.65□□□□□ -0.22
NAE1-222ENST00000569963 SRIP30626 198 aa13.65□□□□□ -0.22
NAE1-222ENST00000569963 ADIRFQ15847 76 aa13.65□□□□□ -0.22
NAE1-222ENST00000569963 FAM74A4Q5TZK3 123 aa13.65□□□□□ -0.22
NAE1-222ENST00000569963 GTSF1Q8WW33 167 aa13.65□□□□□ -0.22
NAE1-222ENST00000569963 GFRA4Q9GZZ7 299 aa13.65□□□□□ -0.22
NAE1-222ENST00000569963 VPS13DQ5THJ4 4388 aa13.64□□□□□ -0.23
NAE1-222ENST00000569963 LOC100131303A0A0U1RQF7 123 aa13.64□□□□□ -0.23
NAE1-222ENST00000569963 RAB4BP61018 213 aa13.64□□□□□ -0.23
NAE1-222ENST00000569963 SSTP61278 116 aa13.64□□□□□ -0.23
NAE1-222ENST00000569963 TSKUQ8WUA8 353 aa13.64□□□□□ -0.23
NAE1-222ENST00000569963 AP1S3Q96PC3 154 aa13.64□□□□□ -0.23
NAE1-222ENST00000569963 KIF25-AS1Q9Y6Z4 181 aa13.64□□□□□ -0.23
NAE1-222ENST00000569963 HYDINQ4G0P3 5121 aa13.64□□□□□ -0.23
NAE1-222ENST00000569963 NTF3P20783 257 aa13.63□□□□□ -0.23
NAE1-222ENST00000569963 LYPD5Q6UWN5 251 aa13.63□□□□□ -0.23
NAE1-222ENST00000569963 OR10G8Q8NGN5 311 aa13.63□□□□□ -0.23
NAE1-222ENST00000569963 UPK3BQ9BT76 320 aa13.63□□□□□ -0.23
NAE1-222ENST00000569963 MSRB1Q9NZV6 116 aa13.63□□□□□ -0.23
NAE1-222ENST00000569963 MRPS16Q9Y3D3 137 aaKnown RBP13.63□□□□□ -0.23
NAE1-222ENST00000569963 V9GYV3 84 aa13.63□□□□□ -0.23
NAE1-222ENST00000569963 SMIM17P0DL12 118 aa13.62□□□□□ -0.23
NAE1-222ENST00000569963 C14orf178Q8N769 122 aaPredicted RBP13.62□□□□□ -0.23
NAE1-222ENST00000569963 ZNRF2Q8NHG8 242 aa13.62□□□□□ -0.23
NAE1-222ENST00000569963 TRGC1P0CF51 173 aa13.61□□□□□ -0.23
NAE1-222ENST00000569963 TRBV10-1A0A0K0K1A3 114 aa13.6□□□□□ -0.23
NAE1-222ENST00000569963 LINC00862A6NCI5 91 aa13.6□□□□□ -0.23
NAE1-222ENST00000569963 TIRAPP58753 221 aa13.6□□□□□ -0.23
NAE1-222ENST00000569963 LINC00315P59091 139 aa13.6□□□□□ -0.23
NAE1-222ENST00000569963 PNRC1Q12796 327 aaPredicted RBP13.6□□□□□ -0.23
NAE1-222ENST00000569963 KMT2AQ03164 3969 aa13.59□□□□□ -0.23
NAE1-222ENST00000569963 LINC00694P0DN24 101 aa13.59□□□□□ -0.23
NAE1-222ENST00000569963 TWIST1Q15672 202 aa13.59□□□□□ -0.23
NAE1-222ENST00000569963 PGLYRP4Q96LB8 373 aa13.59□□□□□ -0.23
NAE1-222ENST00000569963 HIGD1CA8MV81 97 aa13.58□□□□□ -0.24
NAE1-222ENST00000569963 ZNF56Q15929 161 aa13.58□□□□□ -0.24
NAE1-222ENST00000569963 TMEM218A2RU14 115 aa13.57□□□□□ -0.24
NAE1-222ENST00000569963 EVI2AP22794 236 aa13.57□□□□□ -0.24
NAE1-222ENST00000569963 COMMD7Q86VX2 200 aa13.57□□□□□ -0.24
NAE1-222ENST00000569963 ATP6V0E2Q8NHE4 81 aa13.57□□□□□ -0.24
NAE1-222ENST00000569963 BORCS7Q96B45 105 aa13.57□□□□□ -0.24
NAE1-222ENST00000569963 DPH3P1Q9H4G8 78 aa13.57□□□□□ -0.24
NAE1-222ENST00000569963 Q9H8V8 135 aa13.57□□□□□ -0.24
NAE1-222ENST00000569963 Q9UF83 564 aa13.57□□□□□ -0.24
NAE1-222ENST00000569963 GAGE12JA6NER3 117 aa13.56□□□□□ -0.24
NAE1-222ENST00000569963 F5H697 171 aa13.56□□□□□ -0.24
NAE1-222ENST00000569963 GAGE1Q13065 139 aa13.56□□□□□ -0.24
NAE1-222ENST00000569963 GAGE4Q13068 117 aa13.56□□□□□ -0.24
NAE1-222ENST00000569963 GAGE5Q13069 117 aa13.56□□□□□ -0.24
NAE1-222ENST00000569963 GAGE13Q4V321 117 aa13.56□□□□□ -0.24
NAE1-222ENST00000569963 NAT8BQ9UHF3 227 aa13.56□□□□□ -0.24
NAE1-222ENST00000569963 A0A1B0GUT8 65 aa13.55□□□□□ -0.24
NAE1-222ENST00000569963 SMIM27A0A1W2PRY6 76 aa13.55□□□□□ -0.24
NAE1-222ENST00000569963 PPP1R2P9O14990 202 aa13.55□□□□□ -0.24
NAE1-222ENST00000569963 RPL36AP83881 106 aaKnown RBP13.55□□□□□ -0.24
NAE1-222ENST00000569963 RPL36ALQ969Q0 106 aaKnown RBP13.55□□□□□ -0.24
NAE1-222ENST00000569963 GTSF1LQ9H1H1 148 aa13.55□□□□□ -0.24
NAE1-222ENST00000569963 TRBV7-3A0A075B6L6 115 aa13.54□□□□□ -0.24
NAE1-222ENST00000569963 Q6ZR54 194 aa13.54□□□□□ -0.24
NAE1-222ENST00000569963 SMIM15Q7Z3B0 74 aa13.54□□□□□ -0.24
NAE1-222ENST00000569963 NUP35Q8NFH5 326 aa13.54□□□□□ -0.24
NAE1-222ENST00000569963 IGLV2-18A0A075B6J9 118 aa13.53□□□□□ -0.24
NAE1-222ENST00000569963 H7C1H1 209 aa13.53□□□□□ -0.24
NAE1-222ENST00000569963 MGPP08493 103 aa13.53□□□□□ -0.24
NAE1-222ENST00000569963 DNAH6Q9C0G6 4158 aa13.53□□□□□ -0.24
NAE1-222ENST00000569963 F8W036 122 aa13.52□□□□□ -0.25
NAE1-222ENST00000569963 M0QY20 66 aa13.52□□□□□ -0.25
NAE1-222ENST00000569963 SIVA1O15304 175 aa13.52□□□□□ -0.25
NAE1-222ENST00000569963 ADCYAP1P18509 176 aa13.52□□□□□ -0.25
NAE1-222ENST00000569963 UBE2D3P61077 147 aa13.52□□□□□ -0.25
NAE1-222ENST00000569963 UBE2D2P62837 147 aa13.52□□□□□ -0.25
NAE1-222ENST00000569963 RIGQ13278 110 aa13.52□□□□□ -0.25
NAE1-222ENST00000569963 NEXN-AS1Q8NBZ9 246 aa13.52□□□□□ -0.25
NAE1-222ENST00000569963 ANAPC16Q96DE5 110 aa13.52□□□□□ -0.25
NAE1-222ENST00000569963 SEC11CQ9BY50 192 aa13.52□□□□□ -0.25
NAE1-222ENST00000569963 NBDYA0A0U1RRE5 68 aa13.51□□□□□ -0.25
NAE1-222ENST00000569963 MT-ND4LP03901 98 aa13.51□□□□□ -0.25
NAE1-222ENST00000569963 LELP1Q5T871 98 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 271 ms