RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 MED9Q9NWA0 146 aa6.47□□□□□ -1.37
SF3B3-211ENST00000568291 IL36BQ9NZH7 164 aa6.47□□□□□ -1.37
SF3B3-211ENST00000568291 PHLDA3Q9Y5J5 127 aa6.47□□□□□ -1.37
SF3B3-211ENST00000568291 S100A9P06702 114 aaKnown RBP6.46□□□□□ -1.38
SF3B3-211ENST00000568291 LINC00315P59091 139 aa6.46□□□□□ -1.38
SF3B3-211ENST00000568291 CENPWQ5EE01 88 aa6.46□□□□□ -1.38
SF3B3-211ENST00000568291 Q8N3U1 123 aa6.46□□□□□ -1.38
SF3B3-211ENST00000568291 OR10AG1Q8NH19 301 aa6.46□□□□□ -1.38
SF3B3-211ENST00000568291 PTH2Q96A98 100 aa6.46□□□□□ -1.38
SF3B3-211ENST00000568291 TRBV20OR9-2A0A075B6H5 130 aa6.45□□□□□ -1.38
SF3B3-211ENST00000568291 TRBV6-4A0A1B0GX49 114 aa6.45□□□□□ -1.38
SF3B3-211ENST00000568291 RBFOX3A6NFN3 312 aa6.45□□□□□ -1.38
SF3B3-211ENST00000568291 A8MWV9 139 aa6.45□□□□□ -1.38
SF3B3-211ENST00000568291 TEX46H3BTG2 121 aa6.45□□□□□ -1.38
SF3B3-211ENST00000568291 CRYGDP07320 174 aa6.45□□□□□ -1.38
SF3B3-211ENST00000568291 BCL2P10415 239 aa6.45□□□□□ -1.38
SF3B3-211ENST00000568291 MEF2BQ02080 365 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-211ENST00000568291 UFSP1Q6NVU6 142 aa6.45□□□□□ -1.38
SF3B3-211ENST00000568291 Q8N1X5 172 aa6.45□□□□□ -1.38
SF3B3-211ENST00000568291 C11orf52Q96A22 123 aa6.45□□□□□ -1.38
SF3B3-211ENST00000568291 TXNDC17Q9BRA2 123 aa6.45□□□□□ -1.38
SF3B3-211ENST00000568291 PRADC1Q9BSG0 188 aa6.45□□□□□ -1.38
SF3B3-211ENST00000568291 TPPP3Q9BW30 176 aa6.45□□□□□ -1.38
SF3B3-211ENST00000568291 SCRT2Q9NQ03 307 aa6.45□□□□□ -1.38
SF3B3-211ENST00000568291 IGHV3-30P01768 117 aa6.44□□□□□ -1.38
SF3B3-211ENST00000568291 IGHV3-33P01772 117 aa6.44□□□□□ -1.38
SF3B3-211ENST00000568291 IGHV3-30-3P0DP02 117 aa6.44□□□□□ -1.38
SF3B3-211ENST00000568291 IGHV3-30-5P0DP03 117 aa6.44□□□□□ -1.38
SF3B3-211ENST00000568291 GNG4P50150 75 aa6.44□□□□□ -1.38
SF3B3-211ENST00000568291 CEBPGP53567 150 aa6.44□□□□□ -1.38
SF3B3-211ENST00000568291 RHOHQ15669 191 aa6.44□□□□□ -1.38
SF3B3-211ENST00000568291 DNLZQ5SXM8 178 aa6.44□□□□□ -1.38
SF3B3-211ENST00000568291 SYT8Q8NBV8 401 aa6.44□□□□□ -1.38
SF3B3-211ENST00000568291 ATP6V0E2Q8NHE4 81 aa6.44□□□□□ -1.38
SF3B3-211ENST00000568291 SFRP2Q96HF1 295 aa6.44□□□□□ -1.38
SF3B3-211ENST00000568291 VAX2Q9UIW0 290 aa6.44□□□□□ -1.38
SF3B3-211ENST00000568291 LY96Q9Y6Y9 160 aa6.44□□□□□ -1.38
SF3B3-211ENST00000568291 IFNA1P01562 189 aa6.43□□□□□ -1.38
SF3B3-211ENST00000568291 KRTAP10-2P60368 255 aa6.43□□□□□ -1.38
SF3B3-211ENST00000568291 OR10J3Q5JRS4 329 aa6.43□□□□□ -1.38
SF3B3-211ENST00000568291 ZFP2Q6ZN57 461 aa6.43□□□□□ -1.38
SF3B3-211ENST00000568291 ZFP82Q8N141 532 aa6.43□□□□□ -1.38
SF3B3-211ENST00000568291 OR2D3Q8NGH3 330 aa6.43□□□□□ -1.38
SF3B3-211ENST00000568291 MSRB1Q9NZV6 116 aa6.43□□□□□ -1.38
SF3B3-211ENST00000568291 LRP1BQ9NZR2 4599 aa6.42□□□□□ -1.38
SF3B3-211ENST00000568291 A0A1W2PPQ1 181 aa6.42□□□□□ -1.38
SF3B3-211ENST00000568291 PDE6DO43924 150 aa6.42□□□□□ -1.38
SF3B3-211ENST00000568291 DNAH10OSP0CZ25 163 aa6.42□□□□□ -1.38
SF3B3-211ENST00000568291 Q6ZRN7 208 aaPredicted RBP6.42□□□□□ -1.38
SF3B3-211ENST00000568291 DAZAP1Q96EP5 407 aaKnown RBP6.42□□□□□ -1.38
SF3B3-211ENST00000568291 GTSF1LQ9H1H1 148 aa6.42□□□□□ -1.38
SF3B3-211ENST00000568291 IGHV3-38A0A0C4DH36 116 aa6.41□□□□□ -1.38
SF3B3-211ENST00000568291 C19orf71A6NCJ1 209 aa6.41□□□□□ -1.38
SF3B3-211ENST00000568291 K7EN84 100 aa6.41□□□□□ -1.38
SF3B3-211ENST00000568291 BTF3P20290 206 aaKnown RBP6.41□□□□□ -1.38
SF3B3-211ENST00000568291 EVI2AP22794 236 aa6.41□□□□□ -1.38
SF3B3-211ENST00000568291 BLOC1S1P78537 153 aa6.41□□□□□ -1.38
SF3B3-211ENST00000568291 SPANXN1Q5VSR9 72 aa6.41□□□□□ -1.38
SF3B3-211ENST00000568291 NUDT10Q8NFP7 164 aa6.41□□□□□ -1.38
SF3B3-211ENST00000568291 OCC1Q8TAD7 63 aa6.41□□□□□ -1.38
SF3B3-211ENST00000568291 DEFB104AQ8WTQ1 72 aa6.41□□□□□ -1.38
SF3B3-211ENST00000568291 NUDT11Q96G61 164 aa6.41□□□□□ -1.38
SF3B3-211ENST00000568291 SSBP4Q9BWG4 385 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-211ENST00000568291 RNASE7Q9H1E1 156 aaKnown RBP6.41□□□□□ -1.38
SF3B3-211ENST00000568291 DMBT1Q9UGM3 2413 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-211ENST00000568291 TRAV9-2A0A087WT02 112 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 TRAV8-6A0A0B4J262 113 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 F5H697 171 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 SNAI2O43623 268 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 CIDEAO60543 219 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 P01737 135 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 LINC00694P0DN24 101 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 ZNF56Q15929 161 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 TOR2AQ5JU69 321 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 PIK3CD-AS1Q5SR53 167 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 LELP1Q5T871 98 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 LYZL1Q6UWQ5 148 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 SH2D6Q7Z4S9 175 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 DNAJC30Q96LL9 226 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 Q9HAA7 133 aa6.4□□□□□ -1.38
SF3B3-211ENST00000568291 RHODO00212 210 aa6.39□□□□□ -1.39
SF3B3-211ENST00000568291 OR5AL1P0C617 328 aa6.39□□□□□ -1.39
SF3B3-211ENST00000568291 IGLC6P0CF74 106 aa6.39□□□□□ -1.39
SF3B3-211ENST00000568291 DAZ4Q86SG3 579 aaKnown RBP6.39□□□□□ -1.39
SF3B3-211ENST00000568291 FER1L6-AS1Q8NA97 138 aa6.39□□□□□ -1.39
SF3B3-211ENST00000568291 EIF5A2Q9GZV4 153 aaKnown RBP6.39□□□□□ -1.39
SF3B3-211ENST00000568291 DAZ3Q9NR90 486 aaKnown RBP6.39□□□□□ -1.39
SF3B3-211ENST00000568291 APOBP04114 4563 aaKnown RBP6.38□□□□□ -1.39
SF3B3-211ENST00000568291 MGPP08493 103 aa6.38□□□□□ -1.39
SF3B3-211ENST00000568291 TIRAPP58753 221 aa6.38□□□□□ -1.39
SF3B3-211ENST00000568291 NEXN-AS1Q8NBZ9 246 aa6.38□□□□□ -1.39
SF3B3-211ENST00000568291 LYPD6BQ8NI32 183 aa6.38□□□□□ -1.39
SF3B3-211ENST00000568291 KIF25-AS1Q9Y6Z4 181 aa6.38□□□□□ -1.39
SF3B3-211ENST00000568291 C9JQL5 133 aa6.37□□□□□ -1.39
SF3B3-211ENST00000568291 GHRHP01286 108 aa6.37□□□□□ -1.39
SF3B3-211ENST00000568291 CXCL1P09341 107 aa6.37□□□□□ -1.39
SF3B3-211ENST00000568291 NTF3P20783 257 aa6.37□□□□□ -1.39
SF3B3-211ENST00000568291 FOXA3P55318 350 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-211ENST00000568291 RAB4BP61018 213 aa6.37□□□□□ -1.39
SF3B3-211ENST00000568291 UBE2D3P61077 147 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms