RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 BIRC6Q9NR09 4857 aa10.19□□□□□ -0.78
COMMD4-225ENST00000569245 NUDT3O95989 172 aa10.18□□□□□ -0.78
COMMD4-225ENST00000569245 ZNF415Q09FC8 603 aa10.18□□□□□ -0.78
COMMD4-225ENST00000569245 ATP5L2Q7Z4Y8 100 aa10.18□□□□□ -0.78
COMMD4-225ENST00000569245 C15orf53Q8NAA6 179 aa10.18□□□□□ -0.78
COMMD4-225ENST00000569245 GSN-AS1Q9NRJ2 163 aa10.18□□□□□ -0.78
COMMD4-225ENST00000569245 MUC4Q99102 2169 aa10.17□□□□□ -0.78
COMMD4-225ENST00000569245 A0A1B0GUT8 65 aa10.17□□□□□ -0.78
COMMD4-225ENST00000569245 CACNG7P62955 275 aa10.17□□□□□ -0.78
COMMD4-225ENST00000569245 BORCS7Q96B45 105 aa10.17□□□□□ -0.78
COMMD4-225ENST00000569245 TPPP3Q9BW30 176 aa10.17□□□□□ -0.78
COMMD4-225ENST00000569245 DNAH6Q9C0G6 4158 aa10.17□□□□□ -0.78
COMMD4-225ENST00000569245 TGIF2-C20orf24A0A0A6YYL0 155 aa10.16□□□□□ -0.78
COMMD4-225ENST00000569245 COLCA2A8K830 154 aa10.16□□□□□ -0.78
COMMD4-225ENST00000569245 M0R2N4 97 aa10.16□□□□□ -0.78
COMMD4-225ENST00000569245 DAZ2Q13117 558 aaKnown RBP10.16□□□□□ -0.78
COMMD4-225ENST00000569245 RIGQ13278 110 aa10.16□□□□□ -0.78
COMMD4-225ENST00000569245 OR10AG1Q8NH19 301 aa10.16□□□□□ -0.78
COMMD4-225ENST00000569245 PTH2Q96A98 100 aa10.16□□□□□ -0.78
COMMD4-225ENST00000569245 SPXQ9BT56 116 aa10.16□□□□□ -0.78
COMMD4-225ENST00000569245 PHLDA3Q9Y5J5 127 aa10.16□□□□□ -0.78
COMMD4-225ENST00000569245 DNAH10Q8IVF4 4471 aa10.15□□□□□ -0.78
COMMD4-225ENST00000569245 TRGV2A0A075B6R0 118 aa10.15□□□□□ -0.78
COMMD4-225ENST00000569245 TRGV1A0A0A0MS02 117 aa10.15□□□□□ -0.78
COMMD4-225ENST00000569245 A0A1B0GW15 77 aa10.15□□□□□ -0.78
COMMD4-225ENST00000569245 A0A1B0GXF2 115 aa10.15□□□□□ -0.78
COMMD4-225ENST00000569245 SPINK4O60575 86 aa10.15□□□□□ -0.78
COMMD4-225ENST00000569245 NXPH4O95158 308 aa10.15□□□□□ -0.78
COMMD4-225ENST00000569245 RASL11AQ6T310 242 aa10.15□□□□□ -0.78
COMMD4-225ENST00000569245 Q6ZTI0 123 aa10.15□□□□□ -0.78
COMMD4-225ENST00000569245 IGLV2-18A0A075B6J9 118 aa10.14□□□□□ -0.79
COMMD4-225ENST00000569245 NTF3P20783 257 aa10.14□□□□□ -0.79
COMMD4-225ENST00000569245 COX19Q49B96 90 aa10.14□□□□□ -0.79
COMMD4-225ENST00000569245 PIK3CD-AS1Q5SR53 167 aa10.14□□□□□ -0.79
COMMD4-225ENST00000569245 MRPL54Q6P161 138 aaKnown RBP10.14□□□□□ -0.79
COMMD4-225ENST00000569245 ZFP82Q8N141 532 aa10.14□□□□□ -0.79
COMMD4-225ENST00000569245 LINC00612Q8N6U2 182 aa10.14□□□□□ -0.79
COMMD4-225ENST00000569245 FRAS1Q86XX4 4008 aa10.14□□□□□ -0.79
COMMD4-225ENST00000569245 TRAV26-1A0A087WT03 109 aa10.13□□□□□ -0.79
COMMD4-225ENST00000569245 MUC21A0A0G2JKD1 596 aa10.13□□□□□ -0.79
COMMD4-225ENST00000569245 A0A0J9YY99 117 aa10.13□□□□□ -0.79
COMMD4-225ENST00000569245 MUC21A0A140T8X8 626 aa10.13□□□□□ -0.79
COMMD4-225ENST00000569245 M0R2P5 195 aa10.13□□□□□ -0.79
COMMD4-225ENST00000569245 S100A8P05109 93 aa10.13□□□□□ -0.79
COMMD4-225ENST00000569245 HBBP68871 147 aa10.13□□□□□ -0.79
COMMD4-225ENST00000569245 SPANXN1Q5VSR9 72 aa10.13□□□□□ -0.79
COMMD4-225ENST00000569245 GATD1Q8NB37 220 aa10.13□□□□□ -0.79
COMMD4-225ENST00000569245 CCL18P55774 89 aa10.12□□□□□ -0.79
COMMD4-225ENST00000569245 TWIST1Q15672 202 aa10.12□□□□□ -0.79
COMMD4-225ENST00000569245 LGALS9BQ3B8N2 356 aa10.12□□□□□ -0.79
COMMD4-225ENST00000569245 DMRTA1Q5VZB9 504 aa10.12□□□□□ -0.79
COMMD4-225ENST00000569245 SYT8Q8NBV8 401 aa10.12□□□□□ -0.79
COMMD4-225ENST00000569245 M0R381 172 aa10.11□□□□□ -0.79
COMMD4-225ENST00000569245 HOXA5P20719 270 aa10.11□□□□□ -0.79
COMMD4-225ENST00000569245 CAMPP49913 170 aa10.11□□□□□ -0.79
COMMD4-225ENST00000569245 ZNF876PQ49A33 203 aa10.11□□□□□ -0.79
COMMD4-225ENST00000569245 RASL10AQ92737 203 aa10.11□□□□□ -0.79
COMMD4-225ENST00000569245 GNB1LQ9BYB4 327 aa10.11□□□□□ -0.79
COMMD4-225ENST00000569245 MRPL16Q9NX20 251 aaKnown RBP10.11□□□□□ -0.79
COMMD4-225ENST00000569245 MSRB1Q9NZV6 116 aa10.11□□□□□ -0.79
COMMD4-225ENST00000569245 TRGC1P0CF51 173 aa10.1□□□□□ -0.79
COMMD4-225ENST00000569245 RAB5AP20339 215 aa10.1□□□□□ -0.79
COMMD4-225ENST00000569245 SSTP61278 116 aa10.1□□□□□ -0.79
COMMD4-225ENST00000569245 TMEM136Q6ZRR5 245 aa10.1□□□□□ -0.79
COMMD4-225ENST00000569245 TMEM191AQ9H0A3 160 aa10.1□□□□□ -0.79
COMMD4-225ENST00000569245 IGHV3-53P01767 116 aa10.09□□□□□ -0.79
COMMD4-225ENST00000569245 MT-ND6P03923 174 aa10.09□□□□□ -0.79
COMMD4-225ENST00000569245 HLA-DQA1P01909 254 aa10.08□□□□□ -0.8
COMMD4-225ENST00000569245 SMIM15Q7Z3B0 74 aa10.08□□□□□ -0.8
COMMD4-225ENST00000569245 C18orf15Q96N68 181 aa10.08□□□□□ -0.8
COMMD4-225ENST00000569245 AP1S3Q96PC3 154 aa10.08□□□□□ -0.8
COMMD4-225ENST00000569245 A8MWV9 139 aa10.07□□□□□ -0.8
COMMD4-225ENST00000569245 RPS10P46783 165 aaKnown RBP10.07□□□□□ -0.8
COMMD4-225ENST00000569245 RAB4BP61018 213 aa10.07□□□□□ -0.8
COMMD4-225ENST00000569245 LINC00336Q6ZUF6 198 aa10.07□□□□□ -0.8
COMMD4-225ENST00000569245 LINC00588Q9Y4M8 146 aa10.07□□□□□ -0.8
COMMD4-225ENST00000569245 KIF25-AS1Q9Y6Z4 181 aa10.07□□□□□ -0.8
COMMD4-225ENST00000569245 H3BNG1 76 aa10.06□□□□□ -0.8
COMMD4-225ENST00000569245 RS1O15537 224 aa10.06□□□□□ -0.8
COMMD4-225ENST00000569245 EVI2AP22794 236 aa10.06□□□□□ -0.8
COMMD4-225ENST00000569245 FAM104BQ5XKR9 115 aa10.06□□□□□ -0.8
COMMD4-225ENST00000569245 C14orf178Q8N769 122 aaPredicted RBP10.06□□□□□ -0.8
COMMD4-225ENST00000569245 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.06□□□□□ -0.8
COMMD4-225ENST00000569245 DPH3P1Q9H4G8 78 aa10.06□□□□□ -0.8
COMMD4-225ENST00000569245 TRAPPC1Q9Y5R8 145 aa10.06□□□□□ -0.8
COMMD4-225ENST00000569245 DNAH2Q9P225 4427 aa10.06□□□□□ -0.8
COMMD4-225ENST00000569245 NACAE9PAV3 2078 aa10.05□□□□□ -0.8
COMMD4-225ENST00000569245 PAX4O43316 350 aa10.05□□□□□ -0.8
COMMD4-225ENST00000569245 CRYGDP07320 174 aa10.05□□□□□ -0.8
COMMD4-225ENST00000569245 Q6ZR54 194 aa10.05□□□□□ -0.8
COMMD4-225ENST00000569245 MRPL18Q9H0U6 180 aaKnown RBP10.05□□□□□ -0.8
COMMD4-225ENST00000569245 JPT2Q9H910 190 aa10.05□□□□□ -0.8
COMMD4-225ENST00000569245 TRGV4A0A0C4DH28 118 aa10.04□□□□□ -0.8
COMMD4-225ENST00000569245 SMIM17P0DL12 118 aa10.04□□□□□ -0.8
COMMD4-225ENST00000569245 RAB4AP20338 218 aa10.04□□□□□ -0.8
COMMD4-225ENST00000569245 LINC00315P59091 139 aa10.04□□□□□ -0.8
COMMD4-225ENST00000569245 SLAQ13239 276 aa10.04□□□□□ -0.8
COMMD4-225ENST00000569245 C1orf134Q5TEV5 83 aa10.04□□□□□ -0.8
COMMD4-225ENST00000569245 CFAP126Q5VTH2 177 aa10.04□□□□□ -0.8
COMMD4-225ENST00000569245 UFSP1Q6NVU6 142 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms