RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	OR1L4	Q8NGR5	311 aa		3.6	□□□□□ -1.83
BBS4-218	ENST00000569440	RPP21	Q9H633	154 aa	Known RBP	3.6	□□□□□ -1.83
BBS4-218	ENST00000569440	JPT2	Q9H910	190 aa		3.6	□□□□□ -1.83
BBS4-218	ENST00000569440	GPN1	Q9HCN4	374 aa	Predicted RBP	3.6	□□□□□ -1.83
BBS4-218	ENST00000569440	CCDC59	Q9P031	241 aa	Known RBP	3.6	□□□□□ -1.83
BBS4-218	ENST00000569440	COMMD3	Q9UBI1	195 aa		3.6	□□□□□ -1.83
BBS4-218	ENST00000569440	TRBV7-3	A0A075B6L6	115 aa		3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	TRBV10-1	A0A0K0K1A3	114 aa		3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	PTTG1	O95997	202 aa		3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	APOA1	P02647	267 aa		3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	AMT	P48728	403 aa		3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	TAS2R19	P59542	299 aa		3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	CYCS	P99999	105 aa	Known RBP	3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	HIGD2B	Q4VC39	106 aa		3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	TMEM14EP	Q6UXP3	125 aa		3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	OR10G8	Q8NGN5	311 aa		3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	TVP23C	Q96ET8	276 aa		3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	CHCHD5	Q9BSY4	110 aa		3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	MIXL1	Q9H2W2	232 aa		3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	PSENEN	Q9NZ42	101 aa		3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	PKIG	Q9Y2B9	76 aa		3.59	□□□□□ -1.83
BBS4-218	ENST00000569440	TRAV6	A0A075B6T7	132 aa		3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	GVQW2	A0A096LPI5	108 aa	Predicted RBP	3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	PIGBOS1	A0A0B4J2F0	54 aa		3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	LOC100506127	A0A0U1RQW1	187 aa		3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	NBEAP1	P0C6P0	100 aa		3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	RAB5C	P51148	216 aa		3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	RPL36A	P83881	106 aa	Known RBP	3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	ARL16	Q0P5N6	197 aa		3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	MIC13	Q5XKP0	118 aa		3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	PRR27	Q6MZM9	219 aa		3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	FAAP20	Q6NZ36	180 aa		3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	NTM-AS1	Q6ZSK4	140 aa		3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	SMIM8	Q96KF7	97 aa		3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	PFDN5	Q99471	154 aa		3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	GGACT	Q9BVM4	153 aa		3.58	□□□□□ -1.84
BBS4-218	ENST00000569440	RABL2B	Q9UNT1	228 aa		3.58	□□□□□ -1.84
BBS4-218	ENST00000569440		F6UZH7	168 aa		3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	METTL15P1	P0C7V9	234 aa		3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	ANXA3	P12429	323 aa		3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	CSN1S1	P47710	185 aa		3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	CAMLG	P49069	296 aa		3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	RAB2A	P61019	212 aa		3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	LGALSL	Q3ZCW2	172 aa	Predicted RBP	3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	PHF5A	Q7RTV0	110 aa	Known RBP	3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	NRARP	Q7Z6K4	114 aa		3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	KRTAP11-1	Q8IUC1	163 aa		3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	C20orf203	Q8NBC4	194 aa		3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	DYNC2LI1	Q8TCX1	351 aa		3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	DIRAS2	Q96HU8	199 aa		3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	FAM167A-AS1	Q96KT0	104 aa		3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	SLC25A2	Q9BXI2	301 aa		3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	RBM38	Q9H0Z9	239 aa	Known RBP	3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	PPDPF	Q9H3Y8	114 aa		3.57	□□□□□ -1.84
BBS4-218	ENST00000569440	DISC1	C4P0D8	188 aa		3.56	□□□□□ -1.84
BBS4-218	ENST00000569440	TGFBR1	P36897	503 aa		3.56	□□□□□ -1.84
BBS4-218	ENST00000569440	RPL29	P47914	159 aa	Known RBP	3.56	□□□□□ -1.84
BBS4-218	ENST00000569440	ZNF80	P51504	273 aa	Predicted RBP	3.56	□□□□□ -1.84
BBS4-218	ENST00000569440	SEC61B	P60468	96 aa	Known RBP	3.56	□□□□□ -1.84
BBS4-218	ENST00000569440	S100A10	P60903	97 aa		3.56	□□□□□ -1.84
BBS4-218	ENST00000569440	GAGE6	Q13070	117 aa		3.56	□□□□□ -1.84
BBS4-218	ENST00000569440	C9orf116	Q5BN46	136 aa	Predicted RBP	3.56	□□□□□ -1.84
BBS4-218	ENST00000569440	MITD1	Q8WV92	249 aa		3.56	□□□□□ -1.84
BBS4-218	ENST00000569440	FXYD5	Q96DB9	178 aa		3.56	□□□□□ -1.84
BBS4-218	ENST00000569440	PHYHIPL	Q96FC7	376 aa		3.56	□□□□□ -1.84
BBS4-218	ENST00000569440	SLIRP	Q9GZT3	109 aa	Known RBP	3.56	□□□□□ -1.84
BBS4-218	ENST00000569440	TREM1	Q9NP99	234 aa		3.56	□□□□□ -1.84
BBS4-218	ENST00000569440		A0A087WZ39	114 aa		3.55	□□□□□ -1.84
BBS4-218	ENST00000569440		A0A087X002	238 aa		3.55	□□□□□ -1.84
BBS4-218	ENST00000569440	PRSS47	A8MTI9	375 aa		3.55	□□□□□ -1.84
BBS4-218	ENST00000569440	EIF3G	O75821	320 aa	Known RBP eCLIP	3.55	□□□□□ -1.84
BBS4-218	ENST00000569440	RAN	P62826	216 aa	Known RBP	3.55	□□□□□ -1.84
BBS4-218	ENST00000569440	EIF5A	P63241	154 aa	Known RBP	3.55	□□□□□ -1.84
BBS4-218	ENST00000569440	LINC00173	Q6ZV60	143 aa		3.55	□□□□□ -1.84
BBS4-218	ENST00000569440	SCGB3A2	Q96PL1	93 aa		3.55	□□□□□ -1.84
BBS4-218	ENST00000569440	PRRT1	Q99946	306 aa		3.55	□□□□□ -1.84
BBS4-218	ENST00000569440	RABL2A	Q9UBK7	228 aa	Predicted RBP	3.55	□□□□□ -1.84
BBS4-218	ENST00000569440	IGLV4-60	A0A075B6I1	120 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440		A0A1B0GUV1	79 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	HPGDS	O60760	199 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	CAMP	P49913	170 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	TAS2R30	P59541	319 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	SSBP1	Q04837	148 aa	Known RBP	3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	GAGE2B	Q13066	116 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	KRTAP6-3	Q3LI67	103 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	TMEM97	Q5BJF2	176 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	GCSAML	Q5JQS6	135 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	FAM74A4	Q5TZK3	123 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	NEXN-AS1	Q8NBZ9	246 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	TYMSOS	Q8TAI1	123 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	SFRP2	Q96HF1	295 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	VCX	Q9H320	206 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	BLOC1S6	Q9UL45	172 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	WDR83OS	Q9Y284	106 aa		3.54	□□□□□ -1.84
BBS4-218	ENST00000569440	IGKV3D-20	A0A0C4DH25	116 aa		3.53	□□□□□ -1.84
BBS4-218	ENST00000569440	SSSCA1	O60232	199 aa		3.53	□□□□□ -1.84
BBS4-218	ENST00000569440	TSC22D2	O75157	780 aa		3.53	□□□□□ -1.84
BBS4-218	ENST00000569440	AQP4	P55087	323 aa		3.53	□□□□□ -1.84
BBS4-218	ENST00000569440	CTAG1A	P78358	180 aa		3.53	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms