RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 RNASE1P07998 156 aaKnown RBP9.9□□□□□ -0.82
LINC00563-201ENST00000566370 DEFB114Q30KQ6 69 aa9.9□□□□□ -0.82
LINC00563-201ENST00000566370 ZNF876PQ49A33 203 aa9.9□□□□□ -0.82
LINC00563-201ENST00000566370 ZC2HC1BQ5TFG8 222 aa9.9□□□□□ -0.82
LINC00563-201ENST00000566370 ADAMTSL5Q6ZMM2 481 aa9.9□□□□□ -0.82
LINC00563-201ENST00000566370 C18orf65Q6ZTR6 163 aa9.9□□□□□ -0.82
LINC00563-201ENST00000566370 LINC00467Q9BRT7 94 aa9.9□□□□□ -0.82
LINC00563-201ENST00000566370 MAP6D1Q9H9H5 199 aa9.9□□□□□ -0.82
LINC00563-201ENST00000566370 MRPL35Q9NZE8 188 aaKnown RBP9.9□□□□□ -0.82
LINC00563-201ENST00000566370 HIGD1BQ9P298 99 aa9.9□□□□□ -0.82
LINC00563-201ENST00000566370 SDHAF1A6NFY7 115 aa9.9□□□□□ -0.83
LINC00563-201ENST00000566370 A8MWV9 139 aa9.9□□□□□ -0.83
LINC00563-201ENST00000566370 SPRY2O43597 315 aa9.9□□□□□ -0.83
LINC00563-201ENST00000566370 FGF6P10767 208 aa9.9□□□□□ -0.83
LINC00563-201ENST00000566370 LINC00315P59091 139 aa9.9□□□□□ -0.83
LINC00563-201ENST00000566370 RHOHQ15669 191 aa9.9□□□□□ -0.83
LINC00563-201ENST00000566370 PTH2Q96A98 100 aa9.9□□□□□ -0.83
LINC00563-201ENST00000566370 SPXQ9BT56 116 aa9.9□□□□□ -0.83
LINC00563-201ENST00000566370 MDFICQ9P1T7 246 aa9.9□□□□□ -0.83
LINC00563-201ENST00000566370 USP9YO00507 2555 aaPredicted RBP9.89□□□□□ -0.83
LINC00563-201ENST00000566370 CCL24O00175 119 aa9.89□□□□□ -0.83
LINC00563-201ENST00000566370 POLR2KP53803 58 aaKnown RBP9.89□□□□□ -0.83
LINC00563-201ENST00000566370 HERVK_113P61574 105 aa9.89□□□□□ -0.83
LINC00563-201ENST00000566370 C2orf91Q6ZV80 131 aa9.89□□□□□ -0.83
LINC00563-201ENST00000566370 ZNF256Q9Y2P7 627 aaPredicted RBP9.89□□□□□ -0.83
LINC00563-201ENST00000566370 PTPN13Q12923 2485 aa9.88□□□□□ -0.83
LINC00563-201ENST00000566370 COL12A1Q99715 3063 aa9.88□□□□□ -0.83
LINC00563-201ENST00000566370 TRBV27A0A0K0K1C4 114 aa9.88□□□□□ -0.83
LINC00563-201ENST00000566370 M0R2P5 195 aa9.88□□□□□ -0.83
LINC00563-201ENST00000566370 RHODO00212 210 aa9.88□□□□□ -0.83
LINC00563-201ENST00000566370 ZFP2Q6ZN57 461 aa9.88□□□□□ -0.83
LINC00563-201ENST00000566370 STHQ8IWL8 128 aa9.88□□□□□ -0.83
LINC00563-201ENST00000566370 NEXN-AS1Q8NBZ9 246 aa9.88□□□□□ -0.83
LINC00563-201ENST00000566370 TIMM17AQ99595 171 aa9.88□□□□□ -0.83
LINC00563-201ENST00000566370 EDA2RQ9HAV5 297 aa9.88□□□□□ -0.83
LINC00563-201ENST00000566370 HHLA3Q9XRX5 114 aa9.88□□□□□ -0.83
LINC00563-201ENST00000566370 OR11H12B2RN74 326 aa9.87□□□□□ -0.83
LINC00563-201ENST00000566370 RIPPLY3P57055 190 aa9.87□□□□□ -0.83
LINC00563-201ENST00000566370 FHL3Q13643 280 aa9.87□□□□□ -0.83
LINC00563-201ENST00000566370 CD300EQ496F6 205 aaPredicted RBP9.87□□□□□ -0.83
LINC00563-201ENST00000566370 GTSCR1Q86UQ5 136 aa9.87□□□□□ -0.83
LINC00563-201ENST00000566370 OR11H2Q8NH07 326 aa9.87□□□□□ -0.83
LINC00563-201ENST00000566370 KRTAP3-3Q9BYR6 98 aa9.87□□□□□ -0.83
LINC00563-201ENST00000566370 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
LINC00563-201ENST00000566370 JPT2Q9H910 190 aa9.87□□□□□ -0.83
LINC00563-201ENST00000566370 TP53TG1Q9Y2A0 90 aa9.87□□□□□ -0.83
LINC00563-201ENST00000566370 I3L3M4 83 aa9.86□□□□□ -0.83
LINC00563-201ENST00000566370 CRYGDP07320 174 aa9.86□□□□□ -0.83
LINC00563-201ENST00000566370 VAMP3Q15836 100 aa9.86□□□□□ -0.83
LINC00563-201ENST00000566370 BAALCQ8WXS3 180 aa9.86□□□□□ -0.83
LINC00563-201ENST00000566370 LINC01587Q99440 93 aa9.86□□□□□ -0.83
LINC00563-201ENST00000566370 UTP20O75691 2785 aaKnown RBP9.86□□□□□ -0.83
LINC00563-201ENST00000566370 POLQO75417 2590 aa9.85□□□□□ -0.83
LINC00563-201ENST00000566370 A0A1W2PRX2 142 aa9.85□□□□□ -0.83
LINC00563-201ENST00000566370 M0QY20 66 aa9.85□□□□□ -0.83
LINC00563-201ENST00000566370 HTN1P15515 57 aa9.85□□□□□ -0.83
LINC00563-201ENST00000566370 PTTG1IPP53801 180 aa9.85□□□□□ -0.83
LINC00563-201ENST00000566370 PMVKQ15126 192 aa9.85□□□□□ -0.83
LINC00563-201ENST00000566370 TAL2Q16559 108 aa9.85□□□□□ -0.83
LINC00563-201ENST00000566370 NSUN5P1Q3KNT7 163 aa9.85□□□□□ -0.83
LINC00563-201ENST00000566370 NDUFA7O95182 113 aa9.84□□□□□ -0.83
LINC00563-201ENST00000566370 CD28P10747 220 aa9.84□□□□□ -0.83
LINC00563-201ENST00000566370 TCTAP57738 103 aa9.84□□□□□ -0.83
LINC00563-201ENST00000566370 PCP2Q8IVA1 136 aa9.84□□□□□ -0.83
LINC00563-201ENST00000566370 MUC4Q99102 2169 aa9.84□□□□□ -0.83
LINC00563-201ENST00000566370 ASH1LQ9NR48 2969 aaKnown RBP9.84□□□□□ -0.83
LINC00563-201ENST00000566370 HILS1P60008 231 aa9.83□□□□□ -0.84
LINC00563-201ENST00000566370 UBE2V1Q13404 147 aa9.83□□□□□ -0.84
LINC00563-201ENST00000566370 LINC01006Q8NI28 216 aa9.83□□□□□ -0.84
LINC00563-201ENST00000566370 CHAC1Q9BUX1 264 aa9.83□□□□□ -0.84
LINC00563-201ENST00000566370 ESM1Q9NQ30 184 aa9.83□□□□□ -0.84
LINC00563-201ENST00000566370 TP73-AS1Q9UF72 201 aa9.83□□□□□ -0.84
LINC00563-201ENST00000566370 TNFRSF18Q9Y5U5 241 aa9.83□□□□□ -0.84
LINC00563-201ENST00000566370 EPG5Q9HCE0 2579 aa9.83□□□□□ -0.84
LINC00563-201ENST00000566370 PRSS29PA6NIE9 313 aa9.82□□□□□ -0.84
LINC00563-201ENST00000566370 H3BRM9 83 aa9.82□□□□□ -0.84
LINC00563-201ENST00000566370 TAX1BP3O14907 124 aa9.82□□□□□ -0.84
LINC00563-201ENST00000566370 KRTAP1-1Q07627 177 aa9.82□□□□□ -0.84
LINC00563-201ENST00000566370 HIST2H2BCQ6DN03 193 aa9.82□□□□□ -0.84
LINC00563-201ENST00000566370 NEGR1Q7Z3B1 354 aa9.82□□□□□ -0.84
LINC00563-201ENST00000566370 DNAJC30Q96LL9 226 aa9.82□□□□□ -0.84
LINC00563-201ENST00000566370 CITED2Q99967 270 aaPredicted RBP9.82□□□□□ -0.84
LINC00563-201ENST00000566370 TRAV8-6A0A0B4J262 113 aa9.82□□□□□ -0.84
LINC00563-201ENST00000566370 ABCA12Q86UK0 2595 aa9.81□□□□□ -0.84
LINC00563-201ENST00000566370 DOPEY2Q9Y3R5 2298 aa9.81□□□□□ -0.84
LINC00563-201ENST00000566370 TRBV25-1A0A075B6N4 114 aa9.81□□□□□ -0.84
LINC00563-201ENST00000566370 RBMY1BA6NDE4 496 aaKnown RBP9.81□□□□□ -0.84
LINC00563-201ENST00000566370 RBMY1EA6NEQ0 496 aaKnown RBP9.81□□□□□ -0.84
LINC00563-201ENST00000566370 E9PLD3 99 aa9.81□□□□□ -0.84
LINC00563-201ENST00000566370 SAP30O75446 220 aa9.81□□□□□ -0.84
LINC00563-201ENST00000566370 NPSP0C0P6 89 aa9.81□□□□□ -0.84
LINC00563-201ENST00000566370 RBMY1DP0C7P1 496 aaKnown RBP9.81□□□□□ -0.84
LINC00563-201ENST00000566370 RBMY1A1P0DJD3 496 aaKnown RBP9.81□□□□□ -0.84
LINC00563-201ENST00000566370 RBMY1CP0DJD4 496 aa9.81□□□□□ -0.84
LINC00563-201ENST00000566370 RBMY1FQ15415 496 aaKnown RBP9.81□□□□□ -0.84
LINC00563-201ENST00000566370 C11orf44Q8N8P7 122 aa9.81□□□□□ -0.84
LINC00563-201ENST00000566370 OR4C5Q8NGB2 326 aa9.81□□□□□ -0.84
LINC00563-201ENST00000566370 FAM110AQ9BQ89 295 aa9.81□□□□□ -0.84
LINC00563-201ENST00000566370 IGKV2D-26A0A0A0MRZ7 120 aa9.8□□□□□ -0.84
LINC00563-201ENST00000566370 MYMXA0A1B0GTQ4 84 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms