RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 M0R381 172 aa11.33□□□□□ -0.6
USB1-211ENST00000565662 C1QBP02746 253 aa11.33□□□□□ -0.6
USB1-211ENST00000565662 OR5AL1P0C617 328 aa11.33□□□□□ -0.6
USB1-211ENST00000565662 LINC00694P0DN24 101 aa11.33□□□□□ -0.6
USB1-211ENST00000565662 SULT1A2P50226 295 aa11.33□□□□□ -0.6
USB1-211ENST00000565662 RPL36AP83881 106 aaKnown RBP11.33□□□□□ -0.6
USB1-211ENST00000565662 RPL36ALQ969Q0 106 aaKnown RBP11.33□□□□□ -0.6
USB1-211ENST00000565662 URGCP-MRPS24S4R325 110 aa11.33□□□□□ -0.6
USB1-211ENST00000565662 TRAV8-3A0A0A6YYJ7 113 aa11.32□□□□□ -0.6
USB1-211ENST00000565662 RPS20P60866 119 aaKnown RBP11.32□□□□□ -0.6
USB1-211ENST00000565662 PKIAP61925 76 aa11.32□□□□□ -0.6
USB1-211ENST00000565662 FAM74A4Q5TZK3 123 aa11.32□□□□□ -0.6
USB1-211ENST00000565662 KCNIP4Q6PIL6 250 aa11.32□□□□□ -0.6
USB1-211ENST00000565662 NTN5Q8WTR8 489 aaPredicted RBP11.32□□□□□ -0.6
USB1-211ENST00000565662 GNG13Q9P2W3 67 aa11.32□□□□□ -0.6
USB1-211ENST00000565662 KIAA1109Q2LD37 5005 aa11.32□□□□□ -0.6
USB1-211ENST00000565662 A0A087WTM6 91 aa11.31□□□□□ -0.6
USB1-211ENST00000565662 A0A1B0GV50 99 aa11.31□□□□□ -0.6
USB1-211ENST00000565662 GRIFINA4D1Z8 144 aa11.31□□□□□ -0.6
USB1-211ENST00000565662 RPL35P42766 123 aaKnown RBP11.31□□□□□ -0.6
USB1-211ENST00000565662 MEF2BQ02080 365 aaPredicted RBP11.31□□□□□ -0.6
USB1-211ENST00000565662 ELOBQ15370 118 aa11.31□□□□□ -0.6
USB1-211ENST00000565662 RMI2Q96E14 147 aa11.31□□□□□ -0.6
USB1-211ENST00000565662 DAZAP1Q96EP5 407 aaKnown RBP11.31□□□□□ -0.6
USB1-211ENST00000565662 GAGE12JA6NER3 117 aa11.3□□□□□ -0.6
USB1-211ENST00000565662 SNAI2O43623 268 aa11.3□□□□□ -0.6
USB1-211ENST00000565662 RAB4BP61018 213 aa11.3□□□□□ -0.6
USB1-211ENST00000565662 GAGE1Q13065 139 aa11.3□□□□□ -0.6
USB1-211ENST00000565662 GAGE4Q13068 117 aa11.3□□□□□ -0.6
USB1-211ENST00000565662 GAGE5Q13069 117 aa11.3□□□□□ -0.6
USB1-211ENST00000565662 GAGE13Q4V321 117 aa11.3□□□□□ -0.6
USB1-211ENST00000565662 TMEM97Q5BJF2 176 aa11.3□□□□□ -0.6
USB1-211ENST00000565662 SPANXN1Q5VSR9 72 aa11.3□□□□□ -0.6
USB1-211ENST00000565662 TRBV7-3A0A075B6L6 115 aa11.29□□□□□ -0.6
USB1-211ENST00000565662 TMSB15BA0A087X1C1 80 aa11.29□□□□□ -0.6
USB1-211ENST00000565662 SMIM17P0DL12 118 aa11.29□□□□□ -0.6
USB1-211ENST00000565662 AP1S3Q96PC3 154 aa11.29□□□□□ -0.6
USB1-211ENST00000565662 SSBP4Q9BWG4 385 aaPredicted RBP11.29□□□□□ -0.6
USB1-211ENST00000565662 DYNC1H1Q14204 4646 aaKnown RBP11.29□□□□□ -0.6
USB1-211ENST00000565662 GNG4P50150 75 aa11.28□□□□□ -0.6
USB1-211ENST00000565662 KRTAP10-2P60368 255 aa11.28□□□□□ -0.6
USB1-211ENST00000565662 CCL20P78556 96 aa11.28□□□□□ -0.6
USB1-211ENST00000565662 PRR27Q6MZM9 219 aa11.28□□□□□ -0.6
USB1-211ENST00000565662 AKAP14Q86UN6 197 aa11.28□□□□□ -0.6
USB1-211ENST00000565662 BCL2P10415 239 aa11.27□□□□□ -0.61
USB1-211ENST00000565662 ZNF56Q15929 161 aa11.27□□□□□ -0.61
USB1-211ENST00000565662 OR10G8Q8NGN5 311 aa11.27□□□□□ -0.61
USB1-211ENST00000565662 SAMD10Q9BYL1 202 aa11.27□□□□□ -0.61
USB1-211ENST00000565662 VAX2Q9UIW0 290 aa11.27□□□□□ -0.61
USB1-211ENST00000565662 A0A087WWL8 130 aa11.26□□□□□ -0.61
USB1-211ENST00000565662 H7C1H1 209 aa11.26□□□□□ -0.61
USB1-211ENST00000565662 CENPWQ5EE01 88 aa11.26□□□□□ -0.61
USB1-211ENST00000565662 C14orf178Q8N769 122 aaPredicted RBP11.26□□□□□ -0.61
USB1-211ENST00000565662 MAPKAPK5-AS1Q8N8E1 139 aa11.26□□□□□ -0.61
USB1-211ENST00000565662 JPT2Q9H910 190 aa11.26□□□□□ -0.61
USB1-211ENST00000565662 F2Z2F3 143 aa11.25□□□□□ -0.61
USB1-211ENST00000565662 IGHV3-30P01768 117 aa11.25□□□□□ -0.61
USB1-211ENST00000565662 IGHV3-33P01772 117 aa11.25□□□□□ -0.61
USB1-211ENST00000565662 IGHV3-30-3P0DP02 117 aa11.25□□□□□ -0.61
USB1-211ENST00000565662 IGHV3-30-5P0DP03 117 aa11.25□□□□□ -0.61
USB1-211ENST00000565662 CACNG7P62955 275 aa11.25□□□□□ -0.61
USB1-211ENST00000565662 Q6ZNX1 250 aa11.25□□□□□ -0.61
USB1-211ENST00000565662 Q6ZSN1 163 aa11.25□□□□□ -0.61
USB1-211ENST00000565662 A0A087WX48 190 aa11.24□□□□□ -0.61
USB1-211ENST00000565662 UBE2D3P61077 147 aa11.24□□□□□ -0.61
USB1-211ENST00000565662 UBE2D2P62837 147 aa11.24□□□□□ -0.61
USB1-211ENST00000565662 BLOC1S1P78537 153 aa11.24□□□□□ -0.61
USB1-211ENST00000565662 OR10AG1Q8NH19 301 aa11.24□□□□□ -0.61
USB1-211ENST00000565662 Q9HAA7 133 aa11.24□□□□□ -0.61
USB1-211ENST00000565662 RBFOX3A6NFN3 312 aa11.23□□□□□ -0.61
USB1-211ENST00000565662 P01737 135 aa11.23□□□□□ -0.61
USB1-211ENST00000565662 TRGC1P0CF51 173 aa11.23□□□□□ -0.61
USB1-211ENST00000565662 Q0VG73 95 aa11.23□□□□□ -0.61
USB1-211ENST00000565662 DAZ4Q86SG3 579 aaKnown RBP11.23□□□□□ -0.61
USB1-211ENST00000565662 Q8N1X5 172 aa11.23□□□□□ -0.61
USB1-211ENST00000565662 FER1L6-AS1Q8NA97 138 aa11.23□□□□□ -0.61
USB1-211ENST00000565662 DAZ3Q9NR90 486 aaKnown RBP11.23□□□□□ -0.61
USB1-211ENST00000565662 MED9Q9NWA0 146 aa11.23□□□□□ -0.61
USB1-211ENST00000565662 TNFRSF18Q9Y5U5 241 aa11.23□□□□□ -0.61
USB1-211ENST00000565662 RPL19P84098 196 aaKnown RBP11.22□□□□□ -0.61
USB1-211ENST00000565662 NIT1Q86X76 327 aa11.22□□□□□ -0.61
USB1-211ENST00000565662 IGLV5-52A0A0A0MRZ9 124 aa11.21□□□□□ -0.61
USB1-211ENST00000565662 NDUFS6O75380 124 aaKnown RBP11.21□□□□□ -0.61
USB1-211ENST00000565662 GCSHP23434 173 aa11.21□□□□□ -0.61
USB1-211ENST00000565662 Q8N814 137 aa11.21□□□□□ -0.61
USB1-211ENST00000565662 OR2D3Q8NGH3 330 aa11.21□□□□□ -0.61
USB1-211ENST00000565662 DNAJC30Q96LL9 226 aa11.21□□□□□ -0.61
USB1-211ENST00000565662 DERL1Q9BUN8 251 aa11.21□□□□□ -0.61
USB1-211ENST00000565662 TRBV6-8A0A0A6YYG3 113 aa11.2□□□□□ -0.62
USB1-211ENST00000565662 C19orf71A6NCJ1 209 aa11.2□□□□□ -0.62
USB1-211ENST00000565662 F5H697 171 aa11.2□□□□□ -0.62
USB1-211ENST00000565662 TMEM250H0YL14 139 aa11.2□□□□□ -0.62
USB1-211ENST00000565662 WDR73Q6P4I2 378 aa11.2□□□□□ -0.62
USB1-211ENST00000565662 LRP1BQ9NZR2 4599 aa11.2□□□□□ -0.62
USB1-211ENST00000565662 LRCOL1A6NCL2 159 aa11.19□□□□□ -0.62
USB1-211ENST00000565662 IGLC6P0CF74 106 aa11.19□□□□□ -0.62
USB1-211ENST00000565662 NEXN-AS1Q8NBZ9 246 aa11.19□□□□□ -0.62
USB1-211ENST00000565662 TMEM70Q9BUB7 260 aa11.19□□□□□ -0.62
USB1-211ENST00000565662 RYR1P21817 5038 aa11.18□□□□□ -0.62
USB1-211ENST00000565662 CRPP02741 224 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 1441.1 ms