RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 IGHV3-38A0A0C4DH36 116 aa13.13□□□□□ -0.31
CCDC113-204ENST00000566498 A0A1B0GVG6 124 aa13.13□□□□□ -0.31
CCDC113-204ENST00000566498 K7EP13 123 aa13.13□□□□□ -0.31
CCDC113-204ENST00000566498 CRYGDP07320 174 aa13.13□□□□□ -0.31
CCDC113-204ENST00000566498 DNAH10OSP0CZ25 163 aa13.13□□□□□ -0.31
CCDC113-204ENST00000566498 BCL2P10415 239 aa13.13□□□□□ -0.31
CCDC113-204ENST00000566498 MUC21A0A0G2JKD1 596 aa13.12□□□□□ -0.31
CCDC113-204ENST00000566498 MUC21A0A140T8X8 626 aa13.12□□□□□ -0.31
CCDC113-204ENST00000566498 MED14OSP0DP75 135 aa13.12□□□□□ -0.31
CCDC113-204ENST00000566498 TAGLN2P37802 199 aaKnown RBP13.12□□□□□ -0.31
CCDC113-204ENST00000566498 BLOC1S1P78537 153 aa13.12□□□□□ -0.31
CCDC113-204ENST00000566498 NFE4Q86UQ8 179 aa13.12□□□□□ -0.31
CCDC113-204ENST00000566498 Q9UF83 564 aa13.12□□□□□ -0.31
CCDC113-204ENST00000566498 CXCL1P09341 107 aa13.11□□□□□ -0.31
CCDC113-204ENST00000566498 NKX2-5P52952 324 aaPredicted RBP13.11□□□□□ -0.31
CCDC113-204ENST00000566498 LELP1Q5T871 98 aa13.11□□□□□ -0.31
CCDC113-204ENST00000566498 SPANXN1Q5VSR9 72 aa13.11□□□□□ -0.31
CCDC113-204ENST00000566498 OR10AG1Q8NH19 301 aa13.11□□□□□ -0.31
CCDC113-204ENST00000566498 MSRB1Q9NZV6 116 aa13.11□□□□□ -0.31
CCDC113-204ENST00000566498 BOLA1Q9Y3E2 137 aa13.11□□□□□ -0.31
CCDC113-204ENST00000566498 C16orf90A8MZG2 172 aa13.1□□□□□ -0.31
CCDC113-204ENST00000566498 IGLV2-8P01709 118 aa13.1□□□□□ -0.31
CCDC113-204ENST00000566498 C10orf126Q8N4M7 172 aa13.1□□□□□ -0.31
CCDC113-204ENST00000566498 SPATA12Q7Z6I5 190 aa13.09□□□□□ -0.31
CCDC113-204ENST00000566498 OR2D3Q8NGH3 330 aa13.09□□□□□ -0.31
CCDC113-204ENST00000566498 SSBP4Q9BWG4 385 aaPredicted RBP13.09□□□□□ -0.31
CCDC113-204ENST00000566498 OR5AL1P0C617 328 aa13.08□□□□□ -0.32
CCDC113-204ENST00000566498 Q6ZRN7 208 aaPredicted RBP13.08□□□□□ -0.32
CCDC113-204ENST00000566498 SMIM12Q96EX1 92 aa13.08□□□□□ -0.32
CCDC113-204ENST00000566498 TPPP3Q9BW30 176 aa13.08□□□□□ -0.32
CCDC113-204ENST00000566498 BIN3Q9NQY0 253 aa13.08□□□□□ -0.32
CCDC113-204ENST00000566498 EREGO14944 169 aa13.07□□□□□ -0.32
CCDC113-204ENST00000566498 SNAI2O43623 268 aa13.07□□□□□ -0.32
CCDC113-204ENST00000566498 P01737 135 aa13.07□□□□□ -0.32
CCDC113-204ENST00000566498 IGHV3-30P01768 117 aa13.07□□□□□ -0.32
CCDC113-204ENST00000566498 IGHV3-33P01772 117 aa13.07□□□□□ -0.32
CCDC113-204ENST00000566498 IGHV3-30-3P0DP02 117 aa13.07□□□□□ -0.32
CCDC113-204ENST00000566498 IGHV3-30-5P0DP03 117 aa13.07□□□□□ -0.32
CCDC113-204ENST00000566498 GZMBP10144 247 aa13.07□□□□□ -0.32
CCDC113-204ENST00000566498 RPS20P60866 119 aaKnown RBP13.07□□□□□ -0.32
CCDC113-204ENST00000566498 LINC01556Q5JQF7 62 aa13.07□□□□□ -0.32
CCDC113-204ENST00000566498 RBFOX3A6NFN3 312 aa13.06□□□□□ -0.32
CCDC113-204ENST00000566498 F5H697 171 aa13.06□□□□□ -0.32
CCDC113-204ENST00000566498 RAB4BP61018 213 aa13.06□□□□□ -0.32
CCDC113-204ENST00000566498 ZNF56Q15929 161 aa13.06□□□□□ -0.32
CCDC113-204ENST00000566498 TRBV20OR9-2A0A075B6H5 130 aa13.05□□□□□ -0.32
CCDC113-204ENST00000566498 A0A087WWC5 75 aa13.05□□□□□ -0.32
CCDC113-204ENST00000566498 XKRY2A2RUG3 117 aa13.05□□□□□ -0.32
CCDC113-204ENST00000566498 C19orf71A6NCJ1 209 aa13.05□□□□□ -0.32
CCDC113-204ENST00000566498 SMIM17P0DL12 118 aa13.05□□□□□ -0.32
CCDC113-204ENST00000566498 RPL36AP83881 106 aaKnown RBP13.05□□□□□ -0.32
CCDC113-204ENST00000566498 FER1L6-AS1Q8NA97 138 aa13.05□□□□□ -0.32
CCDC113-204ENST00000566498 RPL36ALQ969Q0 106 aaKnown RBP13.05□□□□□ -0.32
CCDC113-204ENST00000566498 PKHD1P08F94 4074 aa13.05□□□□□ -0.32
CCDC113-204ENST00000566498 TRBV10-1A0A0K0K1A3 114 aa13.04□□□□□ -0.32
CCDC113-204ENST00000566498 LINC00694P0DN24 101 aa13.04□□□□□ -0.32
CCDC113-204ENST00000566498 ERVFC1-1P60608 527 aa13.04□□□□□ -0.32
CCDC113-204ENST00000566498 TRBV7-3A0A075B6L6 115 aa13.03□□□□□ -0.32
CCDC113-204ENST00000566498 IBA57-AS1B1ANH7 110 aa13.03□□□□□ -0.32
CCDC113-204ENST00000566498 OCC1Q8TAD7 63 aa13.03□□□□□ -0.32
CCDC113-204ENST00000566498 PSCAO43653 123 aa13.02□□□□□ -0.33
CCDC113-204ENST00000566498 CEBPGP53567 150 aa13.02□□□□□ -0.33
CCDC113-204ENST00000566498 KRTAP10-2P60368 255 aa13.02□□□□□ -0.33
CCDC113-204ENST00000566498 NUDT10Q8NFP7 164 aa13.02□□□□□ -0.33
CCDC113-204ENST00000566498 LYPD6BQ8NI32 183 aa13.02□□□□□ -0.33
CCDC113-204ENST00000566498 NUDT11Q96G61 164 aa13.02□□□□□ -0.33
CCDC113-204ENST00000566498 EIF5A2Q9GZV4 153 aaKnown RBP13.02□□□□□ -0.33
CCDC113-204ENST00000566498 Q9HAA7 133 aa13.02□□□□□ -0.33
CCDC113-204ENST00000566498 F2Z2F3 143 aa13.01□□□□□ -0.33
CCDC113-204ENST00000566498 IGLC6P0CF74 106 aa13.01□□□□□ -0.33
CCDC113-204ENST00000566498 CACNG7P62955 275 aa13.01□□□□□ -0.33
CCDC113-204ENST00000566498 AP1S3Q96PC3 154 aa13.01□□□□□ -0.33
CCDC113-204ENST00000566498 URGCP-MRPS24S4R325 110 aa13□□□□□ -0.33
CCDC113-204ENST00000566498 TMEM250H0YL14 139 aa12.99□□□□□ -0.33
CCDC113-204ENST00000566498 UBE2D3P61077 147 aa12.99□□□□□ -0.33
CCDC113-204ENST00000566498 UBE2D2P62837 147 aa12.99□□□□□ -0.33
CCDC113-204ENST00000566498 TOR2AQ5JU69 321 aa12.99□□□□□ -0.33
CCDC113-204ENST00000566498 LYZL1Q6UWQ5 148 aa12.99□□□□□ -0.33
CCDC113-204ENST00000566498 Q8N3U1 123 aa12.99□□□□□ -0.33
CCDC113-204ENST00000566498 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.99□□□□□ -0.33
CCDC113-204ENST00000566498 RNASE7Q9H1E1 156 aaKnown RBP12.99□□□□□ -0.33
CCDC113-204ENST00000566498 PGPEP1Q9NXJ5 209 aa12.99□□□□□ -0.33
CCDC113-204ENST00000566498 A0A087WTM6 91 aa12.98□□□□□ -0.33
CCDC113-204ENST00000566498 K7EN84 100 aa12.98□□□□□ -0.33
CCDC113-204ENST00000566498 MGPP08493 103 aa12.98□□□□□ -0.33
CCDC113-204ENST00000566498 NEXN-AS1Q8NBZ9 246 aa12.98□□□□□ -0.33
CCDC113-204ENST00000566498 KIF25-AS1Q9Y6Z4 181 aa12.98□□□□□ -0.33
CCDC113-204ENST00000566498 KCNIP4Q6PIL6 250 aa12.97□□□□□ -0.33
CCDC113-204ENST00000566498 DAZ4Q86SG3 579 aaKnown RBP12.97□□□□□ -0.33
CCDC113-204ENST00000566498 OR10G8Q8NGN5 311 aa12.97□□□□□ -0.33
CCDC113-204ENST00000566498 RPP21Q9H633 154 aaKnown RBP12.97□□□□□ -0.33
CCDC113-204ENST00000566498 DAZ3Q9NR90 486 aaKnown RBP12.97□□□□□ -0.33
CCDC113-204ENST00000566498 DNAH11Q96DT5 4516 aa12.97□□□□□ -0.33
CCDC113-204ENST00000566498 NTF3P20783 257 aa12.96□□□□□ -0.33
CCDC113-204ENST00000566498 FUSP35637 526 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCDC113-204ENST00000566498 DYNC1H1Q14204 4646 aaKnown RBP12.96□□□□□ -0.34
CCDC113-204ENST00000566498 KIAA1109Q2LD37 5005 aa12.95□□□□□ -0.34
CCDC113-204ENST00000566498 A0A087WX48 190 aa12.95□□□□□ -0.34
CCDC113-204ENST00000566498 TMEM262E9PQX1 116 aa12.95□□□□□ -0.34
CCDC113-204ENST00000566498 TRGC1P0CF51 173 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms