RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 PIK3CD-AS1Q5SR53 167 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 Q6ZN92 141 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 C18orf65Q6ZTR6 163 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 ATOH7Q8N100 152 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 C14orf178Q8N769 122 aaPredicted RBP3.98□□□□□ -1.77
SF3B3-213ENST00000569687 RASL10AQ92737 203 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 DLX4Q92988 240 aaPredicted RBP3.98□□□□□ -1.77
SF3B3-213ENST00000569687 AP1S3Q96PC3 154 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 DUX5Q96PT3 197 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 ESM1Q9NQ30 184 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 GOLT1BQ9Y3E0 138 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 HLA-DRB4X5D2U9 266 aa3.98□□□□□ -1.77
SF3B3-213ENST00000569687 FASNP49327 2511 aaKnown RBP3.98□□□□□ -1.77
SF3B3-213ENST00000569687 TRBV6-5A0A0K0K1A5 114 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 A0A1B0GV90 55 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 A0A1W2PRX2 142 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 hDV102S1A0JD36 115 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 VCYO14598 125 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 SIVA1O15304 175 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 NDUFA7O95182 113 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 COX8AP10176 69 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 TFPI2P48307 235 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 HNRNPA3P51991 378 aaKnown RBP3.97□□□□□ -1.77
SF3B3-213ENST00000569687 POLR2KP53803 58 aaKnown RBP3.97□□□□□ -1.77
SF3B3-213ENST00000569687 CMC4P56277 68 aaPredicted RBP3.97□□□□□ -1.77
SF3B3-213ENST00000569687 COL5A1-AS1Q5SY13 56 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 SLC25A34Q6PIV7 304 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 C11orf44Q8N8P7 122 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 SYT8Q8NBV8 401 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 TMEM158Q8WZ71 300 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 SPAG8Q99932 426 aaPredicted RBP3.97□□□□□ -1.77
SF3B3-213ENST00000569687 SMR3AQ99954 134 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 SMIM2Q9BVW6 85 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 EDA2RQ9HAV5 297 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 ZMAT5Q9UDW3 170 aaKnown RBP3.97□□□□□ -1.77
SF3B3-213ENST00000569687 HHLA3Q9XRX5 114 aa3.97□□□□□ -1.77
SF3B3-213ENST00000569687 ZNF256Q9Y2P7 627 aaPredicted RBP3.97□□□□□ -1.77
SF3B3-213ENST00000569687 FLNAP21333 2647 aaKnown RBP3.96□□□□□ -1.77
SF3B3-213ENST00000569687 TRGV11A0A075B6L2 103 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 TRAV12-1A0A0B4J245 112 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 TRAV26-2A0A0B4J265 109 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 CCL24O00175 119 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 LY6G6DO95868 133 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 CRYGDP07320 174 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 PRSS1P07477 247 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 CD7P09564 240 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 DEFB131AP59861 70 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 DEFB136Q30KP8 78 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 TMEM61Q8N0U2 210 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 KLHL30-AS1Q8NEE0 82 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 LINC01006Q8NI28 216 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 TOMM6Q96B49 74 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 MCRIP2Q9BUT9 160 aaKnown RBP3.96□□□□□ -1.78
SF3B3-213ENST00000569687 MDFICQ9P1T7 246 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 TIMM8BQ9Y5J9 83 aaPredicted RBP3.96□□□□□ -1.78
SF3B3-213ENST00000569687 TSSC4Q9Y5U2 329 aaPredicted RBP3.96□□□□□ -1.78
SF3B3-213ENST00000569687 SELENOKQ9Y6D0 94 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 CCDC168Q8NDH2 2452 aa3.96□□□□□ -1.78
SF3B3-213ENST00000569687 A0A087WX48 190 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 TRBV27A0A0K0K1C4 114 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 RBMY1BA6NDE4 496 aaKnown RBP3.95□□□□□ -1.78
SF3B3-213ENST00000569687 RBMY1EA6NEQ0 496 aaKnown RBP3.95□□□□□ -1.78
SF3B3-213ENST00000569687 KNCNA6PVL3 124 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 M0QY20 66 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 SPRY2O43597 315 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 NUDT3O95989 172 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 RBMY1DP0C7P1 496 aaKnown RBP3.95□□□□□ -1.78
SF3B3-213ENST00000569687 CD28P10747 220 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 FGF6P10767 208 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 GCSHP23434 173 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 FXYD7P58549 80 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 HILS1P60008 231 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 SPINK13Q1W4C9 94 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 SUMO4Q6EEV6 95 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 BOD1L2Q8IYS8 172 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 STPG4Q8N801 248 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 DYNLRB2Q8TF09 96 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 ZNF418Q8TF45 676 aaPredicted RBP3.95□□□□□ -1.78
SF3B3-213ENST00000569687 FAM110AQ9BQ89 295 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 CSTL1Q9H114 145 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 MAP6D1Q9H9H5 199 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 DKK2Q9UBU2 259 aa3.95□□□□□ -1.78
SF3B3-213ENST00000569687 TRAV12-2A0A075B6T6 113 aa3.94□□□□□ -1.78
SF3B3-213ENST00000569687 INAFM1C9JVW0 142 aa3.94□□□□□ -1.78
SF3B3-213ENST00000569687 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.94□□□□□ -1.78
SF3B3-213ENST00000569687 H7C1H1 209 aa3.94□□□□□ -1.78
SF3B3-213ENST00000569687 TCAPO15273 167 aa3.94□□□□□ -1.78
SF3B3-213ENST00000569687 DPM2O94777 84 aa3.94□□□□□ -1.78
SF3B3-213ENST00000569687 IGKV3-20P01619 116 aa3.94□□□□□ -1.78
SF3B3-213ENST00000569687 IGKCP01834 107 aa3.94□□□□□ -1.78
SF3B3-213ENST00000569687 RIPPLY3P57055 190 aa3.94□□□□□ -1.78
SF3B3-213ENST00000569687 GAGE1Q13065 139 aa3.94□□□□□ -1.78
SF3B3-213ENST00000569687 BEAN1Q3B7T3 259 aa3.94□□□□□ -1.78
SF3B3-213ENST00000569687 CD300EQ496F6 205 aaPredicted RBP3.94□□□□□ -1.78
SF3B3-213ENST00000569687 C12orf54Q6X4T0 127 aa3.94□□□□□ -1.78
SF3B3-213ENST00000569687 ERASQ7Z444 233 aa3.94□□□□□ -1.78
SF3B3-213ENST00000569687 NEXN-AS1Q8NBZ9 246 aa3.94□□□□□ -1.78
SF3B3-213ENST00000569687 RPL39LQ96EH5 51 aaKnown RBP3.94□□□□□ -1.78
SF3B3-213ENST00000569687 TMEM141Q96I45 108 aa3.94□□□□□ -1.78
SF3B3-213ENST00000569687 DUX3Q96PT4 197 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms