RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 SCXQ7RTU7 201 aa10.96□□□□□ -0.65
VPS9D1-AS1-201ENST00000562298 COX8CQ7Z4L0 72 aa10.96□□□□□ -0.65
VPS9D1-AS1-201ENST00000562298 COX11Q9Y6N1 276 aa10.96□□□□□ -0.65
VPS9D1-AS1-201ENST00000562298 A0A087WWL8 130 aa10.95□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 SYT8Q8NBV8 401 aa10.95□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 OR11H4Q8NGC9 324 aa10.95□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 HIST1H2BAQ96A08 127 aa10.95□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 SFRP2Q96HF1 295 aa10.95□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 URGCP-MRPS24S4R325 110 aa10.95□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 IGKV2D-24A0A075B6R9 120 aa10.94□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 KRTAP29-1A8MX34 341 aaPredicted RBP10.94□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 GIPP09681 153 aaPredicted RBP10.94□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 INO80EQ8NBZ0 244 aaPredicted RBP10.94□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 KLK12Q9UKR0 248 aa10.94□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 BORCS7-ASMTA0A0B4J1R7 106 aa10.93□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 RBFOX3A6NFN3 312 aa10.93□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 PTTG1O95997 202 aa10.93□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 FAM162BQ5T6X4 162 aa10.93□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 Q8N976 141 aa10.93□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 DEFB104AQ8WTQ1 72 aa10.93□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 RMI2Q96E14 147 aa10.93□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 NKX6-2Q9C056 277 aaPredicted RBP10.93□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 ZFP30Q9Y2G7 519 aa10.93□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 PHLDA3Q9Y5J5 127 aa10.93□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 FAT3Q8TDW7 4589 aa10.93□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 HMCN2Q8NDA2 5059 aa10.92□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 FXYD6-FXYD2A0A087WZ82 144 aa10.92□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 TMSB15BA0A087X1C1 80 aa10.92□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 M0R381 172 aa10.92□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 KRTAP10-4P60372 401 aaPredicted RBP10.92□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 ZNF674Q2M3X9 581 aa10.92□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 UBE2WQ96B02 151 aa10.92□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 FMC1Q96HJ9 113 aa10.92□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 UBE2D3P61077 147 aa10.91□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 UBE2D2P62837 147 aa10.91□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 LINC01559Q495D7 138 aa10.91□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 ATRAIDQ6UW56 229 aa10.91□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 A0A087WX48 190 aa10.9□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 TRBV10-1A0A0K0K1A3 114 aa10.9□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 MAP1LC3B2A6NCE7 125 aa10.9□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 LTAP01374 205 aa10.9□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 SEC11BP0C7V7 166 aa10.9□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 TPT1P13693 172 aaKnown RBP10.9□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 UBE2G1P62253 170 aa10.9□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 AKR1C8PQ5T2L2 129 aa10.9□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 CHCHD7Q9BUK0 85 aa10.9□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 CHAC1Q9BUX1 264 aa10.9□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 MAP1LC3BQ9GZQ8 125 aa10.9□□□□□ -0.66
VPS9D1-AS1-201ENST00000562298 PKHD1L1Q86WI1 4243 aa10.89□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 TRBV7-3A0A075B6L6 115 aa10.89□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 TRBV6-1A0A0K0K1D8 114 aa10.89□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 G3V3Q6 166 aa10.89□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 RPL36AP83881 106 aaKnown RBP10.89□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 ZFP82Q8N141 532 aa10.89□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 CIRBP-AS1Q8TBR5 109 aa10.89□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 RPL36ALQ969Q0 106 aaKnown RBP10.89□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 ELOBQ15370 118 aa10.88□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 ENHOQ6UWT2 76 aa10.87□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 OR10G8Q8NGN5 311 aa10.87□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 CYTL1Q9NRR1 136 aa10.87□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 FHITP49789 147 aa10.86□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 Q0VG73 95 aa10.86□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 CST9LP1Q5W188 147 aa10.86□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 KCNIP4Q6PIL6 250 aa10.86□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 TCEAL7Q9BRU2 100 aa10.86□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 TRBV6-8A0A0A6YYG3 113 aa10.85□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 AKR1C3P42330 323 aa10.85□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 RPL19P84098 196 aaKnown RBP10.85□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 MPV17L2Q567V2 206 aa10.85□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 NEXN-AS1Q8NBZ9 246 aa10.85□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 OR10AG1Q8NH19 301 aa10.85□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 C1orf43Q9BWL3 253 aa10.85□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 TMEM262E9PQX1 116 aa10.84□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 ARPC5O15511 151 aa10.84□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 RAB4BP61018 213 aa10.84□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 PRR27Q6MZM9 219 aa10.84□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 C15orf54Q8N8G6 183 aa10.84□□□□□ -0.67
VPS9D1-AS1-201ENST00000562298 PAGE4O60829 102 aa10.83□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 ZNF56Q15929 161 aa10.83□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 STOML3Q8TAV4 291 aa10.83□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 IGLV2-8P01709 118 aa10.82□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 CRPP02741 224 aa10.82□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 C14orf177Q52M58 125 aa10.82□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 MLST8Q9BVC4 326 aa10.82□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 BATF3Q9NR55 127 aa10.82□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 MUC21A0A0G2JKD1 596 aa10.81□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 MUC21A0A140T8X8 626 aa10.81□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 SNAI2O43623 268 aa10.81□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 ANGP03950 147 aaKnown RBP10.81□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 CXCL1P09341 107 aa10.81□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 SSBP4Q9BWG4 385 aaPredicted RBP10.81□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 UBR4Q5T4S7 5183 aa10.8□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 SCO2A0A1W2PP80 73 aa10.8□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 USP17L23D6RBM5 183 aa10.8□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 HLA-DQA1P01909 254 aa10.8□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 NTM-AS1Q6ZSK4 140 aa10.8□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 CHCHD5Q9BSY4 110 aa10.8□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 ZNF471Q9BX82 626 aaPredicted RBP10.8□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 OXTP01178 125 aa10.79□□□□□ -0.68
VPS9D1-AS1-201ENST00000562298 A0A1B0GV50 99 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms