RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 RNF223E7ERA6 249 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 GNRH2O43555 120 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 NSUN5P1Q3KNT7 163 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 RUSC1-AS1Q66K80 236 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 LINC00173Q6ZV60 143 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 NDUFA11Q86Y39 141 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 IMUPQ9GZP8 106 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 SND1-IT1Q9HBX3 110 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 MALRD1Q5VYJ5 2156 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 H7C423 109 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 K7EQD1 137 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 DEFB130BP0DP73 79 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 DEFB130AP0DP74 79 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 FUSP35637 526 aaKnown RBP eCLIP3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 WFDC2Q14508 124 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 VSIG2Q96IQ7 327 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 TP73-AS1Q9UF72 201 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 SELENOKQ9Y6D0 94 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 DIDO1Q9BTC0 2240 aaKnown RBP3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 P0DMU3 169 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 FAM231AP0DMU4 169 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 FAM231CP0DMU5 169 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 C5orf56Q8N8D9 126 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 U3KQE9 123 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 A0A0J9YXV3 536 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 TMEM256-PLSCR3K7ERE1 68 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 IGHG2P01859 326 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 ZNF295-AS1Q8N0V1 137 aa3.35□□□□□ -1.87
LPCAT2-208ENST00000566915 ROS1P08922 2347 aa3.34□□□□□ -1.87
LPCAT2-208ENST00000566915 TRBV7-3A0A075B6L6 115 aa3.34□□□□□ -1.87
LPCAT2-208ENST00000566915 TRAV12-2A0A075B6T6 113 aa3.34□□□□□ -1.87
LPCAT2-208ENST00000566915 TINCRA0A1B0GVN0 87 aa3.34□□□□□ -1.87
LPCAT2-208ENST00000566915 MYCNOSP40205 109 aa3.34□□□□□ -1.87
LPCAT2-208ENST00000566915 COX7B2Q8TF08 81 aa3.34□□□□□ -1.87
LPCAT2-208ENST00000566915 GVINP1Q7Z2Y8 2422 aa3.34□□□□□ -1.87
LPCAT2-208ENST00000566915 POLEQ07864 2286 aa3.34□□□□□ -1.87
LPCAT2-208ENST00000566915 LGALS9O00182 355 aa3.34□□□□□ -1.87
LPCAT2-208ENST00000566915 MIAQ16674 131 aa3.34□□□□□ -1.87
LPCAT2-208ENST00000566915 CRIP3Q6Q6R5 217 aa3.34□□□□□ -1.87
LPCAT2-208ENST00000566915 USP34Q70CQ2 3546 aa3.34□□□□□ -1.87
LPCAT2-208ENST00000566915 CHD3Q12873 2000 aaKnown RBP3.34□□□□□ -1.87
LPCAT2-208ENST00000566915 TMEM131Q92545 1883 aa3.34□□□□□ -1.88
LPCAT2-208ENST00000566915 TIMM17BO60830 172 aa3.34□□□□□ -1.88
LPCAT2-208ENST00000566915 LY6HO94772 140 aa3.34□□□□□ -1.88
LPCAT2-208ENST00000566915 RPL39LQ96EH5 51 aaKnown RBP3.34□□□□□ -1.88
LPCAT2-208ENST00000566915 MSRB1Q9NZV6 116 aa3.34□□□□□ -1.88
LPCAT2-208ENST00000566915 PKDREJQ9NTG1 2253 aa3.34□□□□□ -1.88
LPCAT2-208ENST00000566915 CUL9Q8IWT3 2517 aa3.34□□□□□ -1.88
LPCAT2-208ENST00000566915 GATA1P15976 413 aaPredicted RBP3.34□□□□□ -1.88
LPCAT2-208ENST00000566915 EBI3Q14213 229 aa3.34□□□□□ -1.88
LPCAT2-208ENST00000566915 FANCD2OSQ96PS1 177 aa3.34□□□□□ -1.88
LPCAT2-208ENST00000566915 DOCK7Q96N67 2140 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 F5H768 121 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 UQCRQO14949 82 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 RBM3P98179 157 aaKnown RBP3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 LOXL1Q08397 574 aaPredicted RBP3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 UBE2DNLQ8IWF7 75 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 NEXN-AS1Q8NBZ9 246 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 AJUBAQ96IF1 538 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 GTF3C1Q12789 2109 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 ABCA1O95477 2261 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 IGHV3-16A0A0C4DH30 117 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 TRBV30A0A0K0K1B3 111 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 COX7A2LO14548 114 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 BRWD1-AS2P59051 145 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 NCOA6Q14686 2063 aaPredicted RBP3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 USF3Q68DE3 2245 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 FAM236AA0A1B0GUQ0 79 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 FAM236BA0A1B0GV22 79 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 A0A1B0GX51 115 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 ODF3BA8MYP8 253 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 PSCAO43653 123 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 PROP1O75360 226 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 PSMB8P28062 276 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 CENPFP49454 3210 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 Q6ZUT4 128 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 SPATA25Q9BR10 227 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 IGHV3-38A0A0C4DH36 116 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 TRBV6-5A0A0K0K1A5 114 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 ANGP03950 147 aaKnown RBP3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 CRYGBP07316 175 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 HIST2H2BCQ6DN03 193 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 HIST2H2BDQ6DRA6 164 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 SIRPDQ9H106 197 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 PYGO1Q9Y3Y4 419 aa3.33□□□□□ -1.88
LPCAT2-208ENST00000566915 CREBBPQ92793 2442 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 A0A0J9YX75 114 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 PIK3CD-AS1Q5SR53 167 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 FAM222AQ5U5X8 452 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 MUC7Q8TAX7 377 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 IGHV4-4A0A075B6R2 117 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 TRAV4A0A0B4J268 109 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 NXPH4O95158 308 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 IGF1P05019 195 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 IGHV3-30-3P0DP02 117 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 MP68P56378 58 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 IGKV2-29A2NJV5 120 aaPredicted RBP3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 PRB4P10163 310 aaPredicted RBP3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 TIRAPP58753 221 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms