RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 TMEM183BQ1AE95 376 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 C12orf74Q32Q52 190 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 TDRG1Q3Y452 100 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 TMEM78Q5T7P6 136 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
SMG1-206ENST00000562668 Q86TA4 180 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 IQCF2Q8IXL9 164 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 TMEM256Q8N2U0 113 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 ZNF680Q8NEM1 530 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 CMTM2Q8TAZ6 248 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 HIST1H2BAQ96A08 127 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 TCEAL7Q9BRU2 100 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 NKX6-2Q9C056 277 aaPredicted RBP3.16□□□□□ -1.9
SMG1-206ENST00000562668 PARLQ9H300 379 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 GSN-AS1Q9NRJ2 163 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 RPH3ALQ9UNE2 315 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 EPPK1P58107 5090 aaKnown RBP3.15□□□□□ -1.91
SMG1-206ENST00000562668 TRBV20OR9-2A0A075B6H5 130 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 IGHV3OR16-12A0A075B7B8 117 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 FBLL1A6NHQ2 334 aaKnown RBP3.15□□□□□ -1.91
SMG1-206ENST00000562668 SNURFLB1AK76 121 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 C11orf94C9JXX5 98 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 F6UZH7 168 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 H7BYZ3 331 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 LTAP01374 205 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 HBE1P02100 147 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 GPX1P07203 203 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 BCL2P10415 239 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 RNASE4P34096 147 aaKnown RBP3.15□□□□□ -1.91
SMG1-206ENST00000562668 PPT1P50897 306 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 MEF2BQ02080 365 aaPredicted RBP3.15□□□□□ -1.91
SMG1-206ENST00000562668 ZNF506Q5JVG8 444 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 MUC7Q8TAX7 377 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 TMEM263Q8WUH6 116 aaKnown RBP3.15□□□□□ -1.91
SMG1-206ENST00000562668 PCNPQ8WW12 178 aaKnown RBP3.15□□□□□ -1.91
SMG1-206ENST00000562668 ZC2HC1AQ96GY0 325 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 FAM218AQ96MZ4 157 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 DERL1Q9BUN8 251 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 MANBALQ9NQG1 85 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 GNG13Q9P2W3 67 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 GOLT1BQ9Y3E0 138 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 KMT2AQ03164 3969 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 FAT2Q9NYQ8 4349 aa3.15□□□□□ -1.91
SMG1-206ENST00000562668 DNAH11Q96DT5 4516 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 IGHV1OR15-1A0A075B7D0 117 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 RBFOX3A6NFN3 312 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 C9JQL5 133 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 K7EQD1 137 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 SPINK4O60575 86 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 NDUFS6O75380 124 aaKnown RBP3.14□□□□□ -1.91
SMG1-206ENST00000562668 GCGP01275 180 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 IFNA7P01567 189 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 TYMSP04818 313 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 PFN1P07737 140 aaKnown RBP3.14□□□□□ -1.91
SMG1-206ENST00000562668 RPL35P42766 123 aaKnown RBP3.14□□□□□ -1.91
SMG1-206ENST00000562668 RRN3P1Q2M238 152 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 ZNF674Q2M3X9 581 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 SAPCD1Q5SSQ6 148 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 CASC10Q5T4H9 136 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 FAM222AQ5U5X8 452 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 CST9LP1Q5W188 147 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 ZNF493Q6ZR52 646 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 PRNTQ86SH4 94 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 TMEM183AQ8IXX5 376 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 EIF4E3Q8N5X7 224 aaKnown RBP3.14□□□□□ -1.91
SMG1-206ENST00000562668 C16orf74Q96GX8 76 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 FMC1Q96HJ9 113 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 C2orf48Q96LS8 159 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 FAM210AQ96ND0 272 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 LINC01587Q99440 93 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 TXNDC17Q9BRA2 123 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 NIPSNAP3BQ9BS92 247 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 TREM1Q9NP99 234 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 VAX2Q9UIW0 290 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 ZFP30Q9Y2G7 519 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 MUC4Q99102 2169 aa3.14□□□□□ -1.91
SMG1-206ENST00000562668 TRAV21A0A0B4J279 112 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 IGHV3-16A0A0C4DH30 117 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 RAB19A4D1S5 217 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 TMEM189A5PLL7 270 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 C19orf71A6NCJ1 209 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 LYRM9A8MSI8 78 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 C3orf84H3BNL1 204 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 TEX46H3BTG2 121 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 K7EN84 100 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 K7EQM0 130 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 GNRH2O43555 120 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 S100A9P06702 114 aaKnown RBP3.13□□□□□ -1.91
SMG1-206ENST00000562668 SRP19P09132 144 aaKnown RBP3.13□□□□□ -1.91
SMG1-206ENST00000562668 RNASE3P12724 160 aaKnown RBP3.13□□□□□ -1.91
SMG1-206ENST00000562668 TAGLN2P37802 199 aaKnown RBP3.13□□□□□ -1.91
SMG1-206ENST00000562668 AKR1C3P42330 323 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 TCL1AP56279 114 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 DAZ2Q13117 558 aaKnown RBP3.13□□□□□ -1.91
SMG1-206ENST00000562668 SMUG1Q53HV7 270 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 MUC21Q5SSG8 566 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 DNLZQ5SXM8 178 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 IBA57Q5T440 356 aaKnown RBP3.13□□□□□ -1.91
SMG1-206ENST00000562668 ZFAND6Q6FIF0 208 aa3.13□□□□□ -1.91
SMG1-206ENST00000562668 ZNF767PQ75MW2 155 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms