RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 TIRAPP58753 221 aa9.45□□□□□ -0.9
HERPUD1-218ENST00000569569 Q6ZSN1 163 aa9.45□□□□□ -0.9
HERPUD1-218ENST00000569569 KRTAP1-5Q9BYS1 174 aa9.45□□□□□ -0.9
HERPUD1-218ENST00000569569 TRBV20OR9-2A0A075B6H5 130 aa9.44□□□□□ -0.9
HERPUD1-218ENST00000569569 A0A1B0GVY2 172 aa9.44□□□□□ -0.9
HERPUD1-218ENST00000569569 C19orf71A6NCJ1 209 aa9.44□□□□□ -0.9
HERPUD1-218ENST00000569569 A6NJY4 79 aa9.44□□□□□ -0.9
HERPUD1-218ENST00000569569 CRYGDP07320 174 aa9.44□□□□□ -0.9
HERPUD1-218ENST00000569569 OR5AL1P0C617 328 aa9.44□□□□□ -0.9
HERPUD1-218ENST00000569569 FAM74A4Q5TZK3 123 aa9.44□□□□□ -0.9
HERPUD1-218ENST00000569569 TRAV9-2A0A087WT02 112 aa9.43□□□□□ -0.9
HERPUD1-218ENST00000569569 A0A087WWL8 130 aa9.43□□□□□ -0.9
HERPUD1-218ENST00000569569 TMEM250H0YL14 139 aa9.43□□□□□ -0.9
HERPUD1-218ENST00000569569 RPS20P60866 119 aaKnown RBP9.43□□□□□ -0.9
HERPUD1-218ENST00000569569 SPANXN1Q5VSR9 72 aa9.43□□□□□ -0.9
HERPUD1-218ENST00000569569 OR10AG1Q8NH19 301 aa9.43□□□□□ -0.9
HERPUD1-218ENST00000569569 ATP6V0E2Q8NHE4 81 aa9.43□□□□□ -0.9
HERPUD1-218ENST00000569569 LY96Q9Y6Y9 160 aa9.43□□□□□ -0.9
HERPUD1-218ENST00000569569 HECTD4Q9Y4D8 3996 aa9.43□□□□□ -0.9
HERPUD1-218ENST00000569569 XKRY2A2RUG3 117 aa9.42□□□□□ -0.9
HERPUD1-218ENST00000569569 K7EP13 123 aa9.42□□□□□ -0.9
HERPUD1-218ENST00000569569 P01737 135 aa9.42□□□□□ -0.9
HERPUD1-218ENST00000569569 WFDC10BQ8IUB3 73 aa9.42□□□□□ -0.9
HERPUD1-218ENST00000569569 C14orf178Q8N769 122 aaPredicted RBP9.42□□□□□ -0.9
HERPUD1-218ENST00000569569 OR2D3Q8NGH3 330 aa9.42□□□□□ -0.9
HERPUD1-218ENST00000569569 GTSF1LQ9H1H1 148 aa9.42□□□□□ -0.9
HERPUD1-218ENST00000569569 PKD1P98161 4303 aa9.41□□□□□ -0.9
HERPUD1-218ENST00000569569 GAGE12JA6NER3 117 aa9.41□□□□□ -0.9
HERPUD1-218ENST00000569569 NDUFS6O75380 124 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-218ENST00000569569 EVI2AP22794 236 aa9.41□□□□□ -0.9
HERPUD1-218ENST00000569569 GAGE1Q13065 139 aa9.41□□□□□ -0.9
HERPUD1-218ENST00000569569 GAGE4Q13068 117 aa9.41□□□□□ -0.9
HERPUD1-218ENST00000569569 GAGE5Q13069 117 aa9.41□□□□□ -0.9
HERPUD1-218ENST00000569569 GAGE13Q4V321 117 aa9.41□□□□□ -0.9
HERPUD1-218ENST00000569569 OCC1Q8TAD7 63 aa9.41□□□□□ -0.9
HERPUD1-218ENST00000569569 EIF5A2Q9GZV4 153 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-218ENST00000569569 TRAV8-6A0A0B4J262 113 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 MUC21A0A0G2JKD1 596 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 MUC21A0A140T8X8 626 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 DNAH10OSP0CZ25 163 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 LINC00694P0DN24 101 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 GZMBP10144 247 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 TNP2Q05952 138 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 OR10J3Q5JRS4 329 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 TOR2AQ5JU69 321 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 LELP1Q5T871 98 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 FER1L6-AS1Q8NA97 138 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 NUDT10Q8NFP7 164 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 NUDT11Q96G61 164 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 FAM210AQ96ND0 272 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 Q9UF83 564 aa9.4□□□□□ -0.9
HERPUD1-218ENST00000569569 IGHV3-38A0A0C4DH36 116 aa9.39□□□□□ -0.91
HERPUD1-218ENST00000569569 TRBV10-1A0A0K0K1A3 114 aa9.39□□□□□ -0.91
HERPUD1-218ENST00000569569 IGLC6P0CF74 106 aa9.39□□□□□ -0.91
HERPUD1-218ENST00000569569 LINC00315P59091 139 aa9.39□□□□□ -0.91
HERPUD1-218ENST00000569569 RAB4BP61018 213 aa9.39□□□□□ -0.91
HERPUD1-218ENST00000569569 SSTP61278 116 aa9.39□□□□□ -0.91
HERPUD1-218ENST00000569569 TEX261Q6UWH6 196 aa9.39□□□□□ -0.91
HERPUD1-218ENST00000569569 TPPP3Q9BW30 176 aa9.39□□□□□ -0.91
HERPUD1-218ENST00000569569 F2Z2F3 143 aa9.38□□□□□ -0.91
HERPUD1-218ENST00000569569 K7EN84 100 aa9.38□□□□□ -0.91
HERPUD1-218ENST00000569569 SMIM17P0DL12 118 aa9.38□□□□□ -0.91
HERPUD1-218ENST00000569569 CACNG7P62955 275 aa9.38□□□□□ -0.91
HERPUD1-218ENST00000569569 C10orf126Q8N4M7 172 aa9.38□□□□□ -0.91
HERPUD1-218ENST00000569569 CEBPGP53567 150 aa9.37□□□□□ -0.91
HERPUD1-218ENST00000569569 RPL36AP83881 106 aaKnown RBP9.37□□□□□ -0.91
HERPUD1-218ENST00000569569 ZNF56Q15929 161 aa9.37□□□□□ -0.91
HERPUD1-218ENST00000569569 LINC01556Q5JQF7 62 aa9.37□□□□□ -0.91
HERPUD1-218ENST00000569569 NFE4Q86UQ8 179 aa9.37□□□□□ -0.91
HERPUD1-218ENST00000569569 RPL36ALQ969Q0 106 aaKnown RBP9.37□□□□□ -0.91
HERPUD1-218ENST00000569569 AP1S3Q96PC3 154 aa9.37□□□□□ -0.91
HERPUD1-218ENST00000569569 RNASE7Q9H1E1 156 aaKnown RBP9.37□□□□□ -0.91
HERPUD1-218ENST00000569569 TRBV7-3A0A075B6L6 115 aa9.36□□□□□ -0.91
HERPUD1-218ENST00000569569 A0A087WWC5 75 aa9.36□□□□□ -0.91
HERPUD1-218ENST00000569569 SRP19P09132 144 aaKnown RBP9.36□□□□□ -0.91
HERPUD1-218ENST00000569569 LYZL1Q6UWQ5 148 aa9.36□□□□□ -0.91
HERPUD1-218ENST00000569569 RPP21Q9H633 154 aaKnown RBP9.36□□□□□ -0.91
HERPUD1-218ENST00000569569 TNFRSF18Q9Y5U5 241 aa9.36□□□□□ -0.91
HERPUD1-218ENST00000569569 KIF25-AS1Q9Y6Z4 181 aa9.36□□□□□ -0.91
HERPUD1-218ENST00000569569 F5H697 171 aa9.35□□□□□ -0.91
HERPUD1-218ENST00000569569 WDR73Q6P4I2 378 aa9.35□□□□□ -0.91
HERPUD1-218ENST00000569569 Q6ZRN7 208 aaPredicted RBP9.35□□□□□ -0.91
HERPUD1-218ENST00000569569 FAM231DQ6ZW35 169 aa9.35□□□□□ -0.91
HERPUD1-218ENST00000569569 OR10G8Q8NGN5 311 aa9.35□□□□□ -0.91
HERPUD1-218ENST00000569569 SMIM7Q9BQ49 75 aa9.35□□□□□ -0.91
HERPUD1-218ENST00000569569 MSRB1Q9NZV6 116 aa9.35□□□□□ -0.91
HERPUD1-218ENST00000569569 PKHD1P08F94 4074 aa9.35□□□□□ -0.91
HERPUD1-218ENST00000569569 ZNF727A8MUV8 499 aa9.34□□□□□ -0.91
HERPUD1-218ENST00000569569 GATCO43716 136 aaKnown RBP9.34□□□□□ -0.91
HERPUD1-218ENST00000569569 UBE2D3P61077 147 aa9.34□□□□□ -0.91
HERPUD1-218ENST00000569569 UBE2D2P62837 147 aa9.34□□□□□ -0.91
HERPUD1-218ENST00000569569 NEXN-AS1Q8NBZ9 246 aa9.34□□□□□ -0.91
HERPUD1-218ENST00000569569 IGHV3-30P01768 117 aa9.33□□□□□ -0.92
HERPUD1-218ENST00000569569 IGHV3-33P01772 117 aa9.33□□□□□ -0.92
HERPUD1-218ENST00000569569 TRGC1P0CF51 173 aa9.33□□□□□ -0.92
HERPUD1-218ENST00000569569 IGHV3-30-3P0DP02 117 aa9.33□□□□□ -0.92
HERPUD1-218ENST00000569569 IGHV3-30-5P0DP03 117 aa9.33□□□□□ -0.92
HERPUD1-218ENST00000569569 NTF3P20783 257 aa9.33□□□□□ -0.92
HERPUD1-218ENST00000569569 ERVFC1-1P60608 527 aa9.33□□□□□ -0.92
HERPUD1-218ENST00000569569 DNAH11Q96DT5 4516 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms