RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CSMD1Q96PZ7 3565 aa12.57□□□□□ -0.4
CMTM3-213ENST00000566756 TEX15Q9BXT5 2789 aa12.56□□□□□ -0.4
CMTM3-213ENST00000566756 BAALCQ8WXS3 180 aa12.56□□□□□ -0.4
CMTM3-213ENST00000566756 MYMXA0A1B0GTQ4 84 aa12.56□□□□□ -0.4
CMTM3-213ENST00000566756 TMEM89A2RUT3 159 aa12.56□□□□□ -0.4
CMTM3-213ENST00000566756 E9PLD3 99 aa12.56□□□□□ -0.4
CMTM3-213ENST00000566756 GNRH2O43555 120 aa12.56□□□□□ -0.4
CMTM3-213ENST00000566756 MGPP08493 103 aa12.56□□□□□ -0.4
CMTM3-213ENST00000566756 LINC00315P59091 139 aa12.56□□□□□ -0.4
CMTM3-213ENST00000566756 C21orf62-AS1Q17RA5 79 aa12.56□□□□□ -0.4
CMTM3-213ENST00000566756 VPREB3Q9UKI3 123 aa12.56□□□□□ -0.4
CMTM3-213ENST00000566756 TRBV7-3A0A075B6L6 115 aa12.55□□□□□ -0.4
CMTM3-213ENST00000566756 A0A1B0GWB2 263 aa12.55□□□□□ -0.4
CMTM3-213ENST00000566756 F6UB75 175 aa12.55□□□□□ -0.4
CMTM3-213ENST00000566756 G3V4G9 280 aa12.55□□□□□ -0.4
CMTM3-213ENST00000566756 NHP2Q9NX24 153 aaKnown RBP12.55□□□□□ -0.4
CMTM3-213ENST00000566756 UNC79Q9P2D8 2635 aa12.55□□□□□ -0.4
CMTM3-213ENST00000566756 PAPPA-AS1Q5QFB9 102 aa12.54□□□□□ -0.4
CMTM3-213ENST00000566756 FAM159AQ6UWV7 190 aa12.54□□□□□ -0.4
CMTM3-213ENST00000566756 Q6ZS46 218 aa12.54□□□□□ -0.4
CMTM3-213ENST00000566756 DCANP1Q8TF63 244 aa12.54□□□□□ -0.4
CMTM3-213ENST00000566756 CSTL1Q9H114 145 aa12.54□□□□□ -0.4
CMTM3-213ENST00000566756 CCDC168Q8NDH2 2452 aa12.54□□□□□ -0.4
CMTM3-213ENST00000566756 GCN1Q92616 2671 aaKnown RBP12.54□□□□□ -0.4
CMTM3-213ENST00000566756 DEFB1P60022 68 aa12.54□□□□□ -0.4
CMTM3-213ENST00000566756 CYSLTR1Q9Y271 337 aa12.54□□□□□ -0.4
CMTM3-213ENST00000566756 COTL1Q14019 142 aa12.53□□□□□ -0.4
CMTM3-213ENST00000566756 C12orf74Q32Q52 190 aa12.53□□□□□ -0.4
CMTM3-213ENST00000566756 HIST1H4GQ99525 98 aa12.53□□□□□ -0.4
CMTM3-213ENST00000566756 ZFHX3Q15911 3703 aa12.53□□□□□ -0.4
CMTM3-213ENST00000566756 PRSS29PA6NIE9 313 aa12.52□□□□□ -0.4
CMTM3-213ENST00000566756 IGLL5B9A064 214 aa12.52□□□□□ -0.4
CMTM3-213ENST00000566756 SAP30O75446 220 aa12.52□□□□□ -0.4
CMTM3-213ENST00000566756 POLR2KP53803 58 aaKnown RBP12.52□□□□□ -0.4
CMTM3-213ENST00000566756 ITPR2Q14571 2701 aa12.52□□□□□ -0.4
CMTM3-213ENST00000566756 K7ERJ3 54 aa12.52□□□□□ -0.41
CMTM3-213ENST00000566756 PSMB8P28062 276 aa12.52□□□□□ -0.41
CMTM3-213ENST00000566756 TRBV6-5A0A0K0K1A5 114 aa12.51□□□□□ -0.41
CMTM3-213ENST00000566756 FOXI2Q6ZQN5 318 aa12.51□□□□□ -0.41
CMTM3-213ENST00000566756 TMEM141Q96I45 108 aa12.51□□□□□ -0.41
CMTM3-213ENST00000566756 VCYO14598 125 aa12.5□□□□□ -0.41
CMTM3-213ENST00000566756 LGALS9O00182 355 aa12.5□□□□□ -0.41
CMTM3-213ENST00000566756 SPRY2O43597 315 aa12.5□□□□□ -0.41
CMTM3-213ENST00000566756 ZNF479Q96JC4 524 aa12.5□□□□□ -0.41
CMTM3-213ENST00000566756 TIMM17AQ99595 171 aa12.5□□□□□ -0.41
CMTM3-213ENST00000566756 FLNAP21333 2647 aaKnown RBP12.5□□□□□ -0.41
CMTM3-213ENST00000566756 IGIPA6NJ69 53 aa12.49□□□□□ -0.41
CMTM3-213ENST00000566756 F8W1H4 67 aa12.49□□□□□ -0.41
CMTM3-213ENST00000566756 HOXA3O43365 443 aaPredicted RBP12.49□□□□□ -0.41
CMTM3-213ENST00000566756 RIPPLY3P57055 190 aa12.49□□□□□ -0.41
CMTM3-213ENST00000566756 C9orf85Q96MD7 179 aa12.49□□□□□ -0.41
CMTM3-213ENST00000566756 KIR2DL4Q99706 377 aa12.49□□□□□ -0.41
CMTM3-213ENST00000566756 PRADC1Q9BSG0 188 aa12.49□□□□□ -0.41
CMTM3-213ENST00000566756 IGKV3-7A0A075B6H7 116 aa12.49□□□□□ -0.41
CMTM3-213ENST00000566756 LGALS1P09382 135 aaKnown RBP12.49□□□□□ -0.41
CMTM3-213ENST00000566756 SUMO4Q6EEV6 95 aa12.49□□□□□ -0.41
CMTM3-213ENST00000566756 ZFP2Q6ZN57 461 aa12.49□□□□□ -0.41
CMTM3-213ENST00000566756 LCNL1Q6ZST4 164 aa12.49□□□□□ -0.41
CMTM3-213ENST00000566756 TMEM86BQ8N661 226 aa12.49□□□□□ -0.41
CMTM3-213ENST00000566756 MXRA5Q9NR99 2828 aa12.48□□□□□ -0.41
CMTM3-213ENST00000566756 TRBV27A0A0K0K1C4 114 aa12.48□□□□□ -0.41
CMTM3-213ENST00000566756 CRYGDP07320 174 aa12.48□□□□□ -0.41
CMTM3-213ENST00000566756 SNRPD3P62318 126 aaKnown RBP12.48□□□□□ -0.41
CMTM3-213ENST00000566756 KRTAP1-1Q07627 177 aa12.48□□□□□ -0.41
CMTM3-213ENST00000566756 RRN3P1Q2M238 152 aa12.48□□□□□ -0.41
CMTM3-213ENST00000566756 RNF152Q8N8N0 203 aa12.48□□□□□ -0.41
CMTM3-213ENST00000566756 SYT8Q8NBV8 401 aa12.48□□□□□ -0.41
CMTM3-213ENST00000566756 TMEM238LA0A1B0GVL6 79 aa12.47□□□□□ -0.41
CMTM3-213ENST00000566756 A6NJY4 79 aa12.47□□□□□ -0.41
CMTM3-213ENST00000566756 DUSP14O95147 198 aaKnown RBP12.47□□□□□ -0.41
CMTM3-213ENST00000566756 HERVK_113P61574 105 aa12.47□□□□□ -0.41
CMTM3-213ENST00000566756 PMVKQ15126 192 aa12.47□□□□□ -0.41
CMTM3-213ENST00000566756 TLN2Q9Y4G6 2542 aa12.47□□□□□ -0.41
CMTM3-213ENST00000566756 A0A0J9YX75 114 aa12.47□□□□□ -0.41
CMTM3-213ENST00000566756 CD7P09564 240 aa12.47□□□□□ -0.41
CMTM3-213ENST00000566756 TP53TG1Q9Y2A0 90 aa12.47□□□□□ -0.41
CMTM3-213ENST00000566756 MUC4Q99102 2169 aa12.46□□□□□ -0.41
CMTM3-213ENST00000566756 ZNF469Q96JG9 3925 aaPredicted RBP12.46□□□□□ -0.41
CMTM3-213ENST00000566756 IGHV3-16A0A0C4DH30 117 aa12.46□□□□□ -0.41
CMTM3-213ENST00000566756 TSHBP01222 138 aa12.46□□□□□ -0.41
CMTM3-213ENST00000566756 IGLV4-69A0A075B6H9 119 aa12.45□□□□□ -0.42
CMTM3-213ENST00000566756 K7EQG2 157 aa12.45□□□□□ -0.42
CMTM3-213ENST00000566756 SRD5A1P18405 259 aa12.45□□□□□ -0.42
CMTM3-213ENST00000566756 SCGB2A2Q13296 93 aa12.45□□□□□ -0.42
CMTM3-213ENST00000566756 ZNF702PQ9H963 129 aa12.45□□□□□ -0.42
CMTM3-213ENST00000566756 FASNP49327 2511 aaKnown RBP12.45□□□□□ -0.42
CMTM3-213ENST00000566756 TRAV12-3A0A0B4J271 114 aa12.45□□□□□ -0.42
CMTM3-213ENST00000566756 ZNF815PA8K554 130 aa12.45□□□□□ -0.42
CMTM3-213ENST00000566756 TMEM95Q3KNT9 176 aa12.45□□□□□ -0.42
CMTM3-213ENST00000566756 Q8N2B8 174 aa12.45□□□□□ -0.42
CMTM3-213ENST00000566756 SDHAF1A6NFY7 115 aa12.44□□□□□ -0.42
CMTM3-213ENST00000566756 RHOHQ15669 191 aa12.44□□□□□ -0.42
CMTM3-213ENST00000566756 C11orf86A6NJI1 115 aa12.43□□□□□ -0.42
CMTM3-213ENST00000566756 EDN2P20800 178 aa12.43□□□□□ -0.42
CMTM3-213ENST00000566756 NSUN5P1Q3KNT7 163 aa12.43□□□□□ -0.42
CMTM3-213ENST00000566756 JPT2Q9H910 190 aa12.43□□□□□ -0.42
CMTM3-213ENST00000566756 F5H697 171 aa12.42□□□□□ -0.42
CMTM3-213ENST00000566756 UBE2D1P51668 147 aa12.42□□□□□ -0.42
CMTM3-213ENST00000566756 ZNF876PQ49A33 203 aa12.42□□□□□ -0.42
CMTM3-213ENST00000566756 SPANXB1Q9NS25 103 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms