RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 UQCC3Q6UW78 93 aa11.55□□□□□ -0.56
CNEP1R1-210ENST00000568890 LINC00315P59091 139 aa11.54□□□□□ -0.56
CNEP1R1-210ENST00000568890 FAM74A4Q5TZK3 123 aa11.54□□□□□ -0.56
CNEP1R1-210ENST00000568890 KIF25-AS1Q9Y6Z4 181 aa11.54□□□□□ -0.56
CNEP1R1-210ENST00000568890 A0A1W2PPQ1 181 aa11.54□□□□□ -0.56
CNEP1R1-210ENST00000568890 F2Z2F3 143 aa11.54□□□□□ -0.56
CNEP1R1-210ENST00000568890 LY6G6CO95867 125 aa11.54□□□□□ -0.56
CNEP1R1-210ENST00000568890 CTRLP40313 264 aa11.54□□□□□ -0.56
CNEP1R1-210ENST00000568890 CT83Q5H943 113 aa11.54□□□□□ -0.56
CNEP1R1-210ENST00000568890 ZFP2Q6ZN57 461 aa11.54□□□□□ -0.56
CNEP1R1-210ENST00000568890 C14orf178Q8N769 122 aaPredicted RBP11.54□□□□□ -0.56
CNEP1R1-210ENST00000568890 C15orf53Q8NAA6 179 aa11.54□□□□□ -0.56
CNEP1R1-210ENST00000568890 CNFNQ9BYD5 112 aa11.54□□□□□ -0.56
CNEP1R1-210ENST00000568890 ALMS1Q8TCU4 4167 aa11.53□□□□□ -0.56
CNEP1R1-210ENST00000568890 A8MWL6 223 aa11.53□□□□□ -0.56
CNEP1R1-210ENST00000568890 SLAQ13239 276 aa11.53□□□□□ -0.56
CNEP1R1-210ENST00000568890 LGALS9CQ6DKI2 356 aa11.53□□□□□ -0.56
CNEP1R1-210ENST00000568890 OR10G8Q8NGN5 311 aa11.53□□□□□ -0.56
CNEP1R1-210ENST00000568890 TSKUQ8WUA8 353 aa11.53□□□□□ -0.56
CNEP1R1-210ENST00000568890 K7EQD1 137 aa11.52□□□□□ -0.56
CNEP1R1-210ENST00000568890 PGLYRP4Q96LB8 373 aa11.52□□□□□ -0.56
CNEP1R1-210ENST00000568890 GYPEP15421 78 aa11.52□□□□□ -0.57
CNEP1R1-210ENST00000568890 EVI2AP22794 236 aa11.52□□□□□ -0.57
CNEP1R1-210ENST00000568890 ESRGQ1W209 222 aa11.52□□□□□ -0.57
CNEP1R1-210ENST00000568890 RYR2Q92736 4967 aa11.52□□□□□ -0.57
CNEP1R1-210ENST00000568890 TRBV6-4A0A1B0GX49 114 aa11.51□□□□□ -0.57
CNEP1R1-210ENST00000568890 HIGD1CA8MV81 97 aa11.51□□□□□ -0.57
CNEP1R1-210ENST00000568890 P0DMU3 169 aa11.51□□□□□ -0.57
CNEP1R1-210ENST00000568890 FAM231AP0DMU4 169 aa11.51□□□□□ -0.57
CNEP1R1-210ENST00000568890 FAM231CP0DMU5 169 aa11.51□□□□□ -0.57
CNEP1R1-210ENST00000568890 CIDEAO60543 219 aa11.5□□□□□ -0.57
CNEP1R1-210ENST00000568890 C15orf54Q8N8G6 183 aa11.5□□□□□ -0.57
CNEP1R1-210ENST00000568890 WDR73Q6P4I2 378 aa11.5□□□□□ -0.57
CNEP1R1-210ENST00000568890 LINC00588Q9Y4M8 146 aa11.5□□□□□ -0.57
CNEP1R1-210ENST00000568890 F8W036 122 aa11.49□□□□□ -0.57
CNEP1R1-210ENST00000568890 CACNG7P62955 275 aa11.49□□□□□ -0.57
CNEP1R1-210ENST00000568890 TWIST1Q15672 202 aa11.49□□□□□ -0.57
CNEP1R1-210ENST00000568890 NUP35Q8NFH5 326 aa11.49□□□□□ -0.57
CNEP1R1-210ENST00000568890 GFRA4Q9GZZ7 299 aa11.49□□□□□ -0.57
CNEP1R1-210ENST00000568890 RNF212Q495C1 297 aa11.48□□□□□ -0.57
CNEP1R1-210ENST00000568890 SMIM27A0A1W2PRY6 76 aa11.48□□□□□ -0.57
CNEP1R1-210ENST00000568890 FAM231BA6NCW3 169 aa11.48□□□□□ -0.57
CNEP1R1-210ENST00000568890 SEC11CQ9BY50 192 aa11.48□□□□□ -0.57
CNEP1R1-210ENST00000568890 ICOSQ9Y6W8 199 aa11.48□□□□□ -0.57
CNEP1R1-210ENST00000568890 RHODO00212 210 aa11.47□□□□□ -0.57
CNEP1R1-210ENST00000568890 MRPL23Q16540 153 aaKnown RBP11.47□□□□□ -0.57
CNEP1R1-210ENST00000568890 C10orf91Q5T1B1 145 aa11.47□□□□□ -0.57
CNEP1R1-210ENST00000568890 PNRC1Q12796 327 aaPredicted RBP11.47□□□□□ -0.57
CNEP1R1-210ENST00000568890 LYPD5Q6UWN5 251 aa11.47□□□□□ -0.57
CNEP1R1-210ENST00000568890 AP1S3Q96PC3 154 aa11.47□□□□□ -0.57
CNEP1R1-210ENST00000568890 RHOHQ15669 191 aa11.46□□□□□ -0.58
CNEP1R1-210ENST00000568890 RAB4BP61018 213 aa11.45□□□□□ -0.58
CNEP1R1-210ENST00000568890 PRADC1Q9BSG0 188 aa11.45□□□□□ -0.58
CNEP1R1-210ENST00000568890 A0A1B0GUT8 65 aa11.45□□□□□ -0.58
CNEP1R1-210ENST00000568890 GAGE12JA6NER3 117 aa11.45□□□□□ -0.58
CNEP1R1-210ENST00000568890 LINC00694P0DN24 101 aa11.45□□□□□ -0.58
CNEP1R1-210ENST00000568890 GAGE1Q13065 139 aa11.45□□□□□ -0.58
CNEP1R1-210ENST00000568890 GAGE4Q13068 117 aa11.45□□□□□ -0.58
CNEP1R1-210ENST00000568890 GAGE5Q13069 117 aa11.45□□□□□ -0.58
CNEP1R1-210ENST00000568890 ZNF56Q15929 161 aa11.45□□□□□ -0.58
CNEP1R1-210ENST00000568890 GAGE13Q4V321 117 aa11.45□□□□□ -0.58
CNEP1R1-210ENST00000568890 NEGR1Q7Z3B1 354 aa11.45□□□□□ -0.58
CNEP1R1-210ENST00000568890 F5H697 171 aa11.44□□□□□ -0.58
CNEP1R1-210ENST00000568890 SRIP30626 198 aa11.44□□□□□ -0.58
CNEP1R1-210ENST00000568890 SLC7A5P1Q8MH63 180 aa11.44□□□□□ -0.58
CNEP1R1-210ENST00000568890 NAT8BQ9UHF3 227 aa11.44□□□□□ -0.58
CNEP1R1-210ENST00000568890 M0QY20 66 aa11.43□□□□□ -0.58
CNEP1R1-210ENST00000568890 CCL18P55774 89 aa11.43□□□□□ -0.58
CNEP1R1-210ENST00000568890 FAM3BP58499 235 aaPredicted RBP11.43□□□□□ -0.58
CNEP1R1-210ENST00000568890 ZNRF2Q8NHG8 242 aa11.43□□□□□ -0.58
CNEP1R1-210ENST00000568890 SMIM17P0DL12 118 aa11.43□□□□□ -0.58
CNEP1R1-210ENST00000568890 TRAV26-2A0A0B4J265 109 aa11.42□□□□□ -0.58
CNEP1R1-210ENST00000568890 MGPP08493 103 aa11.42□□□□□ -0.58
CNEP1R1-210ENST00000568890 TRGC1P0CF51 173 aa11.42□□□□□ -0.58
CNEP1R1-210ENST00000568890 SUMO4Q6EEV6 95 aa11.42□□□□□ -0.58
CNEP1R1-210ENST00000568890 UBE2DNLQ8IWF7 75 aa11.42□□□□□ -0.58
CNEP1R1-210ENST00000568890 NEXN-AS1Q8NBZ9 246 aa11.42□□□□□ -0.58
CNEP1R1-210ENST00000568890 DPH3P1Q9H4G8 78 aa11.42□□□□□ -0.58
CNEP1R1-210ENST00000568890 CARHSP1Q9Y2V2 147 aaKnown RBP11.42□□□□□ -0.58
CNEP1R1-210ENST00000568890 GAS8-AS1O95177 125 aa11.41□□□□□ -0.58
CNEP1R1-210ENST00000568890 MT-ND4LP03901 98 aa11.41□□□□□ -0.58
CNEP1R1-210ENST00000568890 IGLV2-18A0A075B6J9 118 aa11.41□□□□□ -0.58
CNEP1R1-210ENST00000568890 ANAPC16Q96DE5 110 aa11.41□□□□□ -0.58
CNEP1R1-210ENST00000568890 PPP1R2P9O14990 202 aa11.4□□□□□ -0.58
CNEP1R1-210ENST00000568890 GATD1Q8NB37 220 aa11.4□□□□□ -0.58
CNEP1R1-210ENST00000568890 ATP6V0E2Q8NHE4 81 aa11.4□□□□□ -0.58
CNEP1R1-210ENST00000568890 RNF185Q96GF1 192 aa11.4□□□□□ -0.58
CNEP1R1-210ENST00000568890 Q9H8V8 135 aa11.39□□□□□ -0.59
CNEP1R1-210ENST00000568890 MRPS16Q9Y3D3 137 aaKnown RBP11.39□□□□□ -0.59
CNEP1R1-210ENST00000568890 TRBV7-3A0A075B6L6 115 aa11.39□□□□□ -0.59
CNEP1R1-210ENST00000568890 TRBV10-1A0A0K0K1A3 114 aa11.39□□□□□ -0.59
CNEP1R1-210ENST00000568890 UPK3BQ9BT76 320 aa11.39□□□□□ -0.59
CNEP1R1-210ENST00000568890 TMEM191AQ9H0A3 160 aa11.39□□□□□ -0.59
CNEP1R1-210ENST00000568890 DNAH2Q9P225 4427 aa11.38□□□□□ -0.59
CNEP1R1-210ENST00000568890 M0R2N4 97 aa11.38□□□□□ -0.59
CNEP1R1-210ENST00000568890 UBE2D3P61077 147 aa11.38□□□□□ -0.59
CNEP1R1-210ENST00000568890 UBE2D2P62837 147 aa11.38□□□□□ -0.59
CNEP1R1-210ENST00000568890 MRPL54Q6P161 138 aaKnown RBP11.38□□□□□ -0.59
CNEP1R1-210ENST00000568890 DNAH6Q9C0G6 4158 aa11.38□□□□□ -0.59
CNEP1R1-210ENST00000568890 A0A1B0GXF2 115 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms