RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 MANBALQ9NQG1 85 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 C21orf62Q9NYP8 219 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 RPUSD1Q9UJJ7 312 aaKnown RBP2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 PXMP4Q9Y6I8 212 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 CSMD1Q96PZ7 3565 aa2.03□□□□□ -2.09
HERPUD1-212ENST00000567944 COL6A5A8TX70 2615 aa2.03□□□□□ -2.09
HERPUD1-212ENST00000567944 DOCK10Q96BY6 2186 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 NSD1Q96L73 2696 aaPredicted RBP2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 TNRC6AQ8NDV7 1962 aaKnown RBP2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 TRAV14DV4A0A0A6YYC5 116 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 TRAV2A0A0B4J234 112 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 IGHV1-58A0A0C4DH39 117 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 TRBV7-7A0A0K0K1E9 115 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 LOC107984640A0A0U1RRK4 108 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 IZUMO1RA6ND01 250 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 C10orf142B7Z368 130 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 ZNF737O75373 536 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 COX8AP10176 69 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 MPV17P39210 176 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 P2RX1P51575 399 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 FOXA3P55318 350 aaPredicted RBP2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 QRFPP83859 136 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 ERCC8Q13216 396 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 ZNF141Q15928 474 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 ETDBQ3ZM63 59 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 C1orf140Q5VVS0 124 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 CYP2G1PQ6ZSU1 146 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 C6orf201Q7Z4U5 140 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 MYOZ3Q8TDC0 251 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 BRK1Q8WUW1 75 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 LRRC29Q8WV35 223 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 PRSS27Q9BQR3 290 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 AICDAQ9GZX7 198 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 CXCL16Q9H2A7 254 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 FAM60AQ9NP50 221 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 DAZ1Q9NQZ3 744 aaKnown RBP2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 PCTPQ9UKL6 214 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 LSM2Q9Y333 95 aaKnown RBP2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 ARL2-SNX15V9GYD0 113 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 NBEAL1Q6ZS30 2694 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 SPTBP11277 2137 aa2.02□□□□□ -2.09
HERPUD1-212ENST00000567944 DNHD1Q96M86 4753 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 ZNF106Q9H2Y7 1883 aaKnown RBP2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 DSPPQ9NZW4 1301 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 TRGV5A0A0B4J1U4 118 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 FAM236AA0A1B0GUQ0 79 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 FAM236BA0A1B0GV22 79 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 C5orf63A6NC05 138 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 PGPA6NDG6 321 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 NCBP2LA6PVI3 153 aaKnown RBP2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 ZNF727A8MUV8 499 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 A8MWL6 223 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 F6UB75 175 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 H3BT86 120 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 SDCBPO00560 298 aaPredicted RBP2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 NDUFC1O43677 76 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 PDCD6O75340 191 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 IGHV3-7P01780 117 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 HLA-DQA1P01909 254 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 SRP19P09132 144 aaKnown RBP2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 COX6A1P12074 109 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 HLA-DRB4P13762 266 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 CBLN1P23435 193 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 HLA-DMBP28068 263 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 PPICP45877 212 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 DIAPH2-AS1Q14236 149 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 CST6Q15828 149 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 LGALS9BQ3B8N2 356 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 LINC00303Q3SY05 128 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 CENPWQ5EE01 88 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 ZNF678Q5SXM1 525 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 ZCCHC23Q6ZST2 131 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 DAZ4Q86SG3 579 aaKnown RBP2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 OR5AS1Q8N127 324 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 LYPD1Q8N2G4 141 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 EXOC3-AS1Q8N2X6 119 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 LY6G5BQ8NDX9 201 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 NAA38Q9BRA0 125 aaKnown RBP2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 GNB1LQ9BYB4 327 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 PLEKHF2Q9H8W4 249 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 ZNF286AQ9HBT8 521 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 BCL2L10Q9HD36 194 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 DYNLRB1Q9NP97 96 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 TAAR3PQ9P1P4 343 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 ZNRD1Q9P1U0 126 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 HIGD1BQ9P298 99 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 GNG13Q9P2W3 67 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 KCNE3Q9Y6H6 103 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 HLA-DRB4X5D2U9 266 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 TACC2O95359 2948 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 DCHS2Q6V1P9 2916 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
HERPUD1-212ENST00000567944 INTS1Q8N201 2190 aaKnown RBP2□□□□□ -2.09
HERPUD1-212ENST00000567944 AKAP9Q99996 3911 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 DOCK4Q8N1I0 1966 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 IGLV2-18A0A075B6J9 118 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 IGHV1-24A0A0C4DH33 117 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 A0A0J9YW62 118 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 UBE2L5PA0A1B0GUS4 154 aa2□□□□□ -2.09
HERPUD1-212ENST00000567944 J3QT63 122 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms