RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 FAM231AP0DMU4 169 aa9.12□□□□□ -0.95
CNOT1-217ENST00000569263 FAM231CP0DMU5 169 aa9.12□□□□□ -0.95
CNOT1-217ENST00000569263 RHOHQ15669 191 aa9.12□□□□□ -0.95
CNOT1-217ENST00000569263 UBE2DNLQ8IWF7 75 aa9.12□□□□□ -0.95
CNOT1-217ENST00000569263 TSKUQ8WUA8 353 aa9.12□□□□□ -0.95
CNOT1-217ENST00000569263 GTSF1Q8WW33 167 aa9.12□□□□□ -0.95
CNOT1-217ENST00000569263 LINC00476Q8WZB0 136 aa9.12□□□□□ -0.95
CNOT1-217ENST00000569263 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
CNOT1-217ENST00000569263 SAMD10Q9BYL1 202 aa9.12□□□□□ -0.95
CNOT1-217ENST00000569263 GFRA4Q9GZZ7 299 aa9.12□□□□□ -0.95
CNOT1-217ENST00000569263 LCE6AA0A183 80 aa9.11□□□□□ -0.95
CNOT1-217ENST00000569263 HIGD1CA8MV81 97 aa9.11□□□□□ -0.95
CNOT1-217ENST00000569263 TRGC1P0CF51 173 aa9.11□□□□□ -0.95
CNOT1-217ENST00000569263 GYPEP15421 78 aa9.11□□□□□ -0.95
CNOT1-217ENST00000569263 TWIST1Q15672 202 aa9.11□□□□□ -0.95
CNOT1-217ENST00000569263 C14orf178Q8N769 122 aaPredicted RBP9.11□□□□□ -0.95
CNOT1-217ENST00000569263 PRADC1Q9BSG0 188 aa9.11□□□□□ -0.95
CNOT1-217ENST00000569263 PLECQ15149 4684 aaKnown RBP9.11□□□□□ -0.95
CNOT1-217ENST00000569263 A0A096LPF7 62 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 TRBV6-4A0A1B0GX49 114 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 FAM231BA6NCW3 169 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 K7EQD1 137 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 CRYGDP07320 174 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 ADCYAP1P18509 176 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 NTF3P20783 257 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 SRIP30626 198 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 ZNF56Q15929 161 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 MRPL23Q16540 153 aaKnown RBP9.1□□□□□ -0.95
CNOT1-217ENST00000569263 LGALS9CQ6DKI2 356 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 UFSP1Q6NVU6 142 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 WDR73Q6P4I2 378 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 SLC25A29Q8N8R3 303 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 SEC11CQ9BY50 192 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 CNFNQ9BYD5 112 aa9.1□□□□□ -0.95
CNOT1-217ENST00000569263 F5H697 171 aa9.09□□□□□ -0.95
CNOT1-217ENST00000569263 PPP1R2P9O14990 202 aa9.09□□□□□ -0.95
CNOT1-217ENST00000569263 MGPP08493 103 aa9.09□□□□□ -0.95
CNOT1-217ENST00000569263 SMIM15Q7Z3B0 74 aa9.09□□□□□ -0.95
CNOT1-217ENST00000569263 MSRB1Q9NZV6 116 aa9.09□□□□□ -0.95
CNOT1-217ENST00000569263 NAT8BQ9UHF3 227 aa9.09□□□□□ -0.95
CNOT1-217ENST00000569263 ALMS1Q8TCU4 4167 aa9.09□□□□□ -0.96
CNOT1-217ENST00000569263 LOC100131303A0A0U1RQF7 123 aa9.08□□□□□ -0.96
CNOT1-217ENST00000569263 A0A1B0GUT8 65 aa9.08□□□□□ -0.96
CNOT1-217ENST00000569263 MT-ND4LP03901 98 aa9.08□□□□□ -0.96
CNOT1-217ENST00000569263 FOXA3P55318 350 aaPredicted RBP9.08□□□□□ -0.96
CNOT1-217ENST00000569263 CCL18P55774 89 aa9.08□□□□□ -0.96
CNOT1-217ENST00000569263 RNF212Q495C1 297 aa9.08□□□□□ -0.96
CNOT1-217ENST00000569263 Q6ZSN1 163 aa9.08□□□□□ -0.96
CNOT1-217ENST00000569263 SMIM27A0A1W2PRY6 76 aa9.07□□□□□ -0.96
CNOT1-217ENST00000569263 EVI2AP22794 236 aa9.07□□□□□ -0.96
CNOT1-217ENST00000569263 RAB4BP61018 213 aa9.07□□□□□ -0.96
CNOT1-217ENST00000569263 NEGR1Q7Z3B1 354 aa9.07□□□□□ -0.96
CNOT1-217ENST00000569263 NUP35Q8NFH5 326 aa9.07□□□□□ -0.96
CNOT1-217ENST00000569263 ANAPC16Q96DE5 110 aa9.07□□□□□ -0.96
CNOT1-217ENST00000569263 DPH3P1Q9H4G8 78 aa9.07□□□□□ -0.96
CNOT1-217ENST00000569263 RIGQ13278 110 aa9.06□□□□□ -0.96
CNOT1-217ENST00000569263 SH2D6Q7Z4S9 175 aa9.06□□□□□ -0.96
CNOT1-217ENST00000569263 KIF25-AS1Q9Y6Z4 181 aa9.06□□□□□ -0.96
CNOT1-217ENST00000569263 GAGE12JA6NER3 117 aa9.05□□□□□ -0.96
CNOT1-217ENST00000569263 GAGE1Q13065 139 aa9.05□□□□□ -0.96
CNOT1-217ENST00000569263 GAGE4Q13068 117 aa9.05□□□□□ -0.96
CNOT1-217ENST00000569263 GAGE5Q13069 117 aa9.05□□□□□ -0.96
CNOT1-217ENST00000569263 GAGE13Q4V321 117 aa9.05□□□□□ -0.96
CNOT1-217ENST00000569263 LYSTQ99698 3801 aa9.04□□□□□ -0.96
CNOT1-217ENST00000569263 TRBV10-1A0A0K0K1A3 114 aa9.04□□□□□ -0.96
CNOT1-217ENST00000569263 H7C1H1 209 aa9.04□□□□□ -0.96
CNOT1-217ENST00000569263 RPL36AP83881 106 aaKnown RBP9.04□□□□□ -0.96
CNOT1-217ENST00000569263 NDUFA5Q16718 116 aa9.04□□□□□ -0.96
CNOT1-217ENST00000569263 ESRGQ1W209 222 aa9.04□□□□□ -0.96
CNOT1-217ENST00000569263 RPL36ALQ969Q0 106 aaKnown RBP9.04□□□□□ -0.96
CNOT1-217ENST00000569263 CARHSP1Q9Y2V2 147 aaKnown RBP9.04□□□□□ -0.96
CNOT1-217ENST00000569263 LINC00588Q9Y4M8 146 aa9.04□□□□□ -0.96
CNOT1-217ENST00000569263 FAM3BP58499 235 aaPredicted RBP9.03□□□□□ -0.96
CNOT1-217ENST00000569263 LINC00315P59091 139 aa9.03□□□□□ -0.96
CNOT1-217ENST00000569263 C10orf91Q5T1B1 145 aa9.03□□□□□ -0.96
CNOT1-217ENST00000569263 SUMO4Q6EEV6 95 aa9.03□□□□□ -0.96
CNOT1-217ENST00000569263 MRPL54Q6P161 138 aaKnown RBP9.02□□□□□ -0.97
CNOT1-217ENST00000569263 LYPD5Q6UWN5 251 aa9.02□□□□□ -0.97
CNOT1-217ENST00000569263 ATP6V0E2Q8NHE4 81 aa9.02□□□□□ -0.97
CNOT1-217ENST00000569263 ZNRF2Q8NHG8 242 aa9.02□□□□□ -0.97
CNOT1-217ENST00000569263 CTDSP1Q9GZU7 261 aa9.02□□□□□ -0.97
CNOT1-217ENST00000569263 TMEM191AQ9H0A3 160 aa9.02□□□□□ -0.97
CNOT1-217ENST00000569263 MRPS16Q9Y3D3 137 aaKnown RBP9.02□□□□□ -0.97
CNOT1-217ENST00000569263 TRBV7-3A0A075B6L6 115 aa9.01□□□□□ -0.97
CNOT1-217ENST00000569263 A0A1B0GW15 77 aa9.01□□□□□ -0.97
CNOT1-217ENST00000569263 APOC3P02656 99 aa9.01□□□□□ -0.97
CNOT1-217ENST00000569263 S100A8P05109 93 aa9.01□□□□□ -0.97
CNOT1-217ENST00000569263 LINC00694P0DN24 101 aa9.01□□□□□ -0.97
CNOT1-217ENST00000569263 CAMPP49913 170 aa9.01□□□□□ -0.97
CNOT1-217ENST00000569263 RASL11AQ6T310 242 aa9.01□□□□□ -0.97
CNOT1-217ENST00000569263 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.01□□□□□ -0.97
CNOT1-217ENST00000569263 NEXN-AS1Q8NBZ9 246 aa9.01□□□□□ -0.97
CNOT1-217ENST00000569263 Q9UF83 564 aa9.01□□□□□ -0.97
CNOT1-217ENST00000569263 DNAH1Q9P2D7 4330 aa9□□□□□ -0.97
CNOT1-217ENST00000569263 M0QY20 66 aa9□□□□□ -0.97
CNOT1-217ENST00000569263 HBBP68871 147 aa9□□□□□ -0.97
CNOT1-217ENST00000569263 RHEBQ15382 184 aa9□□□□□ -0.97
CNOT1-217ENST00000569263 KCNIP4Q6PIL6 250 aa9□□□□□ -0.97
CNOT1-217ENST00000569263 ATP5L2Q7Z4Y8 100 aa9□□□□□ -0.97
CNOT1-217ENST00000569263 CLRN3Q8NCR9 226 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms