RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 GATA1P15976 413 aaPredicted RBP4.84□□□□□ -1.63
CLK3-212ENST00000563418 TMEM223A0PJW6 202 aa4.84□□□□□ -1.63
CLK3-212ENST00000563418 SUMO4Q6EEV6 95 aa4.84□□□□□ -1.63
CLK3-212ENST00000563418 IGHV1OR15-1A0A075B7D0 117 aa4.84□□□□□ -1.63
CLK3-212ENST00000563418 CEP290O15078 2479 aa4.84□□□□□ -1.63
CLK3-212ENST00000563418 LECT2O14960 151 aa4.84□□□□□ -1.63
CLK3-212ENST00000563418 NSUN5P1Q3KNT7 163 aa4.84□□□□□ -1.63
CLK3-212ENST00000563418 ENHOQ6UWT2 76 aa4.84□□□□□ -1.63
CLK3-212ENST00000563418 IGKV1OR2-108A0A075B7D4 117 aa4.84□□□□□ -1.63
CLK3-212ENST00000563418 WI2-2373I1.2A0A1W2PRP0 233 aa4.84□□□□□ -1.63
CLK3-212ENST00000563418 COL4A3Q01955 1670 aa4.84□□□□□ -1.63
CLK3-212ENST00000563418 COL5A1P20908 1838 aaPredicted RBP4.84□□□□□ -1.63
CLK3-212ENST00000563418 INSP01308 110 aa4.84□□□□□ -1.64
CLK3-212ENST00000563418 MIFP14174 115 aa4.84□□□□□ -1.64
CLK3-212ENST00000563418 TRIP6Q15654 476 aaKnown RBP4.84□□□□□ -1.64
CLK3-212ENST00000563418 FAM110DQ8TAY7 271 aaPredicted RBP4.84□□□□□ -1.64
CLK3-212ENST00000563418 URB1-AS1Q96HZ7 61 aa4.84□□□□□ -1.64
CLK3-212ENST00000563418 RPL39LQ96EH5 51 aaKnown RBP4.83□□□□□ -1.64
CLK3-212ENST00000563418 SIRPDQ9H106 197 aa4.83□□□□□ -1.64
CLK3-212ENST00000563418 PYGO1Q9Y3Y4 419 aa4.83□□□□□ -1.64
CLK3-212ENST00000563418 IGHV3OR16-8A0A075B7F1 116 aa4.83□□□□□ -1.64
CLK3-212ENST00000563418 B3GALT5-AS1P59052 145 aa4.83□□□□□ -1.64
CLK3-212ENST00000563418 TRGV2A0A075B6R0 118 aa4.83□□□□□ -1.64
CLK3-212ENST00000563418 AKAP6Q13023 2319 aa4.83□□□□□ -1.64
CLK3-212ENST00000563418 CCL4P13236 92 aa4.83□□□□□ -1.64
CLK3-212ENST00000563418 C9orf47Q6ZRZ4 202 aa4.83□□□□□ -1.64
CLK3-212ENST00000563418 TRBV10-3A0A0K0K1G6 114 aa4.83□□□□□ -1.64
CLK3-212ENST00000563418 WDR86Q86TI4 376 aa4.83□□□□□ -1.64
CLK3-212ENST00000563418 SBSPONQ8IVN8 264 aa4.83□□□□□ -1.64
CLK3-212ENST00000563418 NREPQ16612 68 aa4.83□□□□□ -1.64
CLK3-212ENST00000563418 A0A0J9YXV3 536 aa4.83□□□□□ -1.64
CLK3-212ENST00000563418 IGHV1-18A0A0C4DH31 117 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 SPRNQ5BIV9 151 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 FAM19A3Q7Z5A8 133 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 NDPQ00604 133 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 IGKV3-20P01619 116 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 TIRAPP58753 221 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 IGHV1-46P01743 117 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 PIK3CD-AS1Q5SR53 167 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 A0A0G2JNJ9 132 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 Q9UFV3 132 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 LINC00322Q6ZN03 302 aaPredicted RBP4.82□□□□□ -1.64
CLK3-212ENST00000563418 ODF3Q96PU9 254 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 MSRB1Q9NZV6 116 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 NDUFA1O15239 70 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 DEFB109BQ30KR1 87 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 PLAC8L1A1L4L8 177 aa4.82□□□□□ -1.64
CLK3-212ENST00000563418 CMC4P56277 68 aaPredicted RBP4.82□□□□□ -1.64
CLK3-212ENST00000563418 C20orf203Q8NBC4 194 aa4.81□□□□□ -1.64
CLK3-212ENST00000563418 C4orf26Q17RF5 130 aa4.81□□□□□ -1.64
CLK3-212ENST00000563418 LINC01546A6NGU7 62 aa4.81□□□□□ -1.64
CLK3-212ENST00000563418 TFF1P04155 84 aa4.81□□□□□ -1.64
CLK3-212ENST00000563418 CRYGDP07320 174 aa4.81□□□□□ -1.64
CLK3-212ENST00000563418 XCL1P47992 114 aa4.81□□□□□ -1.64
CLK3-212ENST00000563418 COX7B2Q8TF08 81 aa4.81□□□□□ -1.64
CLK3-212ENST00000563418 XCL2Q9UBD3 114 aa4.81□□□□□ -1.64
CLK3-212ENST00000563418 TMEM178BH3BS89 294 aa4.81□□□□□ -1.64
CLK3-212ENST00000563418 I3L2K1 104 aa4.81□□□□□ -1.64
CLK3-212ENST00000563418 CD164Q04900 197 aa4.81□□□□□ -1.64
CLK3-212ENST00000563418 LPAL2Q16609 132 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 C7orf69Q9H7B7 122 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 NDUFA4O00483 81 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 LINC00308Q8TCZ7 52 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 RNF185Q96GF1 192 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 IGHV3OR16-12A0A075B7B8 117 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 TRBV7-6A0A0J9YX20 115 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 IGFL4Q6B9Z1 124 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 A6NED7 52 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 IGKV1-17P01599 117 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 NRACQ8N912 160 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 ZNF524Q96C55 264 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 ZNF71Q9NQZ8 489 aaPredicted RBP4.8□□□□□ -1.64
CLK3-212ENST00000563418 TRGV4A0A0C4DH28 118 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 CCL21O00585 134 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 RPL39P62891 51 aaKnown RBP4.8□□□□□ -1.64
CLK3-212ENST00000563418 HIGD2BQ4VC39 106 aa4.8□□□□□ -1.64
CLK3-212ENST00000563418 C17orf82Q86X59 251 aaPredicted RBP4.8□□□□□ -1.64
CLK3-212ENST00000563418 C17orf77Q96MU5 243 aa4.79□□□□□ -1.64
CLK3-212ENST00000563418 IGHV3-73A0A0B4J1V6 119 aa4.79□□□□□ -1.64
CLK3-212ENST00000563418 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.79□□□□□ -1.64
CLK3-212ENST00000563418 CDK2AP2O75956 126 aa4.79□□□□□ -1.64
CLK3-212ENST00000563418 PIP4P1Q86T03 277 aa4.79□□□□□ -1.64
CLK3-212ENST00000563418 KLK5Q9Y337 293 aaPredicted RBP4.79□□□□□ -1.64
CLK3-212ENST00000563418 IGLV2-11P01706 119 aa4.79□□□□□ -1.64
CLK3-212ENST00000563418 DKK1O94907 266 aa4.79□□□□□ -1.64
CLK3-212ENST00000563418 ZNF883P0CG24 379 aa4.79□□□□□ -1.64
CLK3-212ENST00000563418 COL4A5P29400 1685 aa4.79□□□□□ -1.64
CLK3-212ENST00000563418 IGHV4-4A0A075B6R2 117 aa4.79□□□□□ -1.64
CLK3-212ENST00000563418 BSPH1Q075Z2 132 aa4.79□□□□□ -1.64
CLK3-212ENST00000563418 RHPN1-AS1Q9BWJ2 59 aa4.79□□□□□ -1.64
CLK3-212ENST00000563418 IGKV1D-37A0A075B6S9 117 aa4.78□□□□□ -1.64
CLK3-212ENST00000563418 ZNF22P17026 224 aaPredicted RBP4.78□□□□□ -1.64
CLK3-212ENST00000563418 ESRGQ1W209 222 aa4.78□□□□□ -1.64
CLK3-212ENST00000563418 CRIP3Q6Q6R5 217 aa4.78□□□□□ -1.64
CLK3-212ENST00000563418 FREM1Q5H8C1 2179 aa4.78□□□□□ -1.64
CLK3-212ENST00000563418 CCKP06307 115 aa4.78□□□□□ -1.64
CLK3-212ENST00000563418 VMO1Q7Z5L0 202 aa4.78□□□□□ -1.64
CLK3-212ENST00000563418 RPP25Q9BUL9 199 aaKnown RBP4.78□□□□□ -1.64
CLK3-212ENST00000563418 Q9HAA7 133 aa4.78□□□□□ -1.64
CLK3-212ENST00000563418 PRR15LQ9BU68 103 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms