RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 GTSF1Q8WW33 167 aa11.62□□□□□ -0.55
KATNB1-202ENST00000562542 TRBV7-3A0A075B6L6 115 aa11.61□□□□□ -0.55
KATNB1-202ENST00000562542 TRBV10-1A0A0K0K1A3 114 aa11.61□□□□□ -0.55
KATNB1-202ENST00000562542 CNBPP62633 177 aaKnown RBP11.61□□□□□ -0.55
KATNB1-202ENST00000562542 FLI1Q01543 452 aaPredicted RBP11.61□□□□□ -0.55
KATNB1-202ENST00000562542 C5orf17Q8NAS9 161 aa11.61□□□□□ -0.55
KATNB1-202ENST00000562542 OR11H4Q8NGC9 324 aa11.61□□□□□ -0.55
KATNB1-202ENST00000562542 SCGB1C1Q8TD33 95 aa11.61□□□□□ -0.55
KATNB1-202ENST00000562542 AP5S1Q9NUS5 200 aa11.61□□□□□ -0.55
KATNB1-202ENST00000562542 NUDT15Q9NV35 164 aa11.61□□□□□ -0.55
KATNB1-202ENST00000562542 IL36BQ9NZH7 164 aa11.61□□□□□ -0.55
KATNB1-202ENST00000562542 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.6□□□□□ -0.55
KATNB1-202ENST00000562542 CCDC160A6NGH7 325 aa11.6□□□□□ -0.55
KATNB1-202ENST00000562542 HMGB3O15347 200 aaKnown RBP11.6□□□□□ -0.55
KATNB1-202ENST00000562542 PTTG1O95997 202 aa11.6□□□□□ -0.55
KATNB1-202ENST00000562542 TCRBP04435 133 aa11.6□□□□□ -0.55
KATNB1-202ENST00000562542 KRTAP10-8P60410 259 aa11.6□□□□□ -0.55
KATNB1-202ENST00000562542 PKIAP61925 76 aa11.6□□□□□ -0.55
KATNB1-202ENST00000562542 PRR3P79522 188 aaKnown RBP11.6□□□□□ -0.55
KATNB1-202ENST00000562542 LRRC37A5PQ49AS3 106 aa11.6□□□□□ -0.55
KATNB1-202ENST00000562542 REG3GQ6UW15 175 aa11.6□□□□□ -0.55
KATNB1-202ENST00000562542 IL7P13232 177 aa11.59□□□□□ -0.55
KATNB1-202ENST00000562542 PLAC8Q9NZF1 115 aa11.59□□□□□ -0.55
KATNB1-202ENST00000562542 B4DEV8 164 aa11.58□□□□□ -0.56
KATNB1-202ENST00000562542 SAPCD1Q5SSQ6 148 aa11.58□□□□□ -0.56
KATNB1-202ENST00000562542 LINC00269Q8N2A0 174 aa11.58□□□□□ -0.56
KATNB1-202ENST00000562542 SDHCQ99643 169 aaPredicted RBP11.58□□□□□ -0.56
KATNB1-202ENST00000562542 ARMS2P0C7Q2 107 aa11.57□□□□□ -0.56
KATNB1-202ENST00000562542 KRTAP26-1Q6PEX3 210 aa11.57□□□□□ -0.56
KATNB1-202ENST00000562542 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.57□□□□□ -0.56
KATNB1-202ENST00000562542 SFRP2Q96HF1 295 aa11.57□□□□□ -0.56
KATNB1-202ENST00000562542 IGLV10-54A0A075B6I4 117 aa11.56□□□□□ -0.56
KATNB1-202ENST00000562542 FABP5P3A8MUU1 101 aa11.56□□□□□ -0.56
KATNB1-202ENST00000562542 M0R381 172 aa11.56□□□□□ -0.56
KATNB1-202ENST00000562542 LYRM1O43325 122 aa11.56□□□□□ -0.56
KATNB1-202ENST00000562542 ARL14EPLP0DKL9 152 aa11.56□□□□□ -0.56
KATNB1-202ENST00000562542 PRR34Q9NV39 138 aa11.56□□□□□ -0.56
KATNB1-202ENST00000562542 PHLDA3Q9Y5J5 127 aa11.56□□□□□ -0.56
KATNB1-202ENST00000562542 RAB2AP61019 212 aa11.55□□□□□ -0.56
KATNB1-202ENST00000562542 SMIM3Q9BZL3 60 aa11.55□□□□□ -0.56
KATNB1-202ENST00000562542 GRIFINA4D1Z8 144 aa11.54□□□□□ -0.56
KATNB1-202ENST00000562542 M0R036 132 aa11.54□□□□□ -0.56
KATNB1-202ENST00000562542 PLA2G10O15496 165 aa11.54□□□□□ -0.56
KATNB1-202ENST00000562542 SIX6O95475 246 aa11.54□□□□□ -0.56
KATNB1-202ENST00000562542 H2AFB2P0C5Z0 115 aa11.54□□□□□ -0.56
KATNB1-202ENST00000562542 RBX1P62877 108 aa11.54□□□□□ -0.56
KATNB1-202ENST00000562542 SPINK6Q6UWN8 80 aa11.54□□□□□ -0.56
KATNB1-202ENST00000562542 LYPD6BQ8NI32 183 aa11.54□□□□□ -0.56
KATNB1-202ENST00000562542 EPDR1Q9UM22 224 aa11.54□□□□□ -0.56
KATNB1-202ENST00000562542 H0YIZ8 118 aa11.53□□□□□ -0.56
KATNB1-202ENST00000562542 TPT1P13693 172 aaKnown RBP11.53□□□□□ -0.56
KATNB1-202ENST00000562542 SUMO1P63165 101 aaKnown RBP11.53□□□□□ -0.56
KATNB1-202ENST00000562542 GAGE6Q13070 117 aa11.53□□□□□ -0.56
KATNB1-202ENST00000562542 MAJINQ3KP22 176 aa11.53□□□□□ -0.56
KATNB1-202ENST00000562542 OR10G8Q8NGN5 311 aa11.53□□□□□ -0.56
KATNB1-202ENST00000562542 LPAP08519 4548 aa11.53□□□□□ -0.56
KATNB1-202ENST00000562542 SLPIP03973 132 aa11.52□□□□□ -0.57
KATNB1-202ENST00000562542 ARL2-SNX15V9GYD0 113 aa11.52□□□□□ -0.57
KATNB1-202ENST00000562542 TRAV34A0A0B4J273 112 aa11.51□□□□□ -0.57
KATNB1-202ENST00000562542 IGKV2-24A0A0C4DH68 120 aa11.51□□□□□ -0.57
KATNB1-202ENST00000562542 KRBOX1C9JBD0 128 aa11.51□□□□□ -0.57
KATNB1-202ENST00000562542 COX6A2Q02221 97 aa11.51□□□□□ -0.57
KATNB1-202ENST00000562542 REG3AQ06141 175 aa11.51□□□□□ -0.57
KATNB1-202ENST00000562542 ZNF56Q15929 161 aa11.51□□□□□ -0.57
KATNB1-202ENST00000562542 ZFP82Q8N141 532 aa11.51□□□□□ -0.57
KATNB1-202ENST00000562542 NEXN-AS1Q8NBZ9 246 aa11.51□□□□□ -0.57
KATNB1-202ENST00000562542 HSPB11Q9Y547 144 aa11.51□□□□□ -0.57
KATNB1-202ENST00000562542 DNLZQ5SXM8 178 aa11.5□□□□□ -0.57
KATNB1-202ENST00000562542 RBM38Q9H0Z9 239 aaKnown RBP11.5□□□□□ -0.57
KATNB1-202ENST00000562542 GCHFRP30047 84 aa11.49□□□□□ -0.57
KATNB1-202ENST00000562542 CDC34P49427 236 aaPredicted RBP11.49□□□□□ -0.57
KATNB1-202ENST00000562542 RAB5CP51148 216 aa11.49□□□□□ -0.57
KATNB1-202ENST00000562542 RAB4BP61018 213 aa11.49□□□□□ -0.57
KATNB1-202ENST00000562542 TMEM97Q5BJF2 176 aa11.49□□□□□ -0.57
KATNB1-202ENST00000562542 STPG4Q8N801 248 aa11.49□□□□□ -0.57
KATNB1-202ENST00000562542 TMSB15BA0A087X1C1 80 aa11.48□□□□□ -0.57
KATNB1-202ENST00000562542 KRTAP9-6A0A140TA67 174 aa11.48□□□□□ -0.57
KATNB1-202ENST00000562542 NTM-AS1Q6ZSK4 140 aa11.48□□□□□ -0.57
KATNB1-202ENST00000562542 DERL1Q9BUN8 251 aa11.48□□□□□ -0.57
KATNB1-202ENST00000562542 TRBV25-1A0A075B6N4 114 aa11.47□□□□□ -0.57
KATNB1-202ENST00000562542 MUC21A0A0G2JKD1 596 aa11.47□□□□□ -0.57
KATNB1-202ENST00000562542 STAG3L2P0CL84 134 aa11.47□□□□□ -0.57
KATNB1-202ENST00000562542 STAG3L3P0CL85 134 aa11.47□□□□□ -0.57
KATNB1-202ENST00000562542 TRAV8-4A0A0B4J246 113 aa11.46□□□□□ -0.57
KATNB1-202ENST00000562542 A0A0U1RQV1 116 aa11.46□□□□□ -0.57
KATNB1-202ENST00000562542 SH2D1AO60880 128 aa11.46□□□□□ -0.57
KATNB1-202ENST00000562542 NDUFS6O75380 124 aaKnown RBP11.46□□□□□ -0.57
KATNB1-202ENST00000562542 P01737 135 aa11.46□□□□□ -0.57
KATNB1-202ENST00000562542 CYCSP99999 105 aaKnown RBP11.46□□□□□ -0.57
KATNB1-202ENST00000562542 FAM240BA0A1B0GVZ2 78 aa11.45□□□□□ -0.58
KATNB1-202ENST00000562542 IFNA7P01567 189 aa11.45□□□□□ -0.58
KATNB1-202ENST00000562542 RPL12P30050 165 aaKnown RBP11.45□□□□□ -0.58
KATNB1-202ENST00000562542 CRIP1P50238 77 aa11.45□□□□□ -0.58
KATNB1-202ENST00000562542 Q86TA4 180 aa11.45□□□□□ -0.58
KATNB1-202ENST00000562542 PRSS3P2Q8NHM4 247 aa11.45□□□□□ -0.58
KATNB1-202ENST00000562542 RAB24Q969Q5 203 aa11.45□□□□□ -0.58
KATNB1-202ENST00000562542 TMEM167BQ9NRX6 74 aa11.45□□□□□ -0.58
KATNB1-202ENST00000562542 TRBV6-1A0A0K0K1D8 114 aa11.44□□□□□ -0.58
KATNB1-202ENST00000562542 F5H697 171 aa11.44□□□□□ -0.58
KATNB1-202ENST00000562542 RPS10P46783 165 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms