RNA–Protein interactions for RNA: ENST00000564674.5

DENND4A-206, Transcript of DENN domain containing 4A, humanhuman

TSL 1 (best)

Gene DENND4A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-206ENST00000564674 SIRPDQ9H106 197 aa13.88□□□□□ -0.19
DENND4A-206ENST00000564674 CENPVL3A0A0U1RRI6 287 aa13.88□□□□□ -0.19
DENND4A-206ENST00000564674 NPC2P61916 151 aa13.88□□□□□ -0.19
DENND4A-206ENST00000564674 GPHB5Q86YW7 130 aa13.88□□□□□ -0.19
DENND4A-206ENST00000564674 CARD19Q96LW7 228 aa13.88□□□□□ -0.19
DENND4A-206ENST00000564674 RNASE3P12724 160 aaKnown RBP13.88□□□□□ -0.19
DENND4A-206ENST00000564674 GATA3P23771 443 aa13.87□□□□□ -0.19
DENND4A-206ENST00000564674 CRIP2P52943 208 aaPredicted RBP13.87□□□□□ -0.19
DENND4A-206ENST00000564674 EBI3Q14213 229 aa13.87□□□□□ -0.19
DENND4A-206ENST00000564674 NDUFA11Q86Y39 141 aa13.87□□□□□ -0.19
DENND4A-206ENST00000564674 RNF223E7ERA6 249 aa13.87□□□□□ -0.19
DENND4A-206ENST00000564674 C1orf122Q6ZSJ8 110 aa13.87□□□□□ -0.19
DENND4A-206ENST00000564674 ZNF580Q9UK33 172 aa13.87□□□□□ -0.19
DENND4A-206ENST00000564674 TRBV7-1A0A0A6YYK4 115 aa13.86□□□□□ -0.19
DENND4A-206ENST00000564674 A0A0J9YY99 117 aa13.86□□□□□ -0.19
DENND4A-206ENST00000564674 IGHV4-39P01824 125 aa13.86□□□□□ -0.19
DENND4A-206ENST00000564674 CFC1BP0CG36 223 aa13.86□□□□□ -0.19
DENND4A-206ENST00000564674 CFC1P0CG37 223 aa13.86□□□□□ -0.19
DENND4A-206ENST00000564674 C9orf139Q6ZV77 190 aa13.86□□□□□ -0.19
DENND4A-206ENST00000564674 USP9YO00507 2555 aaPredicted RBP13.86□□□□□ -0.19
DENND4A-206ENST00000564674 IGHV3-73A0A0B4J1V6 119 aa13.86□□□□□ -0.19
DENND4A-206ENST00000564674 SDHAF1A6NFY7 115 aa13.86□□□□□ -0.19
DENND4A-206ENST00000564674 C9JAW5 83 aa13.86□□□□□ -0.19
DENND4A-206ENST00000564674 HERVK_113P61574 105 aa13.86□□□□□ -0.19
DENND4A-206ENST00000564674 RNASE13Q5GAN3 156 aaKnown RBP13.86□□□□□ -0.19
DENND4A-206ENST00000564674 FAM159AQ6UWV7 190 aa13.86□□□□□ -0.19
DENND4A-206ENST00000564674 ADORA2A-AS1P86434 159 aa13.85□□□□□ -0.19
DENND4A-206ENST00000564674 ZNF56Q15929 161 aa13.85□□□□□ -0.19
DENND4A-206ENST00000564674 NPFFO15130 113 aa13.85□□□□□ -0.19
DENND4A-206ENST00000564674 SUMO4Q6EEV6 95 aa13.85□□□□□ -0.19
DENND4A-206ENST00000564674 ZNRF2Q8NHG8 242 aa13.85□□□□□ -0.19
DENND4A-206ENST00000564674 AJUBAQ96IF1 538 aa13.85□□□□□ -0.19
DENND4A-206ENST00000564674 UBE2E1P51965 193 aa13.85□□□□□ -0.19
DENND4A-206ENST00000564674 ANKRD29Q8N6D5 301 aa13.85□□□□□ -0.19
DENND4A-206ENST00000564674 RHPN1-AS1Q9BWJ2 59 aa13.85□□□□□ -0.19
DENND4A-206ENST00000564674 IGLV4-69A0A075B6H9 119 aa13.84□□□□□ -0.19
DENND4A-206ENST00000564674 IGHV4-4A0A075B6R2 117 aa13.84□□□□□ -0.19
DENND4A-206ENST00000564674 PRSS2P07478 247 aa13.84□□□□□ -0.19
DENND4A-206ENST00000564674 LGALS3P17931 250 aaKnown RBP13.84□□□□□ -0.19
DENND4A-206ENST00000564674 SCGB1A1P11684 91 aa13.84□□□□□ -0.19
DENND4A-206ENST00000564674 Q6ZUT4 128 aa13.84□□□□□ -0.19
DENND4A-206ENST00000564674 C5orf56Q8N8D9 126 aa13.84□□□□□ -0.19
DENND4A-206ENST00000564674 KLK9Q9UKQ9 250 aa13.84□□□□□ -0.19
DENND4A-206ENST00000564674 A8MWV9 139 aa13.83□□□□□ -0.19
DENND4A-206ENST00000564674 UBE2D1P51668 147 aa13.83□□□□□ -0.19
DENND4A-206ENST00000564674 A4D1N5 150 aa13.83□□□□□ -0.2
DENND4A-206ENST00000564674 PRSS47A8MTI9 375 aa13.83□□□□□ -0.2
DENND4A-206ENST00000564674 COX6B1P14854 86 aa13.83□□□□□ -0.2
DENND4A-206ENST00000564674 BLCAPP62952 87 aa13.83□□□□□ -0.2
DENND4A-206ENST00000564674 OOSP1A8MZH6 123 aa13.83□□□□□ -0.2
DENND4A-206ENST00000564674 PMVKQ15126 192 aa13.83□□□□□ -0.2
DENND4A-206ENST00000564674 RNF183Q96D59 192 aa13.83□□□□□ -0.2
DENND4A-206ENST00000564674 ZNF688P0C7X2 276 aa13.82□□□□□ -0.2
DENND4A-206ENST00000564674 ITLN2Q8WWU7 325 aaPredicted RBP13.82□□□□□ -0.2
DENND4A-206ENST00000564674 LY6DQ14210 128 aa13.82□□□□□ -0.2
DENND4A-206ENST00000564674 TMEM95Q3KNT9 176 aa13.82□□□□□ -0.2
DENND4A-206ENST00000564674 J3QQQ9 107 aa13.81□□□□□ -0.2
DENND4A-206ENST00000564674 C11orf71Q6IPW1 123 aa13.81□□□□□ -0.2
DENND4A-206ENST00000564674 MDFICQ9P1T7 246 aa13.81□□□□□ -0.2
DENND4A-206ENST00000564674 U3KQE9 123 aa13.8□□□□□ -0.2
DENND4A-206ENST00000564674 CSMD2Q7Z408 3487 aa13.8□□□□□ -0.2
DENND4A-206ENST00000564674 PPDPFLQ8WWR9 84 aa13.8□□□□□ -0.2
DENND4A-206ENST00000564674 LRRK2Q5S007 2527 aa13.8□□□□□ -0.2
DENND4A-206ENST00000564674 OVOL1O14753 267 aa13.8□□□□□ -0.2
DENND4A-206ENST00000564674 TEN1Q86WV5 123 aa13.8□□□□□ -0.2
DENND4A-206ENST00000564674 SPXQ9BT56 116 aa13.8□□□□□ -0.2
DENND4A-206ENST00000564674 PRO1854Q9UHT4 67 aa13.8□□□□□ -0.2
DENND4A-206ENST00000564674 PTPN13Q12923 2485 aa13.8□□□□□ -0.2
DENND4A-206ENST00000564674 CEMP1Q6PRD7 247 aaPredicted RBP13.79□□□□□ -0.2
DENND4A-206ENST00000564674 POLQO75417 2590 aa13.79□□□□□ -0.2
DENND4A-206ENST00000564674 IGHV3-30P01768 117 aa13.79□□□□□ -0.2
DENND4A-206ENST00000564674 PRM2P04554 102 aa13.79□□□□□ -0.2
DENND4A-206ENST00000564674 IGHV3-30-5P0DP03 117 aa13.79□□□□□ -0.2
DENND4A-206ENST00000564674 FASNP49327 2511 aaKnown RBP13.79□□□□□ -0.2
DENND4A-206ENST00000564674 A0A0J9YXV3 536 aa13.79□□□□□ -0.2
DENND4A-206ENST00000564674 MRPL53Q96EL3 112 aaKnown RBP13.79□□□□□ -0.2
DENND4A-206ENST00000564674 DUX5Q96PT3 197 aa13.79□□□□□ -0.2
DENND4A-206ENST00000564674 IGIPA6NJ69 53 aa13.78□□□□□ -0.2
DENND4A-206ENST00000564674 ELANEP08246 267 aa13.78□□□□□ -0.2
DENND4A-206ENST00000564674 C10orf126Q8N4M7 172 aa13.78□□□□□ -0.2
DENND4A-206ENST00000564674 TRBV20-1A0A075B6N2 111 aa13.78□□□□□ -0.2
DENND4A-206ENST00000564674 CELSR2Q9HCU4 2923 aa13.78□□□□□ -0.2
DENND4A-206ENST00000564674 UBE2D3P61077 147 aa13.77□□□□□ -0.2
DENND4A-206ENST00000564674 UBE2D2P62837 147 aa13.77□□□□□ -0.2
DENND4A-206ENST00000564674 MUSTN1Q8IVN3 82 aa13.77□□□□□ -0.2
DENND4A-206ENST00000564674 VCYO14598 125 aa13.77□□□□□ -0.21
DENND4A-206ENST00000564674 SLC25A20O43772 301 aa13.77□□□□□ -0.21
DENND4A-206ENST00000564674 ANAPC13Q9BS18 74 aa13.77□□□□□ -0.21
DENND4A-206ENST00000564674 SS18L2Q9UHA2 77 aa13.77□□□□□ -0.21
DENND4A-206ENST00000564674 Q6ZSV7 163 aa13.77□□□□□ -0.21
DENND4A-206ENST00000564674 A8MZ25 164 aa13.76□□□□□ -0.21
DENND4A-206ENST00000564674 H3BUX3 64 aa13.76□□□□□ -0.21
DENND4A-206ENST00000564674 K7ENP7 123 aa13.76□□□□□ -0.21
DENND4A-206ENST00000564674 LINC00315P59091 139 aa13.76□□□□□ -0.21
DENND4A-206ENST00000564674 ZNF462Q96JM2 2506 aa13.76□□□□□ -0.21
DENND4A-206ENST00000564674 SPINK13Q1W4C9 94 aa13.76□□□□□ -0.21
DENND4A-206ENST00000564674 NTN5Q8WTR8 489 aaPredicted RBP13.76□□□□□ -0.21
DENND4A-206ENST00000564674 MOB4Q9Y3A3 225 aa13.76□□□□□ -0.21
DENND4A-206ENST00000564674 SETD2Q9BYW2 2564 aaPredicted RBP13.76□□□□□ -0.21
DENND4A-206ENST00000564674 P0DMU3 169 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms