RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 SPTA1P02549 2419 aa9.74□□□□□ -0.85
USB1-207ENST00000563149 IGHV1OR15-1A0A075B7D0 117 aa9.73□□□□□ -0.85
USB1-207ENST00000563149 A0A087WWL8 130 aa9.73□□□□□ -0.85
USB1-207ENST00000563149 A0A0J9YY99 117 aa9.73□□□□□ -0.85
USB1-207ENST00000563149 NFE4Q86UQ8 179 aa9.73□□□□□ -0.85
USB1-207ENST00000563149 MED13LQ71F56 2210 aa9.73□□□□□ -0.85
USB1-207ENST00000563149 M0QY20 66 aa9.73□□□□□ -0.85
USB1-207ENST00000563149 SCGB1A1P11684 91 aa9.73□□□□□ -0.85
USB1-207ENST00000563149 EDN2P20800 178 aa9.73□□□□□ -0.85
USB1-207ENST00000563149 DLX4Q92988 240 aaPredicted RBP9.73□□□□□ -0.85
USB1-207ENST00000563149 MRPL16Q9NX20 251 aaKnown RBP9.73□□□□□ -0.85
USB1-207ENST00000563149 ABCA2Q9BZC7 2435 aa9.72□□□□□ -0.85
USB1-207ENST00000563149 CSMD1Q96PZ7 3565 aa9.72□□□□□ -0.85
USB1-207ENST00000563149 AGRNO00468 2067 aa9.72□□□□□ -0.85
USB1-207ENST00000563149 AVPP01185 164 aa9.72□□□□□ -0.85
USB1-207ENST00000563149 ZNF688P0C7X2 276 aa9.72□□□□□ -0.85
USB1-207ENST00000563149 RPL39P62891 51 aaKnown RBP9.72□□□□□ -0.85
USB1-207ENST00000563149 KLHL30-AS1Q8NEE0 82 aa9.72□□□□□ -0.85
USB1-207ENST00000563149 ATP6V0E2Q8NHE4 81 aa9.72□□□□□ -0.85
USB1-207ENST00000563149 ZNF256Q9Y2P7 627 aaPredicted RBP9.72□□□□□ -0.85
USB1-207ENST00000563149 CEP295Q9C0D2 2601 aa9.72□□□□□ -0.85
USB1-207ENST00000563149 TRGV11A0A075B6L2 103 aa9.71□□□□□ -0.85
USB1-207ENST00000563149 ZNF56Q15929 161 aa9.71□□□□□ -0.85
USB1-207ENST00000563149 AMTNQ6UX39 209 aa9.71□□□□□ -0.85
USB1-207ENST00000563149 SLC25A29Q8N8R3 303 aa9.71□□□□□ -0.85
USB1-207ENST00000563149 EDA2RQ9HAV5 297 aa9.71□□□□□ -0.85
USB1-207ENST00000563149 HIVEP3Q5T1R4 2406 aa9.71□□□□□ -0.86
USB1-207ENST00000563149 TMEM238C9JI98 176 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 J3QLI3 93 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 TMEM170BQ5T4T1 132 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 Q8N1Y9 231 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 SIGMAR1Q99720 223 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 MDFICQ9P1T7 246 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 TSPAN13O95857 204 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 ELANEP08246 267 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 UBE2D3P61077 147 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 UBE2D2P62837 147 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 DEFB112Q30KQ8 113 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 ETDBQ3ZM63 59 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 FAM74A4Q5TZK3 123 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 LINC01356Q8N9X3 169 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 ZNRF2Q8NHG8 242 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 WFDC12Q8WWY7 111 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 SPAG8Q99932 426 aaPredicted RBP9.7□□□□□ -0.86
USB1-207ENST00000563149 SPATA25Q9BR10 227 aa9.7□□□□□ -0.86
USB1-207ENST00000563149 GAGE12HA6NDE8 117 aa9.69□□□□□ -0.86
USB1-207ENST00000563149 I3L3M4 83 aa9.69□□□□□ -0.86
USB1-207ENST00000563149 J3QQQ9 107 aa9.69□□□□□ -0.86
USB1-207ENST00000563149 LEPROTO15243 131 aa9.69□□□□□ -0.86
USB1-207ENST00000563149 IGHV3-30P01768 117 aa9.69□□□□□ -0.86
USB1-207ENST00000563149 IGHV4-59P01825 116 aa9.69□□□□□ -0.86
USB1-207ENST00000563149 IGHV3-30-5P0DP03 117 aa9.69□□□□□ -0.86
USB1-207ENST00000563149 LGALS3P17931 250 aaKnown RBP9.69□□□□□ -0.86
USB1-207ENST00000563149 TMEM95Q3KNT9 176 aa9.69□□□□□ -0.86
USB1-207ENST00000563149 SH2D6Q7Z4S9 175 aa9.69□□□□□ -0.86
USB1-207ENST00000563149 NDUFA11Q86Y39 141 aa9.69□□□□□ -0.86
USB1-207ENST00000563149 TRBV20-1A0A075B6N2 111 aa9.68□□□□□ -0.86
USB1-207ENST00000563149 CFAP126Q5VTH2 177 aa9.68□□□□□ -0.86
USB1-207ENST00000563149 C20orf203Q8NBC4 194 aa9.68□□□□□ -0.86
USB1-207ENST00000563149 TSSC4Q9Y5U2 329 aaPredicted RBP9.68□□□□□ -0.86
USB1-207ENST00000563149 COL6A6A6NMZ7 2263 aa9.68□□□□□ -0.86
USB1-207ENST00000563149 TRAV12-2A0A075B6T6 113 aa9.68□□□□□ -0.86
USB1-207ENST00000563149 TMEM223A0PJW6 202 aa9.68□□□□□ -0.86
USB1-207ENST00000563149 EMP1P54849 157 aa9.68□□□□□ -0.86
USB1-207ENST00000563149 AMELXQ99217 191 aa9.68□□□□□ -0.86
USB1-207ENST00000563149 RELNP78509 3460 aa9.68□□□□□ -0.86
USB1-207ENST00000563149 APOMO95445 188 aa9.67□□□□□ -0.86
USB1-207ENST00000563149 P0DMU3 169 aa9.67□□□□□ -0.86
USB1-207ENST00000563149 FAM231AP0DMU4 169 aa9.67□□□□□ -0.86
USB1-207ENST00000563149 FAM231CP0DMU5 169 aa9.67□□□□□ -0.86
USB1-207ENST00000563149 CRYBA4P53673 196 aa9.67□□□□□ -0.86
USB1-207ENST00000563149 TSPEAR-AS2P59090 65 aa9.67□□□□□ -0.86
USB1-207ENST00000563149 SPINK13Q1W4C9 94 aa9.67□□□□□ -0.86
USB1-207ENST00000563149 UBE2E2Q96LR5 201 aa9.67□□□□□ -0.86
USB1-207ENST00000563149 CACNA1BQ00975 2339 aa9.66□□□□□ -0.86
USB1-207ENST00000563149 IGKV3-20P01619 116 aa9.66□□□□□ -0.86
USB1-207ENST00000563149 PYGO1Q9Y3Y4 419 aa9.66□□□□□ -0.86
USB1-207ENST00000563149 SPTBN1Q01082 2364 aaKnown RBP9.66□□□□□ -0.86
USB1-207ENST00000563149 LOC107984156A0A0G2JMH3 177 aa9.65□□□□□ -0.86
USB1-207ENST00000563149 A8MTW9 85 aa9.65□□□□□ -0.86
USB1-207ENST00000563149 CFC1BP0CG36 223 aa9.65□□□□□ -0.86
USB1-207ENST00000563149 CFC1P0CG37 223 aa9.65□□□□□ -0.86
USB1-207ENST00000563149 AZU1P20160 251 aa9.65□□□□□ -0.86
USB1-207ENST00000563149 PSMB2P49721 201 aa9.65□□□□□ -0.86
USB1-207ENST00000563149 SYNJ2BPP57105 145 aa9.65□□□□□ -0.86
USB1-207ENST00000563149 PIK3CD-AS1Q5SR53 167 aa9.65□□□□□ -0.86
USB1-207ENST00000563149 C10orf99Q6UWK7 81 aa9.65□□□□□ -0.86
USB1-207ENST00000563149 ARL17AQ8IVW1 177 aa9.65□□□□□ -0.86
USB1-207ENST00000563149 C10orf126Q8N4M7 172 aa9.65□□□□□ -0.86
USB1-207ENST00000563149 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.86
USB1-207ENST00000563149 NBASA2RRP1 2371 aa9.65□□□□□ -0.86
USB1-207ENST00000563149 FOXI1Q12951 378 aa9.65□□□□□ -0.87
USB1-207ENST00000563149 VCX2Q9H322 139 aa9.65□□□□□ -0.87
USB1-207ENST00000563149 PRO1854Q9UHT4 67 aa9.65□□□□□ -0.87
USB1-207ENST00000563149 IGF2RP11717 2491 aa9.64□□□□□ -0.87
USB1-207ENST00000563149 IGLV4-3A0A075B6K6 122 aa9.64□□□□□ -0.87
USB1-207ENST00000563149 TRAV2A0A0B4J234 112 aa9.64□□□□□ -0.87
USB1-207ENST00000563149 RHODO00212 210 aa9.64□□□□□ -0.87
USB1-207ENST00000563149 ZNF22P17026 224 aaPredicted RBP9.64□□□□□ -0.87
USB1-207ENST00000563149 PTH2Q96A98 100 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms