RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	PLAC8	Q9NZF1	115 aa		5.25	□□□□□ -1.57
CKLF-208	ENST00000563092	OR5AC2	Q9NZP5	309 aa		5.25	□□□□□ -1.57
CKLF-208	ENST00000563092	LPA	P08519	4548 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092		A0A087WYN8	130 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	CENPX	A8MT69	81 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	RHOD	O00212	210 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	PLA2G10	O15496	165 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	GCG	P01275	180 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	UBE2D3	P61077	147 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	UBE2D2	P62837	147 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	GNG5	P63218	68 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	MIA	Q16674	131 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	DNLZ	Q5SXM8	178 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	TRIQK	Q629K1	86 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	PQLC2	Q6ZP29	291 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	SUN5	Q8TC36	379 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	SPACA4	Q8TDM5	124 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	SEC22C	Q9BRL7	303 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	IL36B	Q9NZH7	164 aa		5.24	□□□□□ -1.57
CKLF-208	ENST00000563092	TRBV6-8	A0A0A6YYG3	113 aa		5.23	□□□□□ -1.57
CKLF-208	ENST00000563092	TRBV10-1	A0A0K0K1A3	114 aa		5.23	□□□□□ -1.57
CKLF-208	ENST00000563092	C17orf112	F2Z3M2	114 aa		5.23	□□□□□ -1.57
CKLF-208	ENST00000563092	TCRB	P04435	133 aa		5.23	□□□□□ -1.57
CKLF-208	ENST00000563092	TCRA	P04437	139 aa		5.23	□□□□□ -1.57
CKLF-208	ENST00000563092	IL7	P13232	177 aa		5.23	□□□□□ -1.57
CKLF-208	ENST00000563092	MPV17L2	Q567V2	206 aa		5.23	□□□□□ -1.57
CKLF-208	ENST00000563092	CLRN3	Q8NCR9	226 aa		5.23	□□□□□ -1.57
CKLF-208	ENST00000563092	OR10G8	Q8NGN5	311 aa		5.23	□□□□□ -1.57
CKLF-208	ENST00000563092	SGK494	Q96LW2	274 aa		5.23	□□□□□ -1.57
CKLF-208	ENST00000563092	NDFIP1	Q9BT67	221 aa		5.23	□□□□□ -1.57
CKLF-208	ENST00000563092	RBM38	Q9H0Z9	239 aa	Known RBP	5.23	□□□□□ -1.57
CKLF-208	ENST00000563092	PSG8	Q9UQ74	426 aa		5.23	□□□□□ -1.57
CKLF-208	ENST00000563092	MUC2	Q02817	5179 aa		5.22	□□□□□ -1.57
CKLF-208	ENST00000563092	TRBV7-3	A0A075B6L6	115 aa		5.22	□□□□□ -1.57
CKLF-208	ENST00000563092		H0YIZ8	118 aa		5.22	□□□□□ -1.57
CKLF-208	ENST00000563092	PHOX2A	O14813	284 aa		5.22	□□□□□ -1.57
CKLF-208	ENST00000563092	NOL3	O60936	208 aa	Known RBP	5.22	□□□□□ -1.57
CKLF-208	ENST00000563092	EIF3G	O75821	320 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
CKLF-208	ENST00000563092	SLPI	P03973	132 aa		5.22	□□□□□ -1.57
CKLF-208	ENST00000563092	LGALSL	Q3ZCW2	172 aa	Predicted RBP	5.22	□□□□□ -1.57
CKLF-208	ENST00000563092	SMUG1	Q53HV7	270 aa		5.22	□□□□□ -1.57
CKLF-208	ENST00000563092	WDR73	Q6P4I2	378 aa		5.22	□□□□□ -1.57
CKLF-208	ENST00000563092	C15orf54	Q8N8G6	183 aa		5.22	□□□□□ -1.57
CKLF-208	ENST00000563092	C5orf17	Q8NAS9	161 aa		5.22	□□□□□ -1.57
CKLF-208	ENST00000563092	OR2G3	Q8NGZ4	309 aa		5.22	□□□□□ -1.57
CKLF-208	ENST00000563092	SFRP2	Q96HF1	295 aa		5.22	□□□□□ -1.57
CKLF-208	ENST00000563092	HLA-DQA1	P01909	254 aa		5.21	□□□□□ -1.58
CKLF-208	ENST00000563092	CRP	P02741	224 aa		5.21	□□□□□ -1.58
CKLF-208	ENST00000563092	PRR3	P79522	188 aa	Known RBP	5.21	□□□□□ -1.58
CKLF-208	ENST00000563092	FLI1	Q01543	452 aa	Predicted RBP	5.21	□□□□□ -1.58
CKLF-208	ENST00000563092	KCNIP4	Q6PIL6	250 aa		5.21	□□□□□ -1.58
CKLF-208	ENST00000563092	NUDT15	Q9NV35	164 aa		5.21	□□□□□ -1.58
CKLF-208	ENST00000563092	KIF25-AS1	Q9Y6Z4	181 aa		5.21	□□□□□ -1.58
CKLF-208	ENST00000563092	IGHV3-64	A0A075B6Q5	118 aa		5.2	□□□□□ -1.58
CKLF-208	ENST00000563092	TRAV6	A0A075B6T7	132 aa		5.2	□□□□□ -1.58
CKLF-208	ENST00000563092	LYRM1	O43325	122 aa		5.2	□□□□□ -1.58
CKLF-208	ENST00000563092	ANG	P03950	147 aa	Known RBP	5.2	□□□□□ -1.58
CKLF-208	ENST00000563092	CHTF8	P0CG12	524 aa		5.2	□□□□□ -1.58
CKLF-208	ENST00000563092	RPL36A	P83881	106 aa	Known RBP	5.2	□□□□□ -1.58
CKLF-208	ENST00000563092	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
CKLF-208	ENST00000563092	SAPCD1	Q5SSQ6	148 aa		5.2	□□□□□ -1.58
CKLF-208	ENST00000563092	PRR27	Q6MZM9	219 aa		5.2	□□□□□ -1.58
CKLF-208	ENST00000563092	COX8C	Q7Z4L0	72 aa		5.2	□□□□□ -1.58
CKLF-208	ENST00000563092	RPL36AL	Q969Q0	106 aa	Known RBP	5.2	□□□□□ -1.58
CKLF-208	ENST00000563092	EPDR1	Q9UM22	224 aa		5.2	□□□□□ -1.58
CKLF-208	ENST00000563092	FABP5P3	A8MUU1	101 aa		5.19	□□□□□ -1.58
CKLF-208	ENST00000563092	KRBOX1	C9JBD0	128 aa		5.19	□□□□□ -1.58
CKLF-208	ENST00000563092	TMEM262	E9PQX1	116 aa		5.19	□□□□□ -1.58
CKLF-208	ENST00000563092	ARMS2	P0C7Q2	107 aa		5.19	□□□□□ -1.58
CKLF-208	ENST00000563092	S100A4	P26447	101 aa	Known RBP	5.19	□□□□□ -1.58
CKLF-208	ENST00000563092	PKIA	P61925	76 aa		5.19	□□□□□ -1.58
CKLF-208	ENST00000563092	ZFP69	Q49AA0	526 aa		5.19	□□□□□ -1.58
CKLF-208	ENST00000563092	NTM-AS1	Q6ZSK4	140 aa		5.19	□□□□□ -1.58
CKLF-208	ENST00000563092	DPH3P1	Q9H4G8	78 aa		5.19	□□□□□ -1.58
CKLF-208	ENST00000563092		A0A087WWL8	130 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092		H3BVH4	76 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092		K7EQM0	130 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092	STAG3L2	P0CL84	134 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092	STAG3L3	P0CL85	134 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092	ARL14EPL	P0DKL9	152 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092	CRIP1	P50238	77 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092	RAB2A	P61019	212 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092	RBX1	P62877	108 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092	FAM74A4	Q5TZK3	123 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092	SPINK6	Q6UWN8	80 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092	PRNT	Q86SH4	94 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092	NEXN-AS1	Q8NBZ9	246 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092	OR11H4	Q8NGC9	324 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092	C7orf33	Q8WU49	177 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092	VAX2	Q9UIW0	290 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092	HSPB11	Q9Y547	144 aa		5.18	□□□□□ -1.58
CKLF-208	ENST00000563092		A0A1W2PPV4	95 aa		5.17	□□□□□ -1.58
CKLF-208	ENST00000563092	hDV102S1	A0JD36	115 aa		5.17	□□□□□ -1.58
CKLF-208	ENST00000563092		B4DEV8	164 aa		5.17	□□□□□ -1.58
CKLF-208	ENST00000563092	PTTG1	O95997	202 aa		5.17	□□□□□ -1.58
CKLF-208	ENST00000563092	SUMO1	P63165	101 aa	Known RBP	5.17	□□□□□ -1.58
CKLF-208	ENST00000563092	REG3G	Q6UW15	175 aa		5.17	□□□□□ -1.58
CKLF-208	ENST00000563092	LINC00269	Q8N2A0	174 aa		5.17	□□□□□ -1.58
CKLF-208	ENST00000563092	WFDC1	Q9HC57	220 aa		5.17	□□□□□ -1.58
CKLF-208	ENST00000563092	ARL2-SNX15	V9GYD0	113 aa		5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms