RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, human

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-211	ENST00000568329	SPRY2	O43597	315 aa		11.11	□□□□□ -0.63
CSK-211	ENST00000568329	PRM2	P04554	102 aa		11.11	□□□□□ -0.63
CSK-211	ENST00000568329	NDUFA6	P56556	154 aa		11.11	□□□□□ -0.63
CSK-211	ENST00000568329	DEFB135	Q30KP9	77 aa		11.11	□□□□□ -0.63
CSK-211	ENST00000568329		D6R8Y8	96 aa		11.1	□□□□□ -0.63
CSK-211	ENST00000568329	PPP1R17	O96001	155 aa		11.1	□□□□□ -0.63
CSK-211	ENST00000568329	POM121L12	Q8N7R1	296 aa		11.1	□□□□□ -0.63
CSK-211	ENST00000568329	RNF183	Q96D59	192 aa		11.1	□□□□□ -0.63
CSK-211	ENST00000568329	OVOL2	Q9BRP0	275 aa		11.1	□□□□□ -0.63
CSK-211	ENST00000568329	TP53TG1	Q9Y2A0	90 aa		11.1	□□□□□ -0.63
CSK-211	ENST00000568329	RHOD	O00212	210 aa		11.09	□□□□□ -0.63
CSK-211	ENST00000568329	C18orf32	Q8TCD1	76 aa		11.09	□□□□□ -0.63
CSK-211	ENST00000568329	PRELID3A	Q96N28	172 aa		11.09	□□□□□ -0.63
CSK-211	ENST00000568329	KIF25-AS1	Q9Y6Z4	181 aa		11.09	□□□□□ -0.63
CSK-211	ENST00000568329		X6R8D5	127 aa		11.09	□□□□□ -0.63
CSK-211	ENST00000568329	MGP	P08493	103 aa		11.08	□□□□□ -0.64
CSK-211	ENST00000568329	MIF	P14174	115 aa		11.08	□□□□□ -0.64
CSK-211	ENST00000568329	BAGE3	Q86Y29	109 aa		11.08	□□□□□ -0.64
CSK-211	ENST00000568329	TRGV1	A0A0A0MS02	117 aa		11.07	□□□□□ -0.64
CSK-211	ENST00000568329	PLAC8L1	A1L4L8	177 aa		11.07	□□□□□ -0.64
CSK-211	ENST00000568329	C5orf52	A6NGY3	159 aa		11.07	□□□□□ -0.64
CSK-211	ENST00000568329	CRYGD	P07320	174 aa		11.07	□□□□□ -0.64
CSK-211	ENST00000568329	OR11H2	Q8NH07	326 aa		11.07	□□□□□ -0.64
CSK-211	ENST00000568329		A0A087WWL8	130 aa		11.07	□□□□□ -0.64
CSK-211	ENST00000568329	CIDEA	O60543	219 aa		11.07	□□□□□ -0.64
CSK-211	ENST00000568329	LINC00315	P59091	139 aa		11.07	□□□□□ -0.64
CSK-211	ENST00000568329	FAM74A4	Q5TZK3	123 aa		11.07	□□□□□ -0.64
CSK-211	ENST00000568329	ZFP2	Q6ZN57	461 aa		11.07	□□□□□ -0.64
CSK-211	ENST00000568329	NOP10	Q9NPE3	64 aa	Known RBP	11.07	□□□□□ -0.64
CSK-211	ENST00000568329	MRPL16	Q9NX20	251 aa	Known RBP	11.07	□□□□□ -0.64
CSK-211	ENST00000568329	SNRPE	P62304	92 aa	Known RBP	11.06	□□□□□ -0.64
CSK-211	ENST00000568329	JPT2	Q9H910	190 aa		11.06	□□□□□ -0.64
CSK-211	ENST00000568329		F5H697	171 aa		11.05	□□□□□ -0.64
CSK-211	ENST00000568329		H7C1H1	209 aa		11.05	□□□□□ -0.64
CSK-211	ENST00000568329	RS1	O15537	224 aa		11.05	□□□□□ -0.64
CSK-211	ENST00000568329	HOXA5	P20719	270 aa		11.05	□□□□□ -0.64
CSK-211	ENST00000568329	ZNF56	Q15929	161 aa		11.05	□□□□□ -0.64
CSK-211	ENST00000568329	CFAP126	Q5VTH2	177 aa		11.05	□□□□□ -0.64
CSK-211	ENST00000568329	MAP1LC3A	Q9H492	121 aa		11.05	□□□□□ -0.64
CSK-211	ENST00000568329	EDA2R	Q9HAV5	297 aa		11.05	□□□□□ -0.64
CSK-211	ENST00000568329	TRAV4	A0A0B4J268	109 aa		11.04	□□□□□ -0.64
CSK-211	ENST00000568329	TNFRSF6B	O95407	300 aa		11.04	□□□□□ -0.64
CSK-211	ENST00000568329	NCR2	O95944	276 aa		11.04	□□□□□ -0.64
CSK-211	ENST00000568329	DEFB121	Q5J5C9	76 aa		11.04	□□□□□ -0.64
CSK-211	ENST00000568329	SAMD10	Q9BYL1	202 aa		11.04	□□□□□ -0.64
CSK-211	ENST00000568329	LYRM9	A8MSI8	78 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	NPY	P01303	97 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	ESD	P10768	282 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329		Q6ZTI0	123 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	OR4C5	Q8NGB2	326 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	CHCHD1	Q96BP2	118 aa	Known RBP	11.03	□□□□□ -0.64
CSK-211	ENST00000568329	C18orf15	Q96N68	181 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	C20orf78	Q9BR46	151 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	TRGV2	A0A075B6R0	118 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	TRAV26-2	A0A0B4J265	109 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	PRSS47	A8MTI9	375 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	SMKR1	H3BMG3	65 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	SERF1A	O75920	110 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	S100A2	P29034	98 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	SUMO4	Q6EEV6	95 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	UFSP1	Q6NVU6	142 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	NRAC	Q8N912	160 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	PRSS3P2	Q8NHM4	247 aa		11.03	□□□□□ -0.64
CSK-211	ENST00000568329	NXT2	Q9NPJ8	142 aa	Known RBP	11.03	□□□□□ -0.64
CSK-211	ENST00000568329	IGHV4-28	A0A0C4DH34	117 aa		11.02	□□□□□ -0.65
CSK-211	ENST00000568329	TEX48	A0A1B0GUV7	120 aa		11.02	□□□□□ -0.65
CSK-211	ENST00000568329	IQCJ	Q1A5X6	159 aa		11.02	□□□□□ -0.65
CSK-211	ENST00000568329	SBSPON	Q8IVN8	264 aa		11.02	□□□□□ -0.65
CSK-211	ENST00000568329	LINC00612	Q8N6U2	182 aa		11.02	□□□□□ -0.65
CSK-211	ENST00000568329		Q8NAQ8	132 aa		11.02	□□□□□ -0.65
CSK-211	ENST00000568329	MRAP	Q8TCY5	172 aa		11.02	□□□□□ -0.65
CSK-211	ENST00000568329	LINC00614	P0C842	121 aa		11.01	□□□□□ -0.65
CSK-211	ENST00000568329	PMCH	P20382	165 aa		11.01	□□□□□ -0.65
CSK-211	ENST00000568329	EMP1	P54849	157 aa		11.01	□□□□□ -0.65
CSK-211	ENST00000568329	HIST3H2BB	Q8N257	126 aa		11.01	□□□□□ -0.65
CSK-211	ENST00000568329	GAGE12B	A1L429	117 aa		11	□□□□□ -0.65
CSK-211	ENST00000568329		M0QY20	66 aa		11	□□□□□ -0.65
CSK-211	ENST00000568329	HSBP1	O75506	76 aa		11	□□□□□ -0.65
CSK-211	ENST00000568329	GAGE7	O76087	117 aa		11	□□□□□ -0.65
CSK-211	ENST00000568329	GAGE12F	P0CL80	117 aa		11	□□□□□ -0.65
CSK-211	ENST00000568329	GAGE12G	P0CL81	117 aa		11	□□□□□ -0.65
CSK-211	ENST00000568329	GAGE12I	P0CL82	117 aa		11	□□□□□ -0.65
CSK-211	ENST00000568329	SUMO2	P61956	95 aa	Known RBP	11	□□□□□ -0.65
CSK-211	ENST00000568329	RNASEK	Q6P5S7	137 aa	Known RBP	11	□□□□□ -0.65
CSK-211	ENST00000568329	FA2H	Q7L5A8	372 aa		11	□□□□□ -0.65
CSK-211	ENST00000568329	NIT1	Q86X76	327 aa		11	□□□□□ -0.65
CSK-211	ENST00000568329	AP5S1	Q9NUS5	200 aa		11	□□□□□ -0.65
CSK-211	ENST00000568329	TRBV6-5	A0A0K0K1A5	114 aa		10.99	□□□□□ -0.65
CSK-211	ENST00000568329	IGHV3-53	P01767	116 aa		10.99	□□□□□ -0.65
CSK-211	ENST00000568329	GATA1	P15976	413 aa	Predicted RBP	10.99	□□□□□ -0.65
CSK-211	ENST00000568329	RPL32	P62910	135 aa	Known RBP	10.99	□□□□□ -0.65
CSK-211	ENST00000568329	TMEM18	Q96B42	140 aa		10.99	□□□□□ -0.65
CSK-211	ENST00000568329	PACRG	Q96M98	296 aa	Predicted RBP	10.99	□□□□□ -0.65
CSK-211	ENST00000568329	NIT2	Q9NQR4	276 aa		10.99	□□□□□ -0.65
CSK-211	ENST00000568329		K7EMI3	77 aa		10.99	□□□□□ -0.65
CSK-211	ENST00000568329	GAS8-AS1	O95177	125 aa		10.99	□□□□□ -0.65
CSK-211	ENST00000568329	LINC00310	P59036	64 aa		10.99	□□□□□ -0.65
CSK-211	ENST00000568329	TM2D3	Q9BRN9	247 aa		10.99	□□□□□ -0.65
CSK-211	ENST00000568329	ST20	Q9HBF5	79 aa		10.99	□□□□□ -0.65
CSK-211	ENST00000568329	RETN	Q9HD89	108 aa		10.99	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms