RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 MGPP08493 103 aa21.94■■□□□ 1.1
CTCF-203ENST00000566078 KIF25-AS1Q9Y6Z4 181 aa21.94■■□□□ 1.1
CTCF-203ENST00000566078 DEFB121Q5J5C9 76 aa21.93■■□□□ 1.1
CTCF-203ENST00000566078 FAM74A4Q5TZK3 123 aa21.93■■□□□ 1.1
CTCF-203ENST00000566078 RASL10AQ92737 203 aa21.93■■□□□ 1.1
CTCF-203ENST00000566078 RETNQ9HD89 108 aa21.93■■□□□ 1.1
CTCF-203ENST00000566078 Q6ZTI0 123 aa21.92■■□□□ 1.1
CTCF-203ENST00000566078 OVOL2Q9BRP0 275 aa21.92■■□□□ 1.1
CTCF-203ENST00000566078 SAMD10Q9BYL1 202 aa21.92■■□□□ 1.1
CTCF-203ENST00000566078 TP53TG1Q9Y2A0 90 aa21.92■■□□□ 1.1
CTCF-203ENST00000566078 MIFP14174 115 aa21.91■■□□□ 1.1
CTCF-203ENST00000566078 LGALS9BQ3B8N2 356 aa21.91■■□□□ 1.1
CTCF-203ENST00000566078 IGHV4-28A0A0C4DH34 117 aa21.91■■□□□ 1.1
CTCF-203ENST00000566078 A8MWV9 139 aa21.91■■□□□ 1.1
CTCF-203ENST00000566078 D6R8Y8 96 aa21.91■■□□□ 1.1
CTCF-203ENST00000566078 ALKBH7Q9BT30 221 aaPredicted RBP21.91■■□□□ 1.1
CTCF-203ENST00000566078 NDUFAF3Q9BU61 184 aa21.91■■□□□ 1.1
CTCF-203ENST00000566078 SMKR1H3BMG3 65 aa21.9■■□□□ 1.1
CTCF-203ENST00000566078 NCR2O95944 276 aa21.9■■□□□ 1.1
CTCF-203ENST00000566078 CRYGDP07320 174 aa21.89■■□□□ 1.09
CTCF-203ENST00000566078 CKS2P33552 79 aa21.89■■□□□ 1.09
CTCF-203ENST00000566078 Q8NAQ8 132 aa21.89■■□□□ 1.09
CTCF-203ENST00000566078 LINC00315P59091 139 aa21.88■■□□□ 1.09
CTCF-203ENST00000566078 ORMDL3Q8N138 153 aa21.88■■□□□ 1.09
CTCF-203ENST00000566078 TRAV26-2A0A0B4J265 109 aa21.88■■□□□ 1.09
CTCF-203ENST00000566078 CFAP126Q5VTH2 177 aa21.88■■□□□ 1.09
CTCF-203ENST00000566078 U3KQK5 164 aa21.88■■□□□ 1.09
CTCF-203ENST00000566078 DEFB4AO15263 64 aa21.87■■□□□ 1.09
CTCF-203ENST00000566078 SBSPONQ8IVN8 264 aa21.87■■□□□ 1.09
CTCF-203ENST00000566078 RS1O15537 224 aa21.86■■□□□ 1.09
CTCF-203ENST00000566078 ZNF56Q15929 161 aa21.86■■□□□ 1.09
CTCF-203ENST00000566078 PRELID3AQ96N28 172 aa21.86■■□□□ 1.09
CTCF-203ENST00000566078 GAGE12BA1L429 117 aa21.85■■□□□ 1.09
CTCF-203ENST00000566078 GAGE7O76087 117 aa21.85■■□□□ 1.09
CTCF-203ENST00000566078 GAGE12FP0CL80 117 aa21.85■■□□□ 1.09
CTCF-203ENST00000566078 GAGE12GP0CL81 117 aa21.85■■□□□ 1.09
CTCF-203ENST00000566078 GAGE12IP0CL82 117 aa21.85■■□□□ 1.09
CTCF-203ENST00000566078 POM121L12Q8N7R1 296 aa21.85■■□□□ 1.09
CTCF-203ENST00000566078 MRAP2Q96G30 205 aa21.85■■□□□ 1.09
CTCF-203ENST00000566078 F5H697 171 aa21.84■■□□□ 1.09
CTCF-203ENST00000566078 GAS8-AS1O95177 125 aa21.84■■□□□ 1.09
CTCF-203ENST00000566078 PPBPP02775 128 aa21.84■■□□□ 1.09
CTCF-203ENST00000566078 IGHV3-73A0A0B4J1V6 119 aa21.84■■□□□ 1.09
CTCF-203ENST00000566078 NDUFA6P56556 154 aa21.84■■□□□ 1.09
CTCF-203ENST00000566078 SUMO4Q6EEV6 95 aa21.83■■□□□ 1.08
CTCF-203ENST00000566078 UFSP1Q6NVU6 142 aa21.83■■□□□ 1.08
CTCF-203ENST00000566078 MRAPQ8TCY5 172 aa21.83■■□□□ 1.08
CTCF-203ENST00000566078 S100A6P06703 90 aa21.82■■□□□ 1.08
CTCF-203ENST00000566078 GATA1P15976 413 aaPredicted RBP21.82■■□□□ 1.08
CTCF-203ENST00000566078 IQCJQ1A5X6 159 aa21.82■■□□□ 1.08
CTCF-203ENST00000566078 OR4C5Q8NGB2 326 aa21.82■■□□□ 1.08
CTCF-203ENST00000566078 C18orf32Q8TCD1 76 aa21.82■■□□□ 1.08
CTCF-203ENST00000566078 TRGV2A0A075B6R0 118 aa21.81■■□□□ 1.08
CTCF-203ENST00000566078 RHODO00212 210 aa21.81■■□□□ 1.08
CTCF-203ENST00000566078 FAM222AQ5U5X8 452 aa21.81■■□□□ 1.08
CTCF-203ENST00000566078 TRAV4A0A0B4J268 109 aa21.8■■□□□ 1.08
CTCF-203ENST00000566078 OR10J3Q5JRS4 329 aa21.8■■□□□ 1.08
CTCF-203ENST00000566078 LYRM9A8MSI8 78 aa21.8■■□□□ 1.08
CTCF-203ENST00000566078 NPYP01303 97 aa21.8■■□□□ 1.08
CTCF-203ENST00000566078 Q0VG73 95 aa21.79■■□□□ 1.08
CTCF-203ENST00000566078 IGHV3-53P01767 116 aa21.78■■□□□ 1.08
CTCF-203ENST00000566078 DEFB130BP0DP73 79 aa21.78■■□□□ 1.08
CTCF-203ENST00000566078 DEFB130AP0DP74 79 aa21.78■■□□□ 1.08
CTCF-203ENST00000566078 LINC00612Q8N6U2 182 aa21.78■■□□□ 1.08
CTCF-203ENST00000566078 ZNF479Q96JC4 524 aa21.78■■□□□ 1.08
CTCF-203ENST00000566078 SPATA25Q9BR10 227 aa21.78■■□□□ 1.08
CTCF-203ENST00000566078 DKK2Q9UBU2 259 aa21.78■■□□□ 1.08
CTCF-203ENST00000566078 TNFRSF6BO95407 300 aa21.77■■□□□ 1.08
CTCF-203ENST00000566078 ZFP2Q6ZN57 461 aa21.77■■□□□ 1.08
CTCF-203ENST00000566078 BAGE3Q86Y29 109 aa21.77■■□□□ 1.08
CTCF-203ENST00000566078 NRACQ8N912 160 aa21.77■■□□□ 1.08
CTCF-203ENST00000566078 LAMTOR2Q9Y2Q5 125 aa21.77■■□□□ 1.08
CTCF-203ENST00000566078 TM2D3Q9BRN9 247 aa21.77■■□□□ 1.07
CTCF-203ENST00000566078 TENM3Q9P273 2699 aa21.76■■□□□ 1.07
CTCF-203ENST00000566078 RPL39LQ96EH5 51 aaKnown RBP21.76■■□□□ 1.07
CTCF-203ENST00000566078 CELA1Q9UNI1 258 aa21.75■■□□□ 1.07
CTCF-203ENST00000566078 M0QY20 66 aa21.73■■□□□ 1.07
CTCF-203ENST00000566078 SNRPEP62304 92 aaKnown RBP21.73■■□□□ 1.07
CTCF-203ENST00000566078 Q6ZSN1 163 aa21.73■■□□□ 1.07
CTCF-203ENST00000566078 LOC389332A0A1B0GUA5 103 aa21.72■■□□□ 1.07
CTCF-203ENST00000566078 COA6Q5JTJ3 125 aaKnown RBP21.72■■□□□ 1.07
CTCF-203ENST00000566078 MAP1LC3AQ9H492 121 aa21.72■■□□□ 1.07
CTCF-203ENST00000566078 SPART-AS1P0CW21 52 aa21.71■■□□□ 1.07
CTCF-203ENST00000566078 C18orf15Q96N68 181 aa21.71■■□□□ 1.07
CTCF-203ENST00000566078 C11orf68Q9H3H3 251 aaKnown RBP21.71■■□□□ 1.07
CTCF-203ENST00000566078 PPP1R17O96001 155 aa21.7■■□□□ 1.06
CTCF-203ENST00000566078 H7C1H1 209 aa21.69■■□□□ 1.06
CTCF-203ENST00000566078 SERF1AO75920 110 aa21.69■■□□□ 1.06
CTCF-203ENST00000566078 EDA2RQ9HAV5 297 aa21.69■■□□□ 1.06
CTCF-203ENST00000566078 C5orf52A6NGY3 159 aa21.69■■□□□ 1.06
CTCF-203ENST00000566078 CIDEAO60543 219 aa21.69■■□□□ 1.06
CTCF-203ENST00000566078 LINC00310P59036 64 aa21.69■■□□□ 1.06
CTCF-203ENST00000566078 DAD1P61803 113 aa21.69■■□□□ 1.06
CTCF-203ENST00000566078 TEX48A0A1B0GUV7 120 aa21.67■■□□□ 1.06
CTCF-203ENST00000566078 RNASEKQ6P5S7 137 aaKnown RBP21.67■■□□□ 1.06
CTCF-203ENST00000566078 P0DMU3 169 aa21.66■■□□□ 1.06
CTCF-203ENST00000566078 FAM231AP0DMU4 169 aa21.66■■□□□ 1.06
CTCF-203ENST00000566078 FAM231CP0DMU5 169 aa21.66■■□□□ 1.06
CTCF-203ENST00000566078 IFI27P40305 119 aaPredicted RBP21.66■■□□□ 1.06
CTCF-203ENST00000566078 NIT1Q86X76 327 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms